Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 1.1e-248 863.6 712 100.0
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 2.4e-112 410.6 642 77.9
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 5.1e-110 402.9 620 79.4
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 9.3e-104 382.1 649 75.0
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 1.1e-99 368.6 650 73.8
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 4.2e-96 356.7 618 76.9
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 5.5e-96 356.3 635 73.1
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 2.5e-93 347.4 621 74.6
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 7.4e-93 345.9 601 77.2
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 1.3e-92 345.1 605 75.2
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 2.2e-92 344.4 601 76.7
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 4.8e-92 343.2 599 76.1
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 4.8e-92 343.2 621 74.9
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 6.3e-92 342.8 603 76.6
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 1.1e-91 342.0 636 74.1
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 1.4e-91 341.7 607 75.0
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 1.8e-91 341.3 609 75.5
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 6.9e-91 339.3 594 76.8
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.2e-90 338.6 601 76.4
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 1.2e-90 338.6 602 76.2
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 1.5e-90 338.2 612 74.8
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 1.0e-89 335.5 607 74.3
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.0e-89 335.5 605 75.4
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 2.2e-89 334.3 592 75.7
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 1.1e-88 332.0 601 75.0
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 4.2e-88 330.1 622 73.5
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 1.6e-87 328.2 603 75.1
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 6.1e-87 326.2 610 75.1
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 3.9e-86 323.6 602 73.4
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 3.3e-85 320.5 620 73.9
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 9.7e-85 318.9 594 74.4
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 1.7e-84 318.2 607 74.1
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 4.8e-84 316.6 554 78.5
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 1.1e-83 315.5 612 73.2
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 3.1e-83 313.9 601 73.4
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 3.1e-83 313.9 651 68.0
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 9.1e-83 312.4 505 83.4
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 1.2e-82 312.0 614 72.3
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 3.4e-82 310.5 593 73.9
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 4.5e-82 310.1 627 71.5
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 1.0e-81 308.9 528 71.2
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 1.3e-81 308.5 617 73.3
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 1.3e-81 308.5 606 73.6
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 1.7e-81 308.1 609 72.2
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 2.2e-81 307.8 629 70.7
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 2.2e-81 307.8 616 57.8
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 2.9e-81 307.4 643 68.7
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 5.0e-81 306.6 628 71.2
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 1.4e-80 305.1 582 75.6
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 1.9e-80 304.7 557 77.0
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 7.2e-80 302.8 602 72.6
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 7.2e-80 302.8 603 72.5
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 9.4e-80 302.4 627 71.1
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.2e-79 302.0 627 71.6
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 2.1e-79 301.2 483 84.9
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 2.1e-79 301.2 589 72.7
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 4.7e-79 300.1 614 72.8
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 4.7e-79 300.1 617 71.8
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 4.7e-79 300.1 595 73.8
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 4.7e-79 300.1 613 71.9
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 3.0e-78 297.4 613 71.0
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 3.0e-78 297.4 605 72.9
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 6.7e-78 296.2 628 71.7
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 2.0e-77 294.7 606 70.6
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 2.0e-77 294.7 610 70.5
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 4.4e-77 293.5 612 70.8
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 9.7e-77 292.4 610 70.3
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 2.8e-76 290.8 618 70.1
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 3.7e-76 290.4 606 70.6
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 3.7e-76 290.4 606 70.6
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 4.8e-76 290.0 559 74.8
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 1.4e-75 288.5 613 70.8
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 1.8e-75 288.1 610 70.5
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 1.8e-75 288.1 619 71.4
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 3.1e-75 287.3 613 71.0
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 2.0e-74 284.6 567 75.3
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.0e-73 282.3 466 85.6
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.3e-73 282.0 466 85.6
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 5.0e-73 280.0 622 69.6
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 5.0e-73 280.0 620 69.8
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 2.5e-72 277.7 593 72.2
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 5.5e-72 276.6 609 68.6
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 1.6e-71 275.0 648 45.4
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 4.7e-71 273.5 649 66.6
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 6.1e-71 273.1 489 81.0
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 1.4e-70 271.9 587 71.6
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 2.6e-69 267.7 257 58.8
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 2.8e-68 264.2 610 70.2
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 2.0e-66 258.1 477 82.4
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 2.6e-66 257.7 501 74.7
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 6.5e-65 253.1 506 40.7
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 2.0e-61 241.5 515 75.7
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 7.5e-61 239.6 274 53.3
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 3.7e-60 237.3 256 53.9
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 1.8e-59 235.0 254 53.5
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 9.1e-59 232.6 648 58.5
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 4.2e-56 223.8 270 52.2
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 1.5e-48 198.7 160 60.0
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 2.3e-41 174.9 518 69.5
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 1.2e-39 169.1 261 46.0
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 1.5e-32 145.6 110 60.0
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 1.9e-32 145.2 179 53.1
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 2.5e-32 144.8 190 44.7
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 2.3e-30 138.3 102 71.6
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 2.0e-29 135.2 196 40.8
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 3.7e-28 131.0 110 60.0
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 6.4e-28 130.2 198 38.9
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 1.4e-27 129.0 162 66.0
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.7e-26 124.8 80 78.8
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 3.0e-25 121.3 80 76.2
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.1e-22 111.3 142 49.3
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 4.6e-18 97.4 145 38.6
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 1.5e-16 92.4 245 35.1
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 9.6e-16 89.7 117 40.2
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 1.8e-14 85.5 75 94.7
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 4.9e-12 77.4 157 32.5
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 7.8e-10 70.1 68 58.8


User provided reference genes

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