Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.8e-147 526.2 303 100.0
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 2.2e-129 466.1 291 88.0
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 1.2e-122 443.7 292 81.2
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 1.6e-119 433.3 293 77.1
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 1.6e-119 433.3 291 80.1
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 8.8e-118 427.6 291 75.3
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 8.8e-118 427.6 291 75.3
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 8.8e-118 427.6 291 75.3
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 1.1e-117 427.2 292 75.0
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 1.3e-116 423.7 292 80.5
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.7e-116 423.3 291 74.6
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.7e-116 422.2 291 74.2
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 4.8e-116 421.8 294 76.9
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 6.9e-115 417.9 292 79.5
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 9.1e-115 417.5 291 75.3
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 1.2e-114 417.2 291 72.2
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 3.4e-114 415.6 291 78.4
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 7.7e-114 414.5 292 79.1
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 7.7e-114 414.5 291 76.6
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 2.2e-113 412.9 294 75.9
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 2.9e-113 412.5 297 72.1
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 2.9e-113 412.5 292 78.4
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 5.0e-113 411.8 292 76.4
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 1.1e-112 410.6 292 76.0
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 1.4e-112 410.2 292 75.7
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 1.9e-112 409.8 291 73.2
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 5.5e-112 408.3 292 75.0
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 5.5e-112 408.3 292 78.4
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 7.2e-112 407.9 291 76.3
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 9.4e-112 407.5 292 75.3
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 1.6e-111 406.8 298 77.2
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.6e-111 406.8 292 74.7
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.1e-111 406.4 291 76.3
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 3.6e-111 405.6 292 76.4
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 4.7e-111 405.2 291 76.3
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 1.4e-110 403.7 292 74.0
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 1.4e-110 403.7 292 74.0
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 1.8e-110 403.3 291 72.9
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.3e-110 402.9 291 75.9
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 2.3e-110 402.9 291 71.1
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 3.0e-110 402.5 292 71.2
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 3.0e-110 402.5 292 71.2
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 5.2e-110 401.7 294 70.4
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 5.2e-110 401.7 292 73.3
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 5.2e-110 401.7 292 73.3
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 8.8e-110 401.0 305 74.8
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 8.8e-110 401.0 292 70.9
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 2.0e-109 399.8 292 75.0
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 2.6e-109 399.4 291 71.1
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 3.3e-109 399.1 294 69.7
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 5.7e-109 398.3 328 78.0
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.7e-108 396.7 291 73.2
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 2.2e-108 396.4 291 71.1
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 2.8e-108 396.0 291 75.9
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 1.1e-107 394.0 301 71.1
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.4e-107 393.7 299 71.9
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 2.4e-107 392.9 296 75.3
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 2.4e-107 392.9 295 76.3
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 3.1e-107 392.5 292 67.8
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 3.1e-107 392.5 292 71.2
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 3.1e-107 392.5 298 74.2
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 9.1e-107 391.0 295 75.6
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 5.9e-106 388.3 291 73.9
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 1.7e-105 386.7 294 72.1
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 2.9e-105 386.0 291 68.4
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 5.0e-105 385.2 296 73.0
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 6.5e-105 384.8 298 67.4
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 1.1e-104 384.0 294 70.1
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 7.2e-104 381.3 295 70.8
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 7.2e-104 381.3 291 69.4
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 7.2e-104 381.3 292 69.2
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 1.2e-103 380.6 290 69.0
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 2.7e-103 379.4 294 72.4
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 3.6e-103 379.0 294 73.5
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 3.6e-103 379.0 287 69.0
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 3.6e-103 379.0 299 67.6
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 1.4e-102 377.1 291 72.5
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 4.0e-102 375.6 336 61.6
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 5.2e-102 375.2 294 71.4
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 2.0e-101 373.2 294 66.0
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 3.3e-101 372.5 291 66.3
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 7.5e-101 371.3 349 61.6
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 1.3e-100 370.5 291 66.0
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 8.2e-100 367.9 292 66.8
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 3.5e-98 362.5 193 89.6
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 7.7e-98 361.3 296 65.2
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 1.0e-97 360.9 268 73.9
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 5.5e-96 355.1 305 63.0
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 1.4e-94 350.5 176 93.8
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 3.0e-94 349.4 194 85.1
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 2.6e-93 346.3 194 84.0
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 7.0e-91 338.2 309 61.5
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 2.9e-89 332.8 292 65.1
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 6.5e-89 331.6 175 89.1
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 2.8e-87 326.2 185 81.6
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.2e-82 310.8 323 52.9
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 1.2e-82 310.8 188 79.8
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 7.8e-82 308.1 279 63.4
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 2.1e-79 300.1 246 65.0
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 1.4e-75 287.3 265 56.2
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 6.2e-71 271.9 198 68.2
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 2.3e-70 270.0 145 89.0
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.3e-68 264.2 143 88.1
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 1.4e-67 260.8 136 91.2
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.2e-67 259.6 170 77.1
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.7e-65 253.8 301 51.5
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.3e-65 253.4 141 87.2
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 1.9e-64 250.4 305 50.5
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 7.3e-64 248.4 292 58.2
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 3.7e-60 236.1 287 46.0
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 1.5e-53 214.2 184 57.6
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.9e-44 183.3 174 58.0
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 6.4e-44 182.2 191 46.1
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 6.2e-39 165.6 187 42.8
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.8e-38 164.1 163 55.8
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 3.9e-33 146.4 157 60.5
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.5e-29 134.4 150 53.3
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.7e-28 131.0 181 39.2
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.1e-11 75.1 43 74.4
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 2.1e-10 70.9 42 85.7
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 4.3e-08 63.2 34 82.4


User provided reference genes

Program Settings