Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G080400 Carya illinoinensis HOM05D000964 ORTHO05D004047 3.9e-105 384.8 195 100.0
Gohir.D01G102099 Gossypium hirsutum HOM05D000964 ORTHO05D004047 1.8e-41 173.3 98 84.7
Medtr4g051380 Medicago truncatula HOM05D000964 ORTHO05D004047 5.2e-41 171.8 100 85.0
Gohir.1Z050334 Gossypium hirsutum HOM05D000964 ORTHO05D004047 8.9e-41 171.0 98 83.7
Gohir.A12G025100 Gossypium hirsutum HOM05D000964 ORTHO05D004047 8.9e-41 171.0 98 83.7
PGR111G0002 Punica granatum HOM05D000964 ORTHO05D004047 4.4e-40 168.7 98 83.7
LjContig00318g0022290 Lotus japonicus HOM05D000964 ORTHO05D004047 7.6e-40 167.9 100 83.0
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 7.6e-40 167.9 100 83.0
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 7.6e-40 167.9 100 83.0
RcHm_v2.0_CPg0501901 Rosa chinensis HOM05D000964 ORTHO05D004047 9.9e-40 167.5 98 79.6
TWI75G0222 Tripterygium wilfordii HOM05D000964 ORTHO05D004047 9.9e-40 167.5 146 63.7
arahy.Tifrunner.gnm1.ann1.918II3 Arachis hypogaea HOM05D000964 ORTHO05D004047 1.7e-39 166.8 98 82.7
arahy.Tifrunner.gnm1.ann1.93R6SD Arachis hypogaea HOM05D000964 ORTHO05D004047 1.7e-39 166.8 98 82.7
DCAR_032517 Daucus carota HOM05D000964 ORTHO05D004047 3.8e-39 165.6 135 63.7
HanXRQChr00c0394g0574561 Helianthus annuus HOM05D000964 ORTHO05D004047 4.9e-39 165.2 98 81.6
HanXRQChr00c0593g0576341 Helianthus annuus HOM05D000964 ORTHO05D004047 4.9e-39 165.2 98 81.6
HanXRQChr01g0020241 Helianthus annuus HOM05D000964 ORTHO05D004047 4.9e-39 165.2 98 81.6
HanXRQChr04g0127511 Helianthus annuus HOM05D000964 ORTHO05D004047 4.9e-39 165.2 98 81.6
HanXRQChr10g0284361 Helianthus annuus HOM05D000964 ORTHO05D004047 4.9e-39 165.2 98 81.6
HanXRQChr10g0318081 Helianthus annuus HOM05D000964 ORTHO05D004047 4.9e-39 165.2 98 81.6
HanXRQChr11g0326941 Helianthus annuus HOM05D000964 ORTHO05D004047 4.9e-39 165.2 98 81.6
HanXRQCPg0580161 Helianthus annuus HOM05D000964 ORTHO05D004047 4.9e-39 165.2 98 81.6
Lsat_1_v5_gn_0_41600 Lactuca sativa HOM05D000964 ORTHO05D004047 4.9e-39 165.2 98 81.6
Lsat_1_v5_gn_7_96560 Lactuca sativa HOM05D000964 ORTHO05D004047 4.9e-39 165.2 98 81.6
Migut.D01434 Erythranthe guttata HOM05D000964 ORTHO05D004047 4.1e-38 162.2 98 80.6
Lalb_Chr25g0283351 Lupinus albus HOM05D000964 ORTHO05D004047 4.1e-38 162.2 98 81.6
C02p60150 Brassica napus HOM05D000964 ORTHO05D004047 5.4e-38 161.8 98 78.6
Lsat_1_v5_gn_5_50401 Lactuca sativa HOM05D000964 ORTHO05D004047 7.1e-38 161.4 98 79.6
BolSC46t61018H Brassica oleracea HOM05D000964 ORTHO05D004047 1.2e-37 160.6 98 77.6
BraA06t25382Z Brassica rapa HOM05D000964 ORTHO05D004047 1.2e-37 160.6 98 77.6
BraSC143t45635Z Brassica rapa HOM05D000964 ORTHO05D004047 1.2e-37 160.6 98 77.6
AL2G20580 Arabidopsis lyrata HOM05D000964 ORTHO05D004047 6.0e-37 158.3 98 76.5
AL2G21700 Arabidopsis lyrata HOM05D000964 ORTHO05D004047 6.0e-37 158.3 98 76.5
CARHR282230 Cardamine hirsuta HOM05D000964 ORTHO05D004047 7.8e-37 157.9 98 76.5
CAN.G1595.4 Capsicum annuum HOM05D000964 ORTHO05D004047 2.3e-36 156.4 98 77.6
CAN.G1478.7 Capsicum annuum HOM05D000964 ORTHO05D004047 5.1e-36 155.2 98 76.5
PSO548G0113 Papaver somniferum HOM05D000964 ORTHO05D004047 5.1e-36 155.2 98 76.5
ATCG00740 Arabidopsis thaliana HOM05D000964 ORTHO05D004047 1.9e-35 153.3 100 75.0
MSTRG.11748 Avicennia marina HOM05D000964 ORTHO05D004047 1.9e-35 153.3 113 67.3
PGSC0003DMG400002472 Solanum tuberosum HOM05D000964 ORTHO05D004047 4.3e-35 152.1 98 75.5
PGSC0003DMG400014075 Solanum tuberosum HOM05D000964 ORTHO05D004047 4.3e-35 152.1 98 75.5
Hund08596 Selenicereus undatus HOM05D000964 ORTHO05D004047 7.3e-35 151.4 135 57.8
Oeu058362.1 Olea europaea HOM05D000964 ORTHO05D004047 1.6e-34 150.2 98 74.5
PGSC0003DMG400003335 Solanum tuberosum HOM05D000964 ORTHO05D004047 2.1e-34 149.8 98 74.5
CAN.G327.18 Capsicum annuum HOM05D000964 ORTHO05D004047 4.7e-34 148.7 98 75.5
ClCG11G017180 Citrullus lanatus HOM05D000964 ORTHO05D004047 4.7e-34 148.7 93 78.5
Medtr0002s0760 Medicago truncatula HOM05D000964 ORTHO05D004047 9.9e-32 141.0 162 50.0
Oeu012810.1 Olea europaea HOM05D000964 ORTHO05D004047 1.4e-30 137.1 96 71.9
Lsat_1_v5_gn_6_69061 Lactuca sativa HOM05D000964 ORTHO05D004047 3.0e-28 129.4 95 69.5
Gohir.A01G137773 Gossypium hirsutum HOM05D000964 ORTHO05D004047 1.5e-27 127.1 103 63.1
Solyc01g017440.1 Solanum lycopersicum HOM05D000964 ORTHO05D004047 1.1e-25 120.9 96 63.5
HPP92_028402 Vanilla planifolia HOM05D000964 ORTHO05D004047 9.0e-25 117.9 98 61.2
HPP92_028410 Vanilla planifolia HOM05D000964 ORTHO05D004047 9.0e-25 117.9 98 61.2
Nn5g30296 Nelumbo nucifera HOM05D000964 ORTHO05D004047 2.0e-24 116.7 69 79.7
HPP92_028393 Vanilla planifolia HOM05D000964 ORTHO05D004047 2.0e-24 116.7 98 60.2
MD01G1006600 Malus domestica HOM05D000964 ORTHO05D004047 4.5e-24 115.5 76 76.3
Hma1.2p1_0818F.1_g223330 Hydrangea macrophylla HOM05D000964 ORTHO05D004047 2.9e-23 112.8 63 84.1
Nn002s41359 Nelumbo nucifera HOM05D000964 ORTHO05D004047 2.9e-23 112.8 69 76.8
BolSC29t60485H Brassica oleracea HOM05D000964 ORTHO05D004047 3.8e-23 112.5 69 76.8
BolSC29t60607H Brassica oleracea HOM05D000964 ORTHO05D004047 3.8e-23 112.5 69 76.8
HanXRQChr15g0486541 Helianthus annuus HOM05D000964 ORTHO05D004047 1.1e-22 110.9 69 76.8
Lj2P1237T122 Lonicera japonica HOM05D000964 ORTHO05D004047 1.6e-21 107.1 67 74.6
Lju5009P0T55 Lonicera japonica HOM05D000964 ORTHO05D004047 1.6e-21 107.1 67 74.6
HanXRQChr11g0345261 Helianthus annuus HOM05D000964 ORTHO05D004047 2.1e-21 106.7 66 78.8
Nitab4.5_0004376g0120 Nicotiana tabacum HOM05D000964 ORTHO05D004047 2.1e-21 106.7 87 64.4
Solyc00g500157.1 Solanum lycopersicum HOM05D000964 ORTHO05D004047 5.1e-20 102.1 69 68.1
Solyc09g050062.1 Solanum lycopersicum HOM05D000964 ORTHO05D004047 5.1e-20 102.1 69 68.1
Lalb_Chr03g0039311 Lupinus albus HOM05D000964 ORTHO05D004047 1.1e-19 100.9 98 57.1
Sed0000903 Sechium edule HOM05D000964 ORTHO05D004047 2.5e-19 99.8 98 54.1
Gohir.A05G326924 Gossypium hirsutum HOM05D000964 ORTHO05D004047 3.3e-19 99.4 56 82.1
Pp3c5_15590 Physcomitrium patens HOM05D000964 ORTHO05D004047 3.3e-19 99.4 99 49.5
EL10Ac4g08559 Beta vulgaris HOM05D000964 ORTHO05D004047 2.1e-18 96.7 65 72.3
Gohir.A09G245632 Gossypium hirsutum HOM05D000964 ORTHO05D004047 2.8e-18 96.3 55 81.8
SEGI_04931 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 3.1e-17 92.8 98 46.9
SEGI_17120 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 3.1e-17 92.8 98 46.9
SEGI_21589 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 3.1e-17 92.8 98 46.9
SEGI_22757 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 3.1e-17 92.8 98 46.9
SEGI_27150 Sequoiadendron giganteum HOM05D001133 ORTHO05D000941 3.1e-17 92.8 98 46.9
SEGI_32358 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 3.1e-17 92.8 98 46.9
SEGI_36889 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 3.1e-17 92.8 98 46.9
Gorai.007G252200 Gossypium raimondii HOM05D000964 ORTHO05D004047 4.0e-17 92.4 64 68.8
HanXRQChr12g0369841 Helianthus annuus HOM05D000964 ORTHO05D004047 2.0e-16 90.1 56 76.8
SEGI_33647 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 3.4e-16 89.4 97 46.4
Cpa.g.c42072 Carica papaya HOM05D000964 ORTHO05D004047 4.5e-16 89.0 48 87.5
Lj2C1239T2 Lonicera japonica HOM05D000964 ORTHO05D004047 5.8e-16 88.6 56 75.0
Gohir.D08G194628 Gossypium hirsutum HOM05D000964 ORTHO05D004047 1.3e-15 87.4 98 52.0
SEGI_02369 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 1.3e-15 87.4 98 44.9
Pp3c11_16940 Physcomitrium patens HOM05D000964 ORTHO05D004047 2.2e-15 86.7 98 43.9
EL10As15g24109 Beta vulgaris HOM05D000964 ORTHO05D004047 4.9e-15 85.5 64 64.1
Nn049s41916 Nelumbo nucifera HOM05D000964 ORTHO05D004047 3.5e-13 79.3 48 77.1
MELO3C000951.2 Cucumis melo HOM05D000964 ORTHO05D004047 6.0e-13 78.6 39 92.3
MELO3C027953.2 Cucumis melo HOM05D000964 ORTHO05D004047 6.0e-13 78.6 39 92.3
Duzib165G0005 Durio zibethinus HOM05D000964 ORTHO05D004047 7.9e-13 78.2 66 59.1
Gorai.010G120000 Gossypium raimondii HOM05D000964 ORTHO05D004047 1.9e-11 73.6 38 86.8
Gohir.A12G228525 Gossypium hirsutum HOM05D000964 ORTHO05D004047 4.3e-11 72.4 59 66.1
BolSC49t61165H Brassica oleracea HOM05D000964 ORTHO05D004047 5.6e-11 72.0 39 82.1
Nitab4.5_0001564g0040 Nicotiana tabacum HOM05D000964 ORTHO05D004047 1.6e-10 70.5 55 58.2
Gorai.004G150700 Gossypium raimondii HOM05D000964 ORTHO05D003870 2.1e-10 70.1 59 64.4
Gohir.D08G145550 Gossypium hirsutum HOM05D000964 ORTHO05D003870 6.2e-10 68.6 59 62.7
SEGI_31867 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 1.1e-09 67.8 78 44.9
SGA_v2.0_scaffold95G28822 Striga asiatica HOM05D000964 ORTHO05D004047 1.4e-09 67.4 66 53.0
Lalb_Chr20g0115421 Lupinus albus HOM05D000964 ORTHO05D004047 1.0e-07 61.2 34 88.2
Mapoly0026s0099 Marchantia polymorpha HOM05D000964 ORTHO05D004047 1.3e-07 60.8 86 37.2
HanXRQChr10g0303881 Helianthus annuus HOM05D000964 ORTHO05D004047 6.5e-07 58.5 29 93.1
HanXRQChr11g0321071 Helianthus annuus HOM05D000964 ORTHO05D004047 6.5e-07 58.5 29 93.1
PSO478G2461 Papaver somniferum HOM05D000964 ORTHO05D004047 6.5e-07 58.5 29 89.7
CARHR287430 Cardamine hirsuta HOM05D000964 ORTHO05D004047 2.5e-06 56.6 34 73.5


User provided reference genes

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