Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014512 Carpinus fangiana HOM05D000246 ORTHO05D026750 9.3e-27 122.9 65 100.0
Cfa012648 Carpinus fangiana HOM05D000246 ORTHO05D007958 9.0e-22 106.3 60 95.0
Atru.chr6.2110 Acer truncatum HOM05D000246 ORTHO05D007958 1.5e-13 79.0 63 66.7
Prupe.5G018600 Prunus persica HOM05D000246 ORTHO05D007958 4.5e-13 77.4 60 65.0
Potri.003G104300 Populus trichocarpa HOM05D000246 ORTHO05D007958 8.4e-12 73.2 60 63.3
GSVIVG01036944001 Vitis vinifera HOM05D000246 ORTHO05D007958 1.4e-11 72.4 62 61.3
Lalb_Chr16g0380641 Lupinus albus HOM05D000246 ORTHO05D007958 5.5e-11 70.5 60 63.3
Nn1g09149 Nelumbo nucifera HOM05D000246 ORTHO05D007958 5.5e-11 70.5 62 64.5
Dinv09439 Davidia involucrata HOM05D000246 ORTHO05D007958 1.6e-10 68.9 62 61.3
TAR629G0378 Trochodendron aralioides HOM05D000246 ORTHO05D007958 3.5e-10 67.8 59 59.3
RcHm_v2.0_Chr7g0213961 Rosa chinensis HOM05D000246 ORTHO05D007958 1.0e-09 66.2 60 61.7
Phvul.002G126800 Phaseolus vulgaris HOM05D000246 ORTHO05D007958 1.3e-09 65.9 58 60.3
FvH4_5g24180 Fragaria vesca HOM05D000246 ORTHO05D007958 1.8e-09 65.5 60 61.7
FAN08G0258 Fragaria x ananassa HOM05D000246 ORTHO05D007958 1.8e-09 65.5 60 61.7
FAN13G2839 Fragaria x ananassa HOM05D000246 ORTHO05D007958 1.8e-09 65.5 60 61.7
FAN18G0721 Fragaria x ananassa HOM05D000246 ORTHO05D007958 1.8e-09 65.5 60 61.7
Lj2g0022743 Lotus japonicus HOM05D000246 ORTHO05D007958 5.1e-09 63.9 58 62.1
Medtr5g026590 Medicago truncatula HOM05D000246 ORTHO05D007958 5.1e-09 63.9 60 60.0
Peaxi162Scf00445g00914 Petunia axillaris HOM05D000246 ORTHO05D007958 6.7e-09 63.5 60 58.3
Nitab4.5_0000907g0030 Nicotiana tabacum HOM05D000246 ORTHO05D007958 1.1e-08 62.8 60 58.3
Psat2g143080 Pisum sativum HOM05D000246 ORTHO05D007958 1.5e-08 62.4 60 58.3
PGR042G2144 Punica granatum HOM05D000246 ORTHO05D007958 1.5e-08 62.4 62 56.5
MD00G1078900 Malus domestica HOM05D000246 ORTHO05D007958 1.9e-08 62.0 62 54.8
MBI04_g30770_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007958 2.5e-08 61.6 58 51.7
arahy.Tifrunner.gnm1.ann1.4RSR2I Arachis hypogaea HOM05D000246 ORTHO05D007958 3.3e-08 61.2 59 59.3
arahy.Tifrunner.gnm1.ann1.QS0FC1 Arachis hypogaea HOM05D000246 ORTHO05D007958 3.3e-08 61.2 59 59.3
VMungo1215G2022 Vigna mungo HOM05D000246 ORTHO05D007958 3.3e-08 61.2 58 55.2
TPR.G17252 Trifolium pratense HOM05D000246 ORTHO05D007958 4.3e-08 60.8 60 58.3
CSS0002005 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007958 5.7e-08 60.5 61 59.0
CSS0007497 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007958 5.7e-08 60.5 61 59.0
Sopen08g023200 Solanum pennellii HOM05D000246 ORTHO05D007958 5.7e-08 60.5 60 50.0
Aqoxy1G03783 Aquilegia oxysepala HOM05D000246 ORTHO05D026750 1.3e-07 59.3 59 50.8
Aqoxy3G01991 Aquilegia oxysepala HOM05D000246 ORTHO05D007958 1.3e-07 59.3 59 50.8
Actinidia03316 Actinidia chinensis HOM05D000246 ORTHO05D007958 2.2e-07 58.5 62 54.8
Solyc08g074600.4 Solanum lycopersicum HOM05D000246 ORTHO05D007958 2.8e-07 58.2 60 48.3
Migut.A00506 Erythranthe guttata HOM05D000246 ORTHO05D007958 3.7e-07 57.8 63 52.4
Hma1.2p1_1000F.1_g246410 Hydrangea macrophylla HOM05D000246 ORTHO05D026750 3.7e-07 57.8 60 50.0
Duzib205G1660 Durio zibethinus HOM05D000246 ORTHO05D007958 8.2e-07 56.6 62 51.6
CAN.G195.30 Capsicum annuum HOM05D000246 ORTHO05D007958 1.4e-06 55.8 61 54.1
TWI56G1093 Tripterygium wilfordii HOM05D000246 ORTHO05D007958 1.4e-06 55.8 62 53.2
COL.COLO4_35077 Corchorus olitorius HOM05D000246 ORTHO05D007958 1.8e-06 55.5 65 52.3
Manes.17G008200 Manihot esculenta HOM05D000246 ORTHO05D007958 1.8e-06 55.5 60 53.3
PSO063G2533 Papaver somniferum HOM05D000246 ORTHO05D007958 3.1e-06 54.7 60 51.7
Cc00_g05210 Coffea canephora HOM05D000246 ORTHO05D007958 6.9e-06 53.5 60 51.7
Gohir.A08G228200 Gossypium hirsutum HOM05D000246 ORTHO05D007958 6.9e-06 53.5 63 47.6
Gohir.D08G248500 Gossypium hirsutum HOM05D000246 ORTHO05D007958 6.9e-06 53.5 63 47.6
Gorai.004G265100 Gossypium raimondii HOM05D000246 ORTHO05D007958 6.9e-06 53.5 63 47.6


User provided reference genes

Program Settings