Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 5.3e-193 677.6 353 100.0
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.1e-44 184.9 266 39.1
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.4e-44 184.5 266 39.1
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.1e-44 183.3 265 39.6
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.1e-44 183.3 265 39.6
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 4.1e-44 183.0 204 43.1
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 5.4e-44 182.6 249 40.2
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 7.0e-44 182.2 269 37.9
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.6e-43 181.0 265 38.1
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 1.6e-43 181.0 268 37.3
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 2.0e-43 180.6 298 35.6
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 2.7e-43 180.3 265 39.2
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 4.5e-43 179.5 215 40.9
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 4.5e-43 179.5 330 34.8
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 4.5e-43 179.5 277 37.5
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 5.9e-43 179.1 312 36.2
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 7.8e-43 178.7 229 39.3
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 7.8e-43 178.7 230 39.1
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 7.8e-43 178.7 304 34.2
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 1.3e-42 177.9 263 38.4
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 1.7e-42 177.6 262 37.8
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 1.7e-42 177.6 278 36.0
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 1.7e-42 177.6 227 41.4
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.3e-42 177.2 304 35.9
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 2.3e-42 177.2 304 33.6
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 2.9e-42 176.8 298 34.6
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 2.9e-42 176.8 290 36.9
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 2.9e-42 176.8 304 34.9
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 3.8e-42 176.4 265 39.6
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 3.8e-42 176.4 249 39.0
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 5.0e-42 176.0 295 35.6
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 6.6e-42 175.6 301 36.2
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 6.6e-42 175.6 324 34.6
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 8.6e-42 175.3 247 40.1
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 1.1e-41 174.9 311 34.4
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 1.5e-41 174.5 251 37.8
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 1.5e-41 174.5 316 35.1
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 1.9e-41 174.1 324 34.3
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 1.9e-41 174.1 309 34.3
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.5e-41 173.7 286 37.1
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 2.5e-41 173.7 344 32.8
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 2.5e-41 173.7 217 39.6
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 3.3e-41 173.3 290 36.6
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 3.3e-41 173.3 290 36.6
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 3.3e-41 173.3 290 36.6
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 3.3e-41 173.3 199 41.2
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 4.3e-41 172.9 327 33.6
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 4.3e-41 172.9 313 36.4
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 4.3e-41 172.9 199 41.7
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 4.3e-41 172.9 321 35.2
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 4.3e-41 172.9 308 36.7
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 5.6e-41 172.6 279 36.9
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 5.6e-41 172.6 201 41.3
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 5.6e-41 172.6 199 42.2
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 7.3e-41 172.2 291 36.4
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 7.3e-41 172.2 291 36.4
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 7.3e-41 172.2 343 32.9
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 7.3e-41 172.2 306 34.3
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 7.3e-41 172.2 313 34.2
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.2e-40 171.4 316 35.1
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 1.2e-40 171.4 252 39.7
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 1.2e-40 171.4 288 37.5
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 2.1e-40 170.6 307 34.9
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 2.8e-40 170.2 318 34.0
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 2.8e-40 170.2 305 33.1
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 2.8e-40 170.2 329 34.7
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 3.6e-40 169.9 307 34.9
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 4.7e-40 169.5 259 37.1
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 4.7e-40 169.5 272 34.9
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 4.7e-40 169.5 291 34.0
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 6.1e-40 169.1 308 33.8
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 8.0e-40 168.7 235 37.9
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 1.0e-39 168.3 214 40.2
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.0e-39 168.3 316 35.4
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 1.0e-39 168.3 247 37.2
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 1.4e-39 167.9 199 41.7
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 1.8e-39 167.5 321 33.6
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 3.0e-39 166.8 219 39.7
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 3.0e-39 166.8 294 34.0
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 3.0e-39 166.8 292 34.9
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 4.0e-39 166.4 315 33.0
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 5.2e-39 166.0 187 42.8
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 6.8e-39 165.6 238 37.4
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 6.8e-39 165.6 266 34.6
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 1.2e-38 164.9 319 32.3
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 1.2e-38 164.9 208 40.4
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 1.5e-38 164.5 227 38.3
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 2.6e-38 163.7 205 41.0
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 3.4e-38 163.3 185 42.7
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 7.5e-38 162.2 273 37.0
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 9.8e-38 161.8 293 34.1
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.3e-37 161.4 308 33.1
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 1.1e-36 158.3 344 31.7
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 3.2e-36 156.8 274 34.7
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 5.0e-34 149.4 246 36.6
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 1.1e-33 148.3 269 33.1
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 1.5e-33 147.9 165 42.4
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 3.3e-33 146.7 181 41.4
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 9.5e-33 145.2 290 33.4
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 1.2e-32 144.8 367 31.1
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 1.3e-29 134.8 312 30.4
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 1.1e-28 131.7 158 41.1
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 1.4e-28 131.3 158 39.9
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 1.4e-28 131.3 137 43.8
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.5e-25 120.6 206 33.0
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 2.1e-24 117.5 278 29.1
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 2.8e-24 117.1 239 32.6
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.6e-22 110.5 287 28.9
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 4.4e-22 109.8 195 29.2
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 5.8e-22 109.4 140 38.6
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.7e-18 97.8 207 29.5
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 1.2e-14 85.1 220 30.5
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 2.0e-14 84.3 307 26.7
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.7e-13 81.3 181 30.9
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 5.4e-12 76.3 204 27.5
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.3e-10 71.6 234 25.2
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 4.0e-07 60.1 66 42.4
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 9.0e-07 58.9 84 38.1
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 7.6e-06 55.8 83 34.9


User provided reference genes

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