Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 4.3e-292 1007.3 514 100.0
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 2.0e-209 732.6 532 73.7
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 1.9e-207 726.1 574 69.9
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 1.2e-198 696.8 530 69.6
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 1.8e-197 693.0 703 56.5
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 3.2e-178 629.0 522 62.5
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 5.6e-175 618.2 526 61.2
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 7.3e-175 617.8 522 62.3
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 3.6e-174 615.5 521 64.9
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 1.4e-173 613.6 522 61.7
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 5.2e-173 611.7 520 62.9
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 2.3e-168 596.3 594 55.1
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 3.9e-168 595.5 521 60.7
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 8.6e-168 594.3 554 57.0
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 8.6e-168 594.3 555 56.9
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 5.8e-164 581.6 521 60.1
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 7.6e-164 581.3 551 55.7
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 1.1e-162 577.4 549 57.0
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 7.1e-162 574.7 520 59.0
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 1.5e-159 567.0 553 54.1
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 5.6e-159 565.1 552 54.2
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 7.3e-159 564.7 558 53.2
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 1.4e-157 560.5 572 52.1
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 3.1e-157 559.3 523 55.8
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 4.0e-157 558.9 550 52.9
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 8.9e-157 557.8 550 52.9
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 3.4e-156 555.8 577 51.5
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 4.4e-156 555.4 548 52.7
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 3.5e-153 545.8 540 54.1
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 3.9e-152 542.3 567 52.7
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 8.7e-152 541.2 560 52.7
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 4.3e-151 538.9 537 57.0
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 6.2e-150 535.0 528 54.4
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 1.1e-149 534.3 528 53.0
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.4e-149 533.9 506 57.3
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 4.0e-149 532.3 549 53.7
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 1.2e-148 530.8 523 54.7
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 2.6e-148 529.6 568 50.5
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 3.8e-147 525.8 526 52.9
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 5.4e-146 521.9 535 52.5
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 1.6e-145 520.4 575 50.8
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 3.5e-145 519.2 526 52.9
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 1.3e-144 517.3 535 53.5
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 2.3e-144 516.5 568 50.9
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.1e-143 514.2 574 51.0
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 2.1e-142 510.0 553 50.1
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 4.8e-142 508.8 527 51.8
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 1.5e-140 503.8 460 59.8
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 4.9e-139 498.8 572 50.3
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 1.1e-138 497.7 551 49.9
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 2.7e-137 493.0 578 48.4
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 3.5e-137 492.7 543 50.1
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 1.3e-136 490.7 552 49.3
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 2.3e-136 490.0 540 48.9
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 1.1e-135 487.6 553 50.5
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 7.4e-135 485.0 548 49.1
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 6.9e-133 478.4 444 57.2
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 2.0e-132 476.9 588 45.7
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 2.2e-131 473.4 597 44.9
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 8.4e-131 471.5 537 48.6
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 4.2e-130 469.2 546 49.1
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 1.6e-129 467.2 542 46.9
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 2.1e-129 466.8 530 50.2
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 2.1e-129 466.8 667 43.6
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 4.6e-129 465.7 577 46.4
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 9.6e-127 458.0 503 51.7
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 4.8e-126 455.7 536 49.4
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 8.2e-126 454.9 552 44.9
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 1.1e-125 454.5 535 47.1
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 1.8e-125 453.8 543 45.9
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 1.5e-124 450.7 542 45.9
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 1.5e-124 450.7 538 46.5
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 6.5e-123 445.3 517 48.5
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 8.4e-123 444.9 538 46.3
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 1.1e-122 444.5 531 46.7
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 1.6e-121 440.7 539 46.2
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 3.5e-121 439.5 511 49.1
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 5.3e-117 425.6 522 46.0
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 1.5e-116 424.1 560 45.2
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 4.5e-116 422.5 500 48.2
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 1.1e-114 417.9 534 46.8
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 7.9e-113 411.8 464 51.3
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 1.4e-112 411.0 453 49.0
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 8.8e-112 408.3 579 44.6
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 1.6e-105 387.5 493 46.5
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 2.8e-102 376.7 554 40.8
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 1.1e-98 364.8 417 51.1
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 3.2e-98 363.2 382 52.4
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 5.7e-95 352.4 469 43.5
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 2.0e-92 344.0 541 41.4
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 2.6e-92 343.6 330 51.8
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 1.2e-87 328.2 565 38.6
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.2e-86 323.9 439 44.4
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 2.9e-83 313.5 496 40.7
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 7.2e-82 308.9 446 43.7
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 4.9e-78 296.2 420 42.9
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 2.7e-76 290.4 374 45.7
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 8.3e-70 268.9 596 33.2
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 6.6e-67 259.2 204 61.8
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 3.6e-65 253.4 472 37.9
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 1.0e-64 251.9 539 33.8
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 1.3e-62 245.0 354 43.8
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 1.1e-56 225.3 192 59.4
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.8e-56 224.6 318 45.3
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 2.1e-49 201.1 211 53.6
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 6.2e-49 199.5 152 65.1
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 4.0e-48 196.8 152 64.5
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 5.4e-45 186.4 210 53.3
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.3e-43 181.8 138 65.2
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 2.2e-38 164.5 577 28.2
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.8e-38 163.7 119 67.2
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 5.8e-31 139.8 115 60.0
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 3.8e-30 137.1 372 30.4
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.4e-29 134.4 159 45.9
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 5.5e-21 106.7 81 72.8
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.8e-19 101.7 70 70.0
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 8.4e-14 82.8 214 31.8
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.2e-12 79.0 50 72.0
Cfa006566 Carpinus fangiana HOM05D003924 ORTHO05D043563 3.9e-11 73.9 60 66.7
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.5e-10 72.0 57 59.6
MCO11G052 Micromonas commoda HOM05D006560 ORTHO05D008164 2.9e-06 57.8 146 31.5


User provided reference genes

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