Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa024562 Carpinus fangiana HOM05D000283 ORTHO05D004861 1.3e-219 766.1 393 100.0
Mapoly0093s0006 Marchantia polymorpha HOM05D000283 ORTHO05D004861 3.5e-52 209.9 406 33.5
Migut.F01536 Erythranthe guttata HOM05D000283 ORTHO05D004861 1.5e-50 204.5 400 34.5
Hma1.2p1_0207F.1_g087990 Hydrangea macrophylla HOM05D000283 ORTHO05D004861 1.9e-50 204.1 400 34.5
Lj8A93G63 Lonicera japonica HOM05D000283 ORTHO05D004861 5.6e-50 202.6 401 34.4
RcHm_v2.0_Chr1g0364711 Rosa chinensis HOM05D000283 ORTHO05D004861 5.6e-50 202.6 403 34.5
Medtr1g116055 Medicago truncatula HOM05D000283 ORTHO05D004861 7.3e-50 202.2 401 34.2
SalBow6G5798 Salvia bowleyana HOM05D000283 ORTHO05D004861 1.2e-49 201.4 403 34.5
SMO119G0426 Selaginella moellendorffii HOM05D000283 ORTHO05D004861 1.2e-49 201.4 401 32.9
Lj5g0010112 Lotus japonicus HOM05D004526 ORTHO05D004861 2.8e-49 200.3 401 34.9
Phvul.007G007400 Phaseolus vulgaris HOM05D000283 ORTHO05D004861 3.6e-49 199.9 400 34.5
Haze_27231 Corylus avellana HOM05D000283 ORTHO05D004861 4.7e-49 199.5 397 32.7
Glyma.20G242800 Glycine max HOM05D000283 ORTHO05D004861 6.2e-49 199.1 402 34.3
Prupe.2G222200 Prunus persica HOM05D000283 ORTHO05D004861 8.1e-49 198.7 402 33.1
MSTRG.8232 Avicennia marina HOM05D000283 ORTHO05D004861 1.1e-48 198.4 401 33.7
Cc02_g08700 Coffea canephora HOM05D000283 ORTHO05D004861 1.1e-48 198.4 402 33.6
VMungo0720G1844 Vigna mungo HOM05D000283 ORTHO05D004861 1.1e-48 198.4 401 35.4
MBI02_g23397_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D004861 1.4e-48 198.0 404 32.7
Sopen04g005260 Solanum pennellii HOM05D000283 ORTHO05D004861 1.8e-48 197.6 401 32.9
ECA232G1460 Erigeron canadensis HOM05D000283 ORTHO05D004861 3.1e-48 196.8 398 33.4
Glyma.10G292551 Glycine max HOM05D000283 ORTHO05D004861 3.1e-48 196.8 371 35.0
AUR62043801 Chenopodium quinoa HOM05D000283 ORTHO05D004861 4.0e-48 196.4 400 33.2
DCAR_019154 Daucus carota HOM05D000283 ORTHO05D004861 4.0e-48 196.4 401 33.9
DCAR_019151 Daucus carota HOM05D000283 ORTHO05D004861 5.2e-48 196.1 400 33.8
Oeu050636.1 Olea europaea HOM05D000283 ORTHO05D004861 6.8e-48 195.7 402 33.3
Pp3c8_20500 Physcomitrium patens HOM05D000283 ORTHO05D004861 6.8e-48 195.7 401 32.7
Dinv31387 Davidia involucrata HOM05D000283 ORTHO05D004861 8.9e-48 195.3 401 33.4
Hund22437 Selenicereus undatus HOM05D000283 ORTHO05D004861 8.9e-48 195.3 401 33.9
Solyc04g010120.3 Solanum lycopersicum HOM05D000283 ORTHO05D004861 8.9e-48 195.3 401 32.7
Lalb_Chr02g0143841 Lupinus albus HOM05D000283 ORTHO05D004861 1.2e-47 194.9 371 35.3
MD01G1115200 Malus domestica HOM05D000283 ORTHO05D004861 1.2e-47 194.9 403 33.3
AUR62043534 Chenopodium quinoa HOM05D000283 ORTHO05D004861 1.5e-47 194.5 400 33.0
FvH4_7g20680 Fragaria vesca HOM05D000283 ORTHO05D004861 1.5e-47 194.5 403 33.5
MD07G1183500 Malus domestica HOM05D000283 ORTHO05D004861 1.5e-47 194.5 403 33.5
Manes.10G039500 Manihot esculenta HOM05D000283 ORTHO05D004861 1.5e-47 194.5 401 33.4
CAN.G786.36 Capsicum annuum HOM05D000283 ORTHO05D004861 2.0e-47 194.1 402 32.6
FAN06G3181 Fragaria x ananassa HOM05D000283 ORTHO05D004861 2.0e-47 194.1 403 33.5
SEGI_26055 Sequoiadendron giganteum HOM05D000283 ORTHO05D004861 2.0e-47 194.1 401 32.9
CiPaw.01G279200 Carya illinoinensis HOM05D000283 ORTHO05D004861 2.6e-47 193.7 401 33.2
AUR62025543 Chenopodium quinoa HOM05D000283 ORTHO05D004861 2.6e-47 193.7 400 33.0
FAN06G3682 Fragaria x ananassa HOM05D000283 ORTHO05D004861 2.6e-47 193.7 403 33.5
Lalb_Chr21g0307121 Lupinus albus HOM05D000283 ORTHO05D004861 2.6e-47 193.7 411 33.1
CDE11G0382 Ceratophyllum demersum HOM05D000283 ORTHO05D004861 4.4e-47 193.0 371 34.2
Ca_11339_v3 Cicer arietinum L. HOM05D000283 ORTHO05D004861 4.4e-47 193.0 401 32.9
Peaxi162Scf00135g00213 Petunia axillaris HOM05D000283 ORTHO05D004861 4.4e-47 193.0 398 32.7
Pp3c24_18980 Physcomitrium patens HOM05D000283 ORTHO05D004861 4.4e-47 193.0 401 31.9
Hma1.2p1_0348F.1_g131730 Hydrangea macrophylla HOM05D000283 ORTHO05D004861 5.8e-47 192.6 396 32.3
Thecc.10G063500 Theobroma cacao HOM05D000283 ORTHO05D004861 5.8e-47 192.6 402 33.3
Cfa001563 Carpinus fangiana HOM05D000283 ORTHO05D004861 7.5e-47 192.2 399 33.1
COL.COLO4_05799 Corchorus olitorius HOM05D000283 ORTHO05D004861 7.5e-47 192.2 402 33.6
Duzib106G0238 Durio zibethinus HOM05D000283 ORTHO05D004861 7.5e-47 192.2 402 33.1
HanXRQChr09g0246601 Helianthus annuus HOM05D000283 ORTHO05D004861 7.5e-47 192.2 398 32.7
PSO384G1824 Papaver somniferum HOM05D000283 ORTHO05D004861 7.5e-47 192.2 399 33.1
Sed0024713 Sechium edule HOM05D000283 ORTHO05D004861 7.5e-47 192.2 402 33.3
Eucgr.J01144 Eucalyptus grandis HOM05D000283 ORTHO05D004861 9.9e-47 191.8 389 34.2
FAN10G1136 Fragaria x ananassa HOM05D000283 ORTHO05D004861 9.9e-47 191.8 401 33.4
PSO699G0010 Papaver somniferum HOM05D000283 ORTHO05D004861 9.9e-47 191.8 399 33.1
PGR044G2742 Punica granatum HOM05D000283 ORTHO05D004861 9.9e-47 191.8 402 32.6
TAR623G1321 Trochodendron aralioides HOM05D000283 ORTHO05D004861 9.9e-47 191.8 401 32.7
arahy.Tifrunner.gnm1.ann1.5B7TYX Arachis hypogaea HOM05D000283 ORTHO05D004861 1.3e-46 191.4 409 34.2
Ciclev10031660m.g Citrus clementina HOM05D000283 ORTHO05D004861 1.3e-46 191.4 402 32.6
arahy.Tifrunner.gnm1.ann1.M3B011 Arachis hypogaea HOM05D000283 ORTHO05D004861 2.2e-46 190.7 409 34.2
CSS0032920 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 2.2e-46 190.7 372 34.7
Nitab4.5_0006737g0080 Nicotiana tabacum HOM05D000283 ORTHO05D004861 2.2e-46 190.7 387 33.9
THA.LOC104809995 Tarenaya hassleriana HOM05D000283 ORTHO05D004861 2.9e-46 190.3 370 33.5
GSVIVG01032634001 Vitis vinifera HOM05D000283 ORTHO05D004861 2.9e-46 190.3 370 33.2
TWI63G0514 Tripterygium wilfordii HOM05D000283 ORTHO05D004861 3.7e-46 189.9 368 33.7
ClCG02G013690 Citrullus lanatus HOM05D000283 ORTHO05D004861 6.4e-46 189.1 402 32.3
HPP92_016703 Vanilla planifolia HOM05D000283 ORTHO05D004861 6.4e-46 189.1 369 33.9
AagrBONN_evm.TU.Sc2ySwM_228.2194 Anthoceros agrestis HOM05D000283 ORTHO05D004861 8.3e-46 188.7 397 32.0
Aqoxy4G03100 Aquilegia oxysepala HOM05D000283 ORTHO05D004861 8.3e-46 188.7 402 32.3
CSS0021401 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 8.3e-46 188.7 372 34.4
MELO3C011710.2 Cucumis melo HOM05D000283 ORTHO05D004861 1.4e-45 188.0 402 31.8
Atru.BG.269.p Acer truncatum HOM05D000283 ORTHO05D004861 1.9e-45 187.6 401 33.2
Actinidia13845 Actinidia chinensis HOM05D000283 ORTHO05D004861 1.9e-45 187.6 403 33.7
CsaV3_5G006500 Cucumis sativus L. HOM05D000283 ORTHO05D004861 2.4e-45 187.2 402 31.8
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 2.4e-45 187.2 372 33.9
SGA_v2.0_scaffold426G51499 Striga asiatica HOM05D000283 ORTHO05D004861 2.4e-45 187.2 410 31.5
HanXRQChr15g0496791 Helianthus annuus HOM05D000283 ORTHO05D004861 3.2e-45 186.8 399 32.1
CANSAT56G1270 Cannabis sativa HOM05D000283 ORTHO05D004861 5.4e-45 186.0 400 32.0
Potri.008G047300 Populus trichocarpa HOM05D000283 ORTHO05D004861 5.4e-45 186.0 401 31.9
Zm00001eb282460 Zea mays HOM05D000283 ORTHO05D004861 7.1e-45 185.7 400 32.5
AT3G55070 Arabidopsis thaliana HOM05D000283 ORTHO05D004861 1.2e-44 184.9 401 33.2
Gohir.A05G343200 Gossypium hirsutum HOM05D000283 ORTHO05D004861 2.1e-44 184.1 396 32.3
Gohir.A10G208700 Gossypium hirsutum HOM05D000283 ORTHO05D004861 2.1e-44 184.1 402 31.6
Gorai.012G092000 Gossypium raimondii HOM05D000283 ORTHO05D004861 2.1e-44 184.1 403 32.3
Gohir.D04G081100 Gossypium hirsutum HOM05D000283 ORTHO05D004861 2.7e-44 183.7 403 32.0
MBI05_g05301_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D004861 3.5e-44 183.3 392 31.9
Sed0007781 Sechium edule HOM05D000283 ORTHO05D004861 4.6e-44 183.0 404 32.2
ATR0810G097 Amborella trichopoda HOM05D000283 ORTHO05D004861 6.0e-44 182.6 375 32.0
CARHR165090 Cardamine hirsuta HOM05D000283 ORTHO05D004861 6.0e-44 182.6 402 33.6
Gohir.D10G217000 Gossypium hirsutum HOM05D000283 ORTHO05D004861 6.0e-44 182.6 402 31.6
AL5G36190 Arabidopsis lyrata HOM05D000283 ORTHO05D004861 1.7e-43 181.0 370 33.8
Haze_16966 Corylus avellana HOM05D000283 ORTHO05D004861 1.7e-43 181.0 385 32.7
FAN01G0780 Fragaria x ananassa HOM05D000283 ORTHO05D004861 1.7e-43 181.0 401 32.4
Nn2g12826 Nelumbo nucifera HOM05D000283 ORTHO05D004861 3.0e-43 180.3 402 32.3
TAR633G2156 Trochodendron aralioides HOM05D000283 ORTHO05D004861 3.9e-43 179.9 370 31.6
Lsat_1_v5_gn_9_66761 Lactuca sativa HOM05D000283 ORTHO05D004861 5.1e-43 179.5 364 33.2
Psat6g239360 Pisum sativum HOM05D000283 ORTHO05D004861 1.1e-42 178.3 289 37.4
Aa31LG10G10070 Aethionema arabicum HOM05D000283 ORTHO05D004861 1.5e-42 177.9 370 33.5
Gorai.011G242600 Gossypium raimondii HOM05D000283 ORTHO05D004861 1.5e-42 177.9 360 32.5
Nitab4.5_0007221g0020 Nicotiana tabacum HOM05D000283 ORTHO05D004861 4.3e-42 176.4 400 32.5
Carub.0005s2170 Capsella rubella HOM05D000283 ORTHO05D004861 5.6e-42 176.0 401 32.2
CiPaw.02G178300 Carya illinoinensis HOM05D000283 ORTHO05D004861 7.3e-42 175.6 401 30.9
Thhalv10010415m.g Eutrema salsugineum HOM05D000283 ORTHO05D004861 1.2e-41 174.9 371 33.2
BcaC02g09720 Brassica carinata HOM05D000283 ORTHO05D004861 2.8e-41 173.7 388 32.0
A04p04850 Brassica napus HOM05D000283 ORTHO05D004861 2.8e-41 173.7 388 32.0
C04p37350 Brassica napus HOM05D000283 ORTHO05D004861 2.8e-41 173.7 388 32.0
BraA04t16198Z Brassica rapa HOM05D000283 ORTHO05D004861 2.8e-41 173.7 388 32.0
BolC4t25299H Brassica oleracea HOM05D000283 ORTHO05D004861 8.1e-41 172.2 388 31.7
C08p30310 Brassica napus HOM05D000283 ORTHO05D004861 2.4e-40 170.6 390 32.8
Sc20g0002340 Simmondsia chinensis HOM05D000283 ORTHO05D004861 2.4e-40 170.6 289 36.7
FAN01G0258 Fragaria x ananassa HOM05D000283 ORTHO05D004861 6.8e-40 169.1 407 31.9
Os05g0160100 Oryza sativa ssp. japonica HOM05D000283 ORTHO05D004861 6.8e-40 169.1 403 31.3
Sp5g07350 Schrenkiella parvula HOM05D000283 ORTHO05D004861 6.8e-40 169.1 370 32.7
Ah.10g033170 Amaranthus hybridus HOM05D000283 ORTHO05D004861 8.9e-40 168.7 391 30.2
A09p48090 Brassica napus HOM05D000283 ORTHO05D004861 1.2e-39 168.3 390 32.3
BraA09t40263Z Brassica rapa HOM05D000283 ORTHO05D004861 1.2e-39 168.3 390 32.1
FAN03G0565 Fragaria x ananassa HOM05D000283 ORTHO05D004861 1.2e-39 168.3 395 31.4
Sabra08G0033500 Salix brachista HOM05D000283 ORTHO05D004861 1.5e-39 167.9 401 31.2
BcaB01g00131 Brassica carinata HOM05D000283 ORTHO05D004861 2.0e-39 167.5 402 32.1
Manes.07G106200 Manihot esculenta HOM05D000283 ORTHO05D004861 2.0e-39 167.5 289 36.0
Ah.16g108160 Amaranthus hybridus HOM05D000283 ORTHO05D004861 4.4e-39 166.4 328 35.7
BcaC07g39830 Brassica carinata HOM05D000283 ORTHO05D004861 1.3e-38 164.9 390 31.8
BolC8t50654H Brassica oleracea HOM05D000283 ORTHO05D004861 2.2e-38 164.1 390 31.8
Cpa.g.sc1.298 Carica papaya HOM05D000283 ORTHO05D004861 2.2e-38 164.1 382 31.4
QL08p057473 Quercus lobata HOM05D000283 ORTHO05D004861 3.8e-38 163.3 289 36.0
unitig_0.g2403 Utricularia gibba HOM05D000283 ORTHO05D004861 4.9e-38 162.9 336 32.7
SMO111G0010 Selaginella moellendorffii HOM05D000283 ORTHO05D004861 6.4e-38 162.5 363 31.7
Duzib114G0902 Durio zibethinus HOM05D000283 ORTHO05D004861 3.0e-35 153.7 403 29.8
Sabra10G0165600 Salix brachista HOM05D000283 ORTHO05D004861 8.1e-33 145.6 465 27.1
TPR.G10404 Trifolium pratense HOM05D000283 ORTHO05D004861 9.0e-32 142.1 244 36.1
Rhsim09G0155700 Rhododendron simsii HOM05D000283 ORTHO05D004861 2.0e-31 141.0 537 25.9
CBR_g863 Chara braunii HOM05D000283 ORTHO05D004861 9.3e-29 132.1 248 33.9
Cre03.g144867 Chlamydomonas reinhardtii HOM05D000283 ORTHO05D004861 7.8e-28 129.0 268 37.7
EL10Ac2g03514 Beta vulgaris HOM05D000283 ORTHO05D004861 3.3e-26 123.6 390 27.9
MD01G1115600 Malus domestica HOM05D000283 ORTHO05D004861 7.3e-26 122.5 271 32.1
CSS0031096 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 5.3e-24 116.3 202 35.1
CSS0033958 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 1.2e-23 115.2 202 34.7
CSS0043771 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 1.2e-23 115.2 202 34.7
SHI28210 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-22 109.4 190 36.3
Actinidia29196 Actinidia chinensis HOM05D000283 ORTHO05D004861 2.1e-20 104.4 192 37.0
Actinidia38228 Actinidia chinensis HOM05D000283 ORTHO05D004861 3.9e-19 100.1 260 32.3
BcaB05g23770 Brassica carinata HOM05D000283 ORTHO05D004861 1.4e-16 91.7 247 29.1
CSS0019692 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 4.5e-15 86.7 222 31.5
CSS0006131 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 2.9e-14 84.0 222 31.1
BcaB04g19121 Brassica carinata HOM05D000283 ORTHO05D004861 1.9e-13 81.3 304 27.0
BolC6t37451H Brassica oleracea HOM05D000283 ORTHO05D004861 1.8e-11 74.7 196 30.6
CDE05G1554 Ceratophyllum demersum HOM05D000283 ORTHO05D004861 2.8e-09 67.4 168 29.8
Pp3c23_20850 Physcomitrium patens HOM05D002845 ORTHO05D003180 5.3e-08 63.2 192 27.1
CARHR203750 Cardamine hirsuta HOM05D002845 ORTHO05D003180 4.5e-07 60.1 180 24.4
arahy.Tifrunner.gnm1.ann1.VU08LY Arachis hypogaea HOM05D002845 ORTHO05D003180 5.8e-07 59.7 243 25.1
AUR62010991 Chenopodium quinoa HOM05D002845 ORTHO05D003180 1.7e-06 58.2 179 25.7
Peaxi162Scf00152g00711 Petunia axillaris HOM05D002845 ORTHO05D003180 1.7e-06 58.2 176 25.6
PRCOL_00005225 Prasinoderma coloniale HOM05D000283 ORTHO05D004861 1.7e-06 58.2 208 30.3
AUR62021502 Chenopodium quinoa HOM05D002845 ORTHO05D003180 2.2e-06 57.8 179 25.1
CSS0043655 Camellia sinensis var. sinensis HOM05D002845 ORTHO05D003180 3.8e-06 57.0 346 23.1
VMungo0540G0030 Vigna mungo HOM05D002845 ORTHO05D003180 3.8e-06 57.0 179 25.1
Lalb_Chr20g0122731 Lupinus albus HOM05D002845 ORTHO05D003180 4.9e-06 56.6 179 24.6
QL11p027556 Quercus lobata HOM05D002845 ORTHO05D003180 4.9e-06 56.6 179 25.1
PGSC0003DMG400030664 Solanum tuberosum HOM05D002845 ORTHO05D003180 4.9e-06 56.6 229 24.9
CSS0029732 Camellia sinensis var. sinensis HOM05D002845 ORTHO05D003180 6.5e-06 56.2 232 24.6
CSS0030575 Camellia sinensis var. sinensis HOM05D002845 ORTHO05D003180 6.5e-06 56.2 232 24.6
Rhsim05G0095200 Rhododendron simsii HOM05D002845 ORTHO05D003180 6.5e-06 56.2 259 22.8
Ah.14g082070 Amaranthus hybridus HOM05D002845 ORTHO05D003180 8.4e-06 55.8 176 23.3
Cpa.g.sc20.54 Carica papaya HOM05D002845 ORTHO05D003180 8.4e-06 55.8 179 25.1


User provided reference genes

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