Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 0.0e+00 1101.3 532 100.0
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 5.2e-293 1010.4 535 91.2
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 1.7e-283 978.8 555 86.5
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 1.0e-272 943.0 541 85.2
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 3.0e-272 941.4 537 85.1
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 6.6e-272 940.3 532 85.5
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 7.3e-271 936.8 536 83.6
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 3.6e-270 934.5 535 83.2
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 6.9e-269 930.2 536 84.5
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 6.9e-269 930.2 540 83.3
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 1.2e-268 929.5 540 84.1
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 1.5e-268 929.1 540 84.6
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 3.4e-268 927.9 541 83.2
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 1.3e-267 926.0 533 83.3
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 2.2e-267 925.2 533 83.1
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 6.4e-267 923.7 536 83.0
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 8.4e-267 923.3 537 82.9
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 1.1e-266 922.9 543 84.2
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.1e-266 922.9 543 82.7
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 2.4e-266 921.8 536 82.1
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 4.2e-266 921.0 545 82.9
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 2.1e-265 918.7 542 82.1
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 2.1e-265 918.7 533 82.4
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 2.7e-265 918.3 562 79.7
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.7e-264 915.6 533 82.0
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 2.3e-264 915.2 542 81.7
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 6.6e-264 913.7 535 82.1
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.5e-263 912.5 558 80.8
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.5e-263 912.5 571 79.3
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 3.3e-263 911.4 529 83.7
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 5.6e-263 910.6 533 80.7
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 1.3e-262 909.4 533 82.2
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.3e-262 909.4 540 81.7
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 2.8e-262 908.3 533 81.6
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 4.8e-262 907.5 592 77.2
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 8.1e-262 906.7 542 81.2
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 4.0e-261 904.4 532 82.3
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 6.9e-261 903.7 535 82.4
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 1.5e-260 902.5 532 83.1
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 1.5e-260 902.5 534 82.0
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 1.5e-260 902.5 534 81.3
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 2.0e-260 902.1 532 82.7
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 2.6e-260 901.7 538 81.4
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 4.5e-260 901.0 532 81.6
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 5.8e-260 900.6 534 81.1
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 9.9e-260 899.8 532 82.0
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 8.4e-259 896.7 532 81.6
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 4.2e-258 894.4 534 81.1
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 2.7e-257 891.7 549 79.2
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 1.5e-255 885.9 532 80.3
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.6e-254 882.5 532 81.2
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 2.8e-254 881.7 539 79.2
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 4.8e-254 880.9 518 81.1
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 4.8e-254 880.9 532 81.0
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 6.2e-254 880.6 539 80.7
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 8.1e-254 880.2 518 81.5
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.8e-253 879.0 539 78.8
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 3.1e-253 878.2 542 78.4
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 1.2e-252 876.3 529 80.3
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 3.4e-252 874.8 591 74.1
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 9.9e-252 873.2 537 80.6
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 2.9e-251 871.7 517 80.5
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 6.4e-251 870.5 542 80.1
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 1.1e-250 869.8 535 78.3
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 1.1e-250 869.8 517 80.1
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 4.2e-250 867.8 532 79.3
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 5.5e-250 867.5 522 79.3
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 7.1e-250 867.1 537 77.5
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 1.6e-249 865.9 512 81.1
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 4.6e-249 864.4 535 77.4
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 6.0e-249 864.0 537 77.3
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 1.0e-248 863.2 541 77.4
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 1.0e-248 863.2 536 79.3
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 3.0e-248 861.7 531 78.9
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 3.3e-247 858.2 499 81.2
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 5.6e-247 857.4 540 76.9
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 1.3e-246 856.3 524 80.0
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 2.1e-246 855.5 531 78.5
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 3.7e-246 854.7 535 79.1
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 3.7e-246 854.7 533 77.7
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 1.8e-245 852.4 529 77.1
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 1.8e-245 852.4 529 77.1
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 1.8e-245 852.4 544 77.0
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 1.5e-244 849.4 518 78.6
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 3.4e-244 848.2 518 78.6
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 7.6e-244 847.0 536 76.3
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 1.0e-243 846.7 517 77.9
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 2.2e-243 845.5 534 78.3
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 6.5e-243 844.0 539 76.3
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 1.0e-240 836.6 483 82.4
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 1.3e-240 836.3 545 75.6
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 5.1e-240 834.3 470 84.5
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 1.1e-237 826.6 521 75.8
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 9.0e-237 823.5 560 73.8
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 2.0e-236 822.4 545 75.0
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 1.3e-235 819.7 545 75.0
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 1.7e-235 819.3 561 72.4
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 2.2e-235 818.9 560 73.4
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 2.2e-235 818.9 537 76.4
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 3.6e-233 811.6 534 73.8
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 8.8e-232 807.0 479 79.3
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 2.2e-230 802.4 535 73.5
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 8.2e-230 800.4 533 73.2
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 2.0e-220 769.2 478 77.2
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 3.9e-216 755.0 513 71.3
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 3.5e-212 741.9 535 67.3
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 1.0e-208 730.3 427 79.2
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 1.8e-208 729.6 460 76.3
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 3.0e-208 728.8 399 84.5
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.2e-201 706.8 429 79.0
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 3.2e-189 665.6 385 84.7
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 3.5e-188 662.1 401 76.6
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 3.9e-187 658.7 496 68.3
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 1.3e-179 633.6 331 86.7
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 2.9e-158 562.8 472 58.7
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 3.3e-154 549.3 283 89.0
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 7.3e-154 548.1 469 56.1
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 8.1e-153 544.7 344 76.7
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 6.4e-150 535.0 399 68.9
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 6.7e-139 498.4 346 69.7
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 1.8e-136 490.3 367 64.3
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 5.8e-135 485.3 451 53.7
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 8.2e-129 464.9 464 51.3
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 3.4e-127 459.5 332 70.5
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 6.5e-102 375.6 271 72.7
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 1.7e-94 350.9 181 89.5
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 6.8e-91 339.0 231 77.9
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 2.7e-87 327.0 182 83.5
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 5.6e-77 292.7 228 63.6
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 7.5e-58 229.2 135 77.8
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 3.0e-46 190.7 115 80.0
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 3.6e-44 183.7 102 80.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 9.9e-34 149.1 81 85.2
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 7.4e-29 132.9 67 91.0
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 1.8e-22 111.7 58 87.9
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 3.9e-22 110.5 67 77.6
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 3.9e-22 110.5 67 77.6
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 3.7e-20 104.0 53 86.8
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 1.0e-17 95.9 50 82.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 1.2e-15 89.0 108 48.1


User provided reference genes

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