Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G123400 Carya illinoinensis HOM05D000251 ORTHO05D007889 4.9e-64 247.7 126 100.0
CiPaw.15G123200 Carya illinoinensis HOM05D000251 ORTHO05D007889 9.8e-41 170.2 91 94.5
Cfa019845 Carpinus fangiana HOM05D000251 ORTHO05D007889 3.5e-38 161.8 91 87.9
Haze_18572 Corylus avellana HOM05D000251 ORTHO05D007889 7.8e-38 160.6 91 86.8
Manes.05G117300 Manihot esculenta HOM05D000251 ORTHO05D007889 7.8e-38 160.6 91 87.9
QL10p022316 Quercus lobata HOM05D000251 ORTHO05D007889 7.8e-38 160.6 91 86.8
Potri.012G058100 Populus trichocarpa HOM05D000251 ORTHO05D007889 8.6e-37 157.1 90 85.6
Sabra12G0041800 Salix brachista HOM05D000251 ORTHO05D007889 3.3e-36 155.2 90 84.4
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 9.5e-36 153.7 90 85.6
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 9.5e-36 153.7 91 84.6
Lj9C433G11 Lonicera japonica HOM05D000251 ORTHO05D007889 1.2e-35 153.3 91 83.5
Hma1.2p1_0595F.1_g186100 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 1.6e-35 152.9 91 82.4
TAR622G0769 Trochodendron aralioides HOM05D000251 ORTHO05D007889 3.6e-35 151.8 90 82.2
Rhsim08G0139200 Rhododendron simsii HOM05D000251 ORTHO05D007889 4.7e-35 151.4 91 81.3
MD14G1219700 Malus domestica HOM05D000251 ORTHO05D007889 6.2e-35 151.0 91 82.4
Nn4g23656 Nelumbo nucifera HOM05D000251 ORTHO05D007889 6.2e-35 151.0 92 79.3
CSS0040641 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D007889 8.1e-35 150.6 91 82.4
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 1.8e-34 149.4 91 80.2
Atru.chr9.705 Acer truncatum HOM05D000251 ORTHO05D007889 8.9e-34 147.1 90 81.1
MD06G1209200 Malus domestica HOM05D000251 ORTHO05D007889 8.9e-34 147.1 91 80.2
Rhsim08G0149100 Rhododendron simsii HOM05D000251 ORTHO05D007889 8.9e-34 147.1 91 79.1
Actinidia31039 Actinidia chinensis HOM05D000251 ORTHO05D007889 1.2e-33 146.7 92 78.3
Thecc.03G114900 Theobroma cacao HOM05D000251 ORTHO05D007889 1.2e-33 146.7 91 78.0
GSVIVG01008206001 Vitis vinifera HOM05D000251 ORTHO05D007889 1.2e-33 146.7 107 72.9
CsaV3_1G003490 Cucumis sativus L. HOM05D000251 ORTHO05D007889 2.6e-33 145.6 90 78.9
Eucgr.K02644 Eucalyptus grandis HOM05D000251 ORTHO05D007889 4.4e-33 144.8 90 81.1
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 4.4e-33 144.8 93 78.5
Gorai.003G106300 Gossypium raimondii HOM05D000251 ORTHO05D007889 5.8e-33 144.4 89 79.8
Sed0011411 Sechium edule HOM05D000251 ORTHO05D007889 7.6e-33 144.1 90 77.8
COL.COLO4_32187 Corchorus olitorius HOM05D000251 ORTHO05D007889 9.9e-33 143.7 91 76.9
Gohir.D03G100900 Gossypium hirsutum HOM05D000251 ORTHO05D007889 1.3e-32 143.3 89 79.8
Gohir.A03G074400 Gossypium hirsutum HOM05D000251 ORTHO05D007889 3.7e-32 141.7 89 77.5
TWI81G0067 Tripterygium wilfordii HOM05D000251 ORTHO05D007889 4.9e-32 141.4 89 79.8
Ciclev10018692m.g Citrus clementina HOM05D000251 ORTHO05D007889 6.4e-32 141.0 89 78.7
Duzib205G0552 Durio zibethinus HOM05D000251 ORTHO05D007889 8.4e-32 140.6 91 76.9
SGA_v2.0_scaffold283G46981 Striga asiatica HOM05D000251 ORTHO05D007889 8.4e-32 140.6 89 79.8
arahy.Tifrunner.gnm1.ann1.MAJ7P0 Arachis hypogaea HOM05D000251 ORTHO05D007889 1.1e-31 140.2 90 76.7
Glyma.05G015200 Glycine max HOM05D000251 ORTHO05D007889 1.1e-31 140.2 90 74.4
arahy.Tifrunner.gnm1.ann1.ESZ5GR Arachis hypogaea HOM05D000251 ORTHO05D007889 1.4e-31 139.8 88 78.4
Aqoxy3G00409 Aquilegia oxysepala HOM05D000251 ORTHO05D007889 1.9e-31 139.4 87 79.3
Peaxi162Scf00017g03036 Petunia axillaris HOM05D000251 ORTHO05D007889 1.9e-31 139.4 93 76.3
PGR044G2008 Punica granatum HOM05D000251 ORTHO05D007889 2.4e-31 139.0 105 69.5
Migut.G01282 Erythranthe guttata HOM05D000251 ORTHO05D007889 5.4e-31 137.9 92 77.2
Lj4g0022759 Lotus japonicus HOM05D000251 ORTHO05D007889 7.1e-31 137.5 90 73.3
Ca_02522_v3 Cicer arietinum L. HOM05D000251 ORTHO05D007889 9.2e-31 137.1 90 73.3
vmacro17646 Vaccinium macrocarpon HOM05D000251 ORTHO05D007889 9.2e-31 137.1 120 61.7
FAN18G2230 Fragaria x ananassa HOM05D000251 ORTHO05D007889 1.6e-30 136.3 90 74.4
RcHm_v2.0_Chr7g0184311 Rosa chinensis HOM05D000251 ORTHO05D007889 1.6e-30 136.3 90 74.4
Glyma.17G123700 Glycine max HOM05D000251 ORTHO05D007889 2.1e-30 136.0 88 73.9
Nitab4.5_0004342g0020 Nicotiana tabacum HOM05D000251 ORTHO05D007889 2.7e-30 135.6 93 74.2
Medtr4g112420 Medicago truncatula HOM05D000251 ORTHO05D007889 3.5e-30 135.2 90 71.1
Phvul.003G179400 Phaseolus vulgaris HOM05D000251 ORTHO05D007889 4.6e-30 134.8 90 71.1
Psat4g045640 Pisum sativum HOM05D000251 ORTHO05D007889 4.6e-30 134.8 90 72.2
Nitab4.5_0000646g0050 Nicotiana tabacum HOM05D000251 ORTHO05D007889 7.8e-30 134.0 93 73.1
SalBow2G1753 Salvia bowleyana HOM05D000251 ORTHO05D007889 7.8e-30 134.0 86 77.9
PSO017G5760 Papaver somniferum HOM05D000251 ORTHO05D007889 1.0e-29 133.7 91 75.8
PSO478G4362 Papaver somniferum HOM05D000251 ORTHO05D007889 1.0e-29 133.7 91 75.8
ClCG06G015150 Citrullus lanatus HOM05D000251 ORTHO05D007889 1.3e-29 133.3 110 64.5
Cc04_g07720 Coffea canephora HOM05D000251 ORTHO05D007889 1.7e-29 132.9 94 70.2
DCAR_015126 Daucus carota HOM05D000251 ORTHO05D007889 1.7e-29 132.9 89 75.3
Lalb_Chr12g0197521 Lupinus albus HOM05D000251 ORTHO05D007889 1.7e-29 132.9 90 72.2
VMungo1215G2774 Vigna mungo HOM05D000251 ORTHO05D007889 1.7e-29 132.9 90 71.1
TPR.G2793 Trifolium pratense HOM05D000251 ORTHO05D007889 2.3e-29 132.5 104 63.5
EL10Ac5g11229 Beta vulgaris HOM05D000251 ORTHO05D007889 3.0e-29 132.1 89 75.3
ECA246G2449 Erigeron canadensis HOM05D000251 ORTHO05D007889 3.0e-29 132.1 86 73.3
BraA09t36355Z Brassica rapa HOM05D000251 ORTHO05D007889 3.9e-29 131.7 91 74.7
Carub.0006s2087 Capsella rubella HOM05D000251 ORTHO05D007889 3.9e-29 131.7 87 78.2
CAN.G781.3 Capsicum annuum HOM05D000251 ORTHO05D007889 3.9e-29 131.7 93 72.0
AL6G34270 Arabidopsis lyrata HOM05D000251 ORTHO05D007889 5.1e-29 131.3 87 77.0
Lsat_1_v5_gn_5_24161 Lactuca sativa HOM05D000251 ORTHO05D007889 5.1e-29 131.3 86 73.3
Hund02531 Selenicereus undatus HOM05D000251 ORTHO05D007889 5.1e-29 131.3 96 70.8
BraA03t13769Z Brassica rapa HOM05D000251 ORTHO05D007889 6.6e-29 131.0 91 74.7
BcaC04g23479 Brassica carinata HOM05D000251 ORTHO05D007889 8.6e-29 130.6 87 77.0
BolC9t53705H Brassica oleracea HOM05D000251 ORTHO05D007889 8.6e-29 130.6 87 77.0
Sopen03g033510 Solanum pennellii HOM05D000251 ORTHO05D007889 8.6e-29 130.6 93 71.0
Aa31LG11G2570 Aethionema arabicum HOM05D000251 ORTHO05D007889 1.1e-28 130.2 86 75.6
BcaB04g19889 Brassica carinata HOM05D000251 ORTHO05D007889 1.1e-28 130.2 87 77.0
C07p44450 Brassica napus HOM05D000251 ORTHO05D007889 1.1e-28 130.2 91 73.6
BolC7t44966H Brassica oleracea HOM05D000251 ORTHO05D007889 1.1e-28 130.2 91 73.6
Sp2g24040 Schrenkiella parvula HOM05D000251 ORTHO05D007889 1.1e-28 130.2 87 75.9
A03p46430 Brassica napus HOM05D000251 ORTHO05D007889 1.5e-28 129.8 91 73.6
A09p07070 Brassica napus HOM05D000251 ORTHO05D007889 1.5e-28 129.8 91 73.6
AUR62032169 Chenopodium quinoa HOM05D000251 ORTHO05D007889 1.9e-28 129.4 92 71.7
Thhalv10003608m.g Eutrema salsugineum HOM05D000251 ORTHO05D007889 1.9e-28 129.4 91 72.5
Solyc03g114410.3 Solanum lycopersicum HOM05D000251 ORTHO05D007889 1.9e-28 129.4 93 69.9
C09p07920 Brassica napus HOM05D000251 ORTHO05D007889 5.6e-28 127.9 87 75.9
THA.LOC104819385 Tarenaya hassleriana HOM05D000251 ORTHO05D007889 1.2e-27 126.7 86 74.4
AT5G23080 Arabidopsis thaliana HOM05D000251 ORTHO05D007889 2.8e-27 125.6 87 73.6
HanXRQChr05g0157761 Helianthus annuus HOM05D000251 ORTHO05D007889 2.8e-27 125.6 101 63.4
AUR62036928 Chenopodium quinoa HOM05D000251 ORTHO05D007889 8.1e-27 124.0 95 68.4
FvH4_5g12911 Fragaria vesca HOM05D000251 ORTHO05D007889 2.4e-26 122.5 90 67.8
Os06g0489200 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D007889 2.4e-26 122.5 94 61.7
ATR0723G093 Amborella trichopoda HOM05D000251 ORTHO05D007889 6.8e-26 120.9 92 64.1
FAN13G2548 Fragaria x ananassa HOM05D000251 ORTHO05D000414 2.0e-25 119.4 90 65.6
CDE08G0099 Ceratophyllum demersum HOM05D000251 ORTHO05D007889 7.6e-25 117.5 86 64.0
SEGI_18733 Sequoiadendron giganteum HOM05D000251 ORTHO05D007889 2.9e-24 115.5 86 66.3
Ah.02g114420 Amaranthus hybridus HOM05D000251 ORTHO05D007889 1.1e-23 113.6 124 52.4
Cpa.g.sc13.78 Carica papaya HOM05D000251 ORTHO05D007889 2.3e-21 105.9 73 69.9
FAN18G3790 Fragaria x ananassa HOM05D000251 ORTHO05D007889 7.3e-20 100.9 135 45.2
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 7.3e-20 100.9 90 55.6
AagrBONN_evm.TU.Sc2ySwM_344.5190 Anthoceros agrestis HOM05D000251 ORTHO05D007889 4.8e-19 98.2 101 50.5
unitig_736.g22471 Utricularia gibba HOM05D000251 ORTHO05D007889 5.3e-18 94.7 83 59.0
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 6.9e-18 94.4 106 50.0
SMO358G0348 Selaginella moellendorffii HOM05D000251 ORTHO05D007889 6.4e-16 87.8 105 46.7
MELO3C017274.2 Cucumis melo HOM05D000251 ORTHO05D007889 5.4e-15 84.7 90 54.4
CBR_g57132 Chara braunii HOM05D000251 ORTHO05D007889 7.9e-14 80.9 60 58.3


User provided reference genes

Program Settings