Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa015458 Carpinus fangiana HOM05D006184 ORTHO05D007862 0.0e+00 1167.9 570 100.0
Cfa011654 Carpinus fangiana HOM05D006184 ORTHO05D007862 0.0e+00 1108.2 615 89.6
CiPaw.13G080700 Carya illinoinensis HOM05D006184 ORTHO05D007862 6.1e-308 1060.1 613 85.8
QL01p026813 Quercus lobata HOM05D006184 ORTHO05D007862 2.9e-305 1051.2 615 84.4
COL.COLO4_19110 Corchorus olitorius HOM05D006184 ORTHO05D007862 2.4e-304 1048.1 613 83.8
Thecc.09G305300 Theobroma cacao HOM05D006184 ORTHO05D007862 5.4e-304 1047.0 613 83.7
Duzib168G0250 Durio zibethinus HOM05D006184 ORTHO05D007862 3.5e-303 1044.3 613 83.4
Gorai.003G124300 Gossypium raimondii HOM05D006184 ORTHO05D007862 8.6e-302 1039.6 612 83.2
Gohir.A03G049500 Gossypium hirsutum HOM05D006184 ORTHO05D007862 1.5e-301 1038.9 612 83.2
Gohir.D03G117800 Gossypium hirsutum HOM05D006184 ORTHO05D007862 2.5e-301 1038.1 612 83.0
VMungo0540G2418 Vigna mungo HOM05D006184 ORTHO05D007862 3.1e-299 1031.2 613 81.9
Phvul.006G065300 Phaseolus vulgaris HOM05D006184 ORTHO05D007862 6.8e-299 1030.0 613 82.1
Prupe.6G060700 Prunus persica HOM05D006184 ORTHO05D007862 1.5e-298 1028.9 612 82.2
Atru.chr3.4272 Acer truncatum HOM05D006184 ORTHO05D007862 5.8e-298 1026.9 614 82.2
FvH4_3g38200 Fragaria vesca HOM05D006184 ORTHO05D007862 7.5e-298 1026.5 616 81.8
Lj6g0009842 Lotus japonicus HOM05D006184 ORTHO05D007862 9.8e-298 1026.2 613 81.9
arahy.Tifrunner.gnm1.ann1.F7MUQP Arachis hypogaea HOM05D006184 ORTHO05D007862 1.7e-297 1025.4 613 82.2
FAN16G1207 Fragaria x ananassa HOM05D006184 ORTHO05D007862 2.9e-297 1024.6 620 81.3
RcHm_v2.0_Chr5g0068641 Rosa chinensis HOM05D006184 ORTHO05D007862 4.9e-297 1023.8 616 81.5
FAN21G1896 Fragaria x ananassa HOM05D006184 ORTHO05D007862 6.4e-297 1023.5 621 81.0
Lalb_Chr17g0345001 Lupinus albus HOM05D006184 ORTHO05D007862 6.4e-297 1023.5 613 81.9
MD11G1080300 Malus domestica HOM05D006184 ORTHO05D007862 1.1e-296 1022.7 613 81.4
arahy.Tifrunner.gnm1.ann1.N1U5TX Arachis hypogaea HOM05D006184 ORTHO05D007862 1.9e-296 1021.9 618 81.6
Hma1.2p1_0227F.1_g096310 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 4.1e-296 1020.8 612 81.7
FAN11G1847 Fragaria x ananassa HOM05D006184 ORTHO05D007862 7.1e-296 1020.0 616 81.3
FAN25G1982 Fragaria x ananassa HOM05D006184 ORTHO05D007862 1.2e-295 1019.2 616 81.5
MD03G1074000 Malus domestica HOM05D006184 ORTHO05D007862 3.5e-295 1017.7 613 81.2
Medtr3g462950 Medicago truncatula HOM05D006184 ORTHO05D007862 6.0e-295 1016.9 614 81.3
Ciclev10027988m.g Citrus clementina HOM05D006184 ORTHO05D007862 1.0e-294 1016.1 612 81.7
Manes.01G164200 Manihot esculenta HOM05D006184 ORTHO05D007862 1.0e-294 1016.1 618 81.9
Manes.02G121696 Manihot esculenta HOM05D006184 ORTHO05D007862 1.3e-294 1015.8 618 81.6
Ca_14911_v3 Cicer arietinum L. HOM05D006184 ORTHO05D007862 3.0e-294 1014.6 613 80.8
GSVIVG01024789001 Vitis vinifera HOM05D006184 ORTHO05D007862 3.9e-294 1014.2 610 81.6
Glyma.18G065700 Glycine max HOM05D006184 ORTHO05D007862 5.1e-294 1013.8 613 81.4
CsaV3_1G036050 Cucumis sativus L. HOM05D006184 ORTHO05D007862 6.6e-294 1013.4 617 81.0
PGR102G1950 Punica granatum HOM05D006184 ORTHO05D007862 6.6e-294 1013.4 616 80.5
Eucgr.B02273 Eucalyptus grandis HOM05D006184 ORTHO05D007862 1.9e-293 1011.9 613 81.6
Medtr3g462970 Medicago truncatula HOM05D006184 ORTHO05D007862 3.3e-293 1011.1 613 80.6
TAR633G0598 Trochodendron aralioides HOM05D006184 ORTHO05D007862 4.3e-293 1010.7 610 81.0
Lj1A141T56 Lonicera japonica HOM05D006184 ORTHO05D007862 7.3e-293 1010.0 612 80.1
Haze_24258 Corylus avellana HOM05D006184 ORTHO05D007862 1.6e-292 1008.8 615 83.3
MELO3C020563.2 Cucumis melo HOM05D006184 ORTHO05D007862 1.4e-291 1005.7 615 80.0
ClCG03G000880 Citrullus lanatus HOM05D006184 ORTHO05D007862 2.3e-291 1005.0 610 80.7
Sed0012033 Sechium edule HOM05D006184 ORTHO05D007862 2.3e-291 1005.0 612 80.6
Psat5g162200 Pisum sativum HOM05D006184 ORTHO05D007862 5.2e-291 1003.8 613 79.9
AUR62001683 Chenopodium quinoa HOM05D006184 ORTHO05D007862 1.2e-290 1002.7 613 79.4
EL10Ac7g16128 Beta vulgaris HOM05D006184 ORTHO05D007862 5.8e-290 1000.3 613 79.6
Ah.15g099710 Amaranthus hybridus HOM05D006184 ORTHO05D007862 2.2e-289 998.4 613 79.9
MBI05_g03463_MAGBIO Magnolia biondii HOM05D006184 ORTHO05D007862 2.2e-289 998.4 615 80.3
DCAR_007390 Daucus carota HOM05D006184 ORTHO05D007862 3.7e-289 997.7 616 79.1
CSS0002743 Camellia sinensis var. sinensis HOM05D006184 ORTHO05D007862 1.9e-288 995.3 612 80.1
AUR62020099 Chenopodium quinoa HOM05D006184 ORTHO05D007862 4.1e-288 994.2 614 78.7
AT2G29630 Arabidopsis thaliana HOM05D006184 ORTHO05D007862 5.4e-288 993.8 610 79.2
Cc01_g13950 Coffea canephora HOM05D006184 ORTHO05D007862 7.1e-288 993.4 612 79.1
ECA248G3465 Erigeron canadensis HOM05D006184 ORTHO05D007862 9.2e-288 993.0 612 79.1
Cpa.g.sc112.53 Carica papaya HOM05D006184 ORTHO05D007862 1.2e-287 992.6 613 80.3
Nn2g13623 Nelumbo nucifera HOM05D006184 ORTHO05D007862 1.6e-287 992.3 612 79.1
Carub.0004s1072 Capsella rubella HOM05D006184 ORTHO05D007862 2.1e-287 991.9 611 78.6
Actinidia38827 Actinidia chinensis HOM05D006184 ORTHO05D007862 2.7e-287 991.5 612 80.1
Aqoxy4G02661 Aquilegia oxysepala HOM05D006184 ORTHO05D007862 2.7e-287 991.5 612 79.2
AL4G24380 Arabidopsis lyrata HOM05D006184 ORTHO05D007862 2.7e-287 991.5 611 78.7
Oeu009379.1 Olea europaea HOM05D006184 ORTHO05D007862 3.5e-287 991.1 612 78.8
Hund04886 Selenicereus undatus HOM05D006184 ORTHO05D007862 4.6e-287 990.7 616 79.1
HanXRQChr13g0388411 Helianthus annuus HOM05D006184 ORTHO05D007862 7.8e-287 989.9 613 79.6
Sp4g12340 Schrenkiella parvula HOM05D006184 ORTHO05D007862 7.8e-287 989.9 614 78.0
HanXRQChr10g0298731 Helianthus annuus HOM05D006184 ORTHO05D007862 1.0e-286 989.6 617 79.1
Glyma.11G176200 Glycine max HOM05D006184 ORTHO05D007862 3.0e-286 988.0 613 79.4
BcaB02g10267 Brassica carinata HOM05D006184 ORTHO05D007862 6.6e-286 986.9 615 78.5
Thhalv10016370m.g Eutrema salsugineum HOM05D006184 ORTHO05D007862 6.6e-286 986.9 611 78.4
Rhsim13G0072000 Rhododendron simsii HOM05D006184 ORTHO05D007862 6.6e-286 986.9 612 78.6
SalBow2G2183 Salvia bowleyana HOM05D006184 ORTHO05D007862 6.6e-286 986.9 612 79.2
Sc12g0000880 Simmondsia chinensis HOM05D006184 ORTHO05D007862 8.6e-286 986.5 613 78.6
Lsat_1_v5_gn_5_158421 Lactuca sativa HOM05D006184 ORTHO05D007862 1.1e-285 986.1 616 78.2
CARHR122950 Cardamine hirsuta HOM05D006184 ORTHO05D007862 1.5e-285 985.7 617 78.0
Ah.08g220740 Amaranthus hybridus HOM05D006184 ORTHO05D007862 1.9e-285 985.3 613 78.5
Aa31LG5G7380 Aethionema arabicum HOM05D006184 ORTHO05D007862 3.3e-285 984.6 613 77.8
BcaC02g11044 Brassica carinata HOM05D006184 ORTHO05D007862 3.3e-285 984.6 617 78.3
C04p21210 Brassica napus HOM05D006184 ORTHO05D007862 3.3e-285 984.6 617 78.3
Dinv28618 Davidia involucrata HOM05D006184 ORTHO05D007862 5.6e-285 983.8 596 81.5
CDE03G0407 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 9.6e-285 983.0 615 78.2
BraA05t20491Z Brassica rapa HOM05D006184 ORTHO05D007862 1.2e-284 982.6 617 78.4
Nitab4.5_0001970g0070 Nicotiana tabacum HOM05D006184 ORTHO05D007862 1.2e-284 982.6 612 77.5
A05p15770 Brassica napus HOM05D006184 ORTHO05D007862 3.6e-284 981.1 617 78.3
Potri.009G043200 Populus trichocarpa HOM05D006184 ORTHO05D007862 4.7e-284 980.7 616 79.7
BolC4t23646H Brassica oleracea HOM05D006184 ORTHO05D007862 6.2e-284 980.3 617 78.0
Potri.001G249200 Populus trichocarpa HOM05D006184 ORTHO05D007862 2.4e-283 978.4 619 79.8
Nitab4.5_0000102g0140 Nicotiana tabacum HOM05D006184 ORTHO05D007862 3.1e-283 978.0 612 77.0
Solyc06g006080.3 Solanum lycopersicum HOM05D006184 ORTHO05D007862 1.2e-282 976.1 612 76.3
Sopen06g002030 Solanum pennellii HOM05D006184 ORTHO05D007862 1.2e-282 976.1 612 76.3
Sc06g0008420 Simmondsia chinensis HOM05D006184 ORTHO05D007862 3.8e-281 971.1 613 77.7
Peaxi162Scf00451g00511 Petunia axillaris HOM05D006184 ORTHO05D007862 4.9e-281 970.7 613 76.8
Sabra09G0030600 Salix brachista HOM05D006184 ORTHO05D007862 1.1e-280 969.5 563 84.4
MSTRG.24765 Avicennia marina HOM05D006184 ORTHO05D007862 1.9e-280 968.8 612 77.6
Peaxi162Scf00216g00033 Petunia axillaris HOM05D006184 ORTHO05D007862 7.1e-280 966.8 613 76.7
PGSC0003DMG400004151 Solanum tuberosum HOM05D006184 ORTHO05D007862 7.1e-280 966.8 612 75.8
Migut.G00281 Erythranthe guttata HOM05D006184 ORTHO05D007862 1.2e-279 966.1 616 77.6
ATR0564G389 Amborella trichopoda HOM05D006184 ORTHO05D007862 1.6e-279 965.7 613 78.3
TWI79G1750 Tripterygium wilfordii HOM05D006184 ORTHO05D007862 3.3e-277 958.0 613 77.7
Oeu049272.2 Olea europaea HOM05D006184 ORTHO05D007862 1.8e-275 952.2 680 70.3
Os03g0679700 Oryza sativa ssp. japonica HOM05D006184 ORTHO05D007862 6.4e-273 943.7 616 74.8
Zm00001eb051950 Zea mays HOM05D006184 ORTHO05D007862 2.4e-272 941.8 597 76.5
CDE04G0688 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 7.9e-271 936.8 557 81.3
CAN.G780.2 Capsicum annuum HOM05D006184 ORTHO05D007862 2.7e-263 911.8 612 72.7
SGA_v2.0_scaffold142G35644 Striga asiatica HOM05D006184 ORTHO05D007862 6.0e-263 910.6 615 73.5
SHI12345 Sapria himalayana HOM05D006184 ORTHO05D007862 1.3e-262 909.4 636 71.5
TPR.G13280 Trifolium pratense HOM05D006184 ORTHO05D007862 4.5e-258 894.4 613 73.4
HPP92_012628 Vanilla planifolia HOM05D006184 ORTHO05D007862 1.3e-249 866.3 513 81.5
Pp3c16_8630 Physcomitrium patens HOM05D006184 ORTHO05D007862 1.7e-249 865.9 552 75.4
Pp3c25_5720 Physcomitrium patens HOM05D006184 ORTHO05D007862 6.7e-246 854.0 610 68.7
Mapoly0078s0008 Marchantia polymorpha HOM05D006184 ORTHO05D007862 1.9e-245 852.4 596 70.3
AagrBONN_evm.TU.Sc2ySwM_117.2039 Anthoceros agrestis HOM05D006184 ORTHO05D007862 1.3e-244 849.7 605 69.4
SMO272G0033 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 1.0e-241 840.1 535 74.8
SMO165G0141 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 7.2e-240 833.9 528 75.0
CBR_g30996 Chara braunii HOM05D006184 ORTHO05D007862 2.3e-201 706.1 445 77.1
Cre05.g240850 Chlamydomonas reinhardtii HOM05D006184 ORTHO05D007862 1.1e-195 687.2 513 65.9
Sabra16G0151300 Salix brachista HOM05D006184 ORTHO05D007862 3.4e-165 585.9 425 72.5
Haze_26876 Corylus avellana HOM05D006184 ORTHO05D007862 6.9e-158 561.6 560 53.8
vmacro02987 Vaccinium macrocarpon HOM05D006184 ORTHO05D007862 9.0e-158 561.2 393 70.0
RcHm_v2.0_Chr5g0068681 Rosa chinensis HOM05D006184 ORTHO05D007862 2.3e-113 413.7 267 77.2
SMO165G0069 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 2.8e-95 353.6 531 41.2
SEGI_15306 Sequoiadendron giganteum HOM05D006184 ORTHO05D007862 3.0e-60 237.3 192 62.5
Nn2g11393 Nelumbo nucifera HOM05D006184 ORTHO05D007862 1.5e-51 208.4 99 96.0
Nn2g11392 Nelumbo nucifera HOM05D006184 ORTHO05D007862 4.9e-47 193.4 149 65.8
Actinidia16074 Actinidia chinensis HOM05D006184 ORTHO05D007862 1.5e-32 145.2 137 58.4
Nn2g11394 Nelumbo nucifera HOM05D006184 ORTHO05D049308 1.3e-28 132.1 73 83.6
RcHm_v2.0_Chr5g0068691 Rosa chinensis HOM05D006184 ORTHO05D049308 2.2e-23 114.8 63 88.9
Hma1.2p1_2020F.1_g311280 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 3.9e-20 104.0 53 92.5
Hma1.2p1_0315F.1_g122560 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 4.3e-19 100.5 53 90.6
Ah.02g117460 Amaranthus hybridus HOM05D000595 ORTHO05D004141 6.9e-09 66.6 32 96.9


User provided reference genes

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