Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 7.6e-214 746.9 377 100.0
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.9e-196 689.1 378 94.4
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 2.1e-187 659.1 376 85.1
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 2.8e-184 648.7 378 84.9
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 1.5e-182 642.9 383 83.6
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 9.4e-180 633.6 352 85.5
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 1.2e-179 633.3 377 82.8
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 8.0e-179 630.6 374 80.7
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 1.0e-178 630.2 352 84.9
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 3.0e-178 628.6 380 81.3
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 4.0e-178 628.2 376 83.2
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 2.6e-177 625.5 376 82.2
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 7.5e-177 624.0 378 82.3
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 9.7e-177 623.6 376 81.4
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 1.3e-176 623.2 376 80.1
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 1.3e-176 623.2 376 82.4
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 1.3e-176 623.2 377 81.4
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 3.7e-176 621.7 376 81.6
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 1.1e-175 620.2 376 80.3
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 7.0e-175 617.5 376 79.8
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 1.6e-174 616.3 374 81.3
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 4.5e-174 614.8 377 80.1
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 7.7e-174 614.0 378 78.8
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.3e-173 613.2 376 80.3
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 1.3e-173 613.2 376 80.3
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 2.9e-173 612.1 376 79.8
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 3.8e-173 611.7 376 78.2
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 3.8e-173 611.7 376 79.8
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 5.0e-173 611.3 376 78.7
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 6.5e-173 610.9 376 79.8
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 1.9e-172 609.4 375 77.9
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 2.5e-172 609.0 348 82.2
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 2.5e-172 609.0 352 81.5
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 4.2e-172 608.2 351 80.9
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 5.5e-172 607.8 351 80.6
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 5.5e-172 607.8 376 79.3
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.2e-171 606.7 376 79.0
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 1.2e-171 606.7 375 78.7
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 2.1e-171 605.9 379 78.4
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 2.1e-171 605.9 374 79.7
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 1.8e-170 602.8 374 79.1
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 1.8e-170 602.8 373 77.7
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 3.0e-170 602.1 376 76.9
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 8.8e-170 600.5 373 77.5
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 8.8e-170 600.5 378 78.8
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 5.7e-169 597.8 376 75.0
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 9.8e-169 597.0 351 80.3
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 1.3e-168 596.7 350 80.6
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 1.7e-168 596.3 351 78.9
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 3.7e-168 595.1 376 75.3
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 6.3e-168 594.3 351 77.8
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 8.3e-168 594.0 352 78.7
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 1.1e-167 593.6 351 79.8
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 1.4e-167 593.2 379 78.1
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 3.1e-167 592.0 377 77.5
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 4.1e-167 591.7 353 80.2
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 5.4e-167 591.3 353 79.9
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 9.1e-167 590.5 376 75.3
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 1.6e-166 589.7 373 78.3
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 2.0e-166 589.3 350 79.7
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 2.0e-166 589.3 376 78.2
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 2.7e-166 589.0 348 78.4
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 2.7e-166 589.0 371 76.0
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 7.7e-166 587.4 350 77.4
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 1.0e-165 587.0 376 74.5
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.0e-165 587.0 373 76.1
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 1.7e-165 586.3 376 74.5
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 2.9e-165 585.5 374 74.1
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 2.9e-165 585.5 348 79.0
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 3.8e-165 585.1 348 78.7
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 3.8e-165 585.1 348 78.7
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 3.8e-165 585.1 373 76.1
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 5.0e-165 584.7 346 78.6
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 8.5e-165 583.9 374 74.1
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 8.5e-165 583.9 371 76.0
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 8.5e-165 583.9 371 76.0
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.5e-164 583.2 373 76.1
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 2.5e-164 582.4 371 75.7
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 2.5e-164 582.4 371 75.7
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 2.5e-164 582.4 346 77.5
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 3.2e-164 582.0 347 78.1
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 3.2e-164 582.0 349 76.8
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 9.4e-164 580.5 349 76.8
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 1.6e-163 579.7 346 78.3
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 1.6e-163 579.7 371 75.2
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 2.1e-163 579.3 348 78.2
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 2.1e-163 579.3 374 73.3
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 2.1e-163 579.3 375 72.5
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 3.5e-158 562.0 370 72.7
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 3.8e-157 558.5 337 78.6
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 1.0e-154 550.4 348 75.9
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 1.3e-152 543.5 349 73.6
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 2.2e-152 542.7 384 68.8
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 6.2e-147 524.6 350 70.0
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 1.4e-146 523.5 411 66.9
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 4.9e-144 515.0 276 87.0
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 1.1e-135 487.3 275 80.4
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 7.1e-135 484.6 274 81.4
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 8.6e-133 477.6 275 78.9
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 8.6e-133 477.6 297 77.8
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 1.1e-132 477.2 349 62.5
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 1.1e-132 477.2 291 77.3
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 1.1e-132 477.2 343 64.4
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 1.9e-132 476.5 259 84.9
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 1.9e-127 459.9 269 78.4
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 3.2e-127 459.1 267 79.0
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 1.3e-125 453.8 349 60.5
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 1.1e-124 450.7 349 59.0
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 5.8e-121 438.3 276 74.3
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 1.6e-107 393.7 275 64.0
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 4.2e-103 379.0 247 70.0
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 1.2e-94 350.9 248 73.0
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 1.1e-92 344.4 366 47.3
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 8.7e-85 318.2 199 76.4
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 1.5e-84 317.4 357 45.9
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 1.1e-79 301.2 234 65.8
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 5.2e-69 265.8 351 39.6
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 9.4e-63 245.0 345 38.6
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 1.6e-62 244.2 309 41.1
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 2.7e-54 216.9 122 82.8
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 4.3e-31 139.8 81 74.1
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 2.3e-24 117.5 74 73.0
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 6.2e-22 109.4 71 77.5
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 3.4e-20 103.6 67 68.7
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 1.0e-16 92.0 134 38.8
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 3.1e-13 80.5 88 50.0
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 9.2e-10 68.9 56 60.7
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 1.6e-09 68.2 49 67.3
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.6e-06 58.2 88 40.9


User provided reference genes

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