Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004660 Carpinus fangiana HOM05D002857 ORTHO05D007919 5.5e-56 220.7 110 100.0
Cfa004626 Carpinus fangiana HOM05D002857 ORTHO05D007919 4.4e-37 157.9 130 66.2
Potri.001G293600 Populus trichocarpa HOM05D002857 ORTHO05D007919 1.7e-33 146.0 125 64.0
Gohir.D02G204100 Gossypium hirsutum HOM05D002857 ORTHO05D007919 1.1e-32 143.3 125 65.6
TWI14G1369 Tripterygium wilfordii HOM05D002857 ORTHO05D007919 1.5e-32 142.9 125 62.4
Eucgr.G01218 Eucalyptus grandis HOM05D002857 ORTHO05D007919 1.9e-32 142.5 124 63.7
Manes.10G081500 Manihot esculenta HOM05D002857 ORTHO05D007919 2.5e-32 142.1 126 62.7
COL.COLO4_32514 Corchorus olitorius HOM05D002857 ORTHO05D007919 4.3e-32 141.4 125 65.6
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 5.6e-32 141.0 125 64.0
Gorai.005G231400 Gossypium raimondii HOM05D002857 ORTHO05D007919 1.2e-31 139.8 125 64.0
CsaV3_7G007810 Cucumis sativus L. HOM05D002857 ORTHO05D007919 2.8e-31 138.7 122 62.3
Ciclev10027948m.g Citrus clementina HOM05D002857 ORTHO05D007919 3.6e-31 138.3 128 62.5
MELO3C018521.2 Cucumis melo HOM05D002857 ORTHO05D007919 4.7e-31 137.9 122 62.3
QL11p030559 Quercus lobata HOM05D002857 ORTHO05D007919 6.2e-31 137.5 114 65.8
Glyma.11G001900 Glycine max HOM05D002857 ORTHO05D007919 8.1e-31 137.1 125 62.4
Peaxi162Scf00016g02932 Petunia axillaris HOM05D002857 ORTHO05D007919 8.1e-31 137.1 125 60.8
CiPaw.05G017900 Carya illinoinensis HOM05D002857 ORTHO05D007919 1.1e-30 136.7 124 61.3
AUR62030846 Chenopodium quinoa HOM05D002857 ORTHO05D007919 1.1e-30 136.7 127 59.8
Thhalv10011295m.g Eutrema salsugineum HOM05D002857 ORTHO05D007919 1.1e-30 136.7 125 60.0
ClCG02G006830 Citrullus lanatus HOM05D002857 ORTHO05D007919 1.4e-30 136.3 124 62.1
Dinv15808 Davidia involucrata HOM05D002857 ORTHO05D007919 1.4e-30 136.3 125 60.0
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 2.3e-30 135.6 118 61.9
Atru.chr5.2347 Acer truncatum HOM05D002857 ORTHO05D007919 3.1e-30 135.2 126 63.5
EL10Ac9g22200 Beta vulgaris HOM05D002857 ORTHO05D007919 3.1e-30 135.2 127 63.0
Cpa.g.sc106.47 Carica papaya HOM05D002857 ORTHO05D007919 4.0e-30 134.8 125 60.8
Lj1g0007638 Lotus japonicus HOM05D002857 ORTHO05D007919 4.0e-30 134.8 124 59.7
VMungo1215G1214 Vigna mungo HOM05D002857 ORTHO05D007919 4.0e-30 134.8 113 64.6
GSVIVG01037836001 Vitis vinifera HOM05D002857 ORTHO05D007919 4.0e-30 134.8 124 62.1
HanXRQChr16g0509311 Helianthus annuus HOM05D002857 ORTHO05D007919 5.2e-30 134.4 126 61.1
TAR381G0324 Trochodendron aralioides HOM05D002857 ORTHO05D007919 6.8e-30 134.0 118 62.7
C06p04750 Brassica napus HOM05D002857 ORTHO05D007919 8.9e-30 133.7 126 60.3
BraA06t23554Z Brassica rapa HOM05D002857 ORTHO05D007919 8.9e-30 133.7 126 59.5
Migut.B00487 Erythranthe guttata HOM05D002857 ORTHO05D007919 8.9e-30 133.7 113 63.7
MD05G1100500 Malus domestica HOM05D002857 ORTHO05D007919 8.9e-30 133.7 122 59.8
Sed0001102 Sechium edule HOM05D002857 ORTHO05D007919 8.9e-30 133.7 123 59.3
Solyc01g107010.3 Solanum lycopersicum HOM05D002857 ORTHO05D007919 8.9e-30 133.7 129 58.1
Sopen01g049280 Solanum pennellii HOM05D002857 ORTHO05D007919 8.9e-30 133.7 129 58.1
PGSC0003DMG400025743 Solanum tuberosum HOM05D002857 ORTHO05D007919 8.9e-30 133.7 129 58.1
Lsat_1_v5_gn_7_85120 Lactuca sativa HOM05D002857 ORTHO05D007919 1.2e-29 133.3 128 58.6
Phvul.002G051600 Phaseolus vulgaris HOM05D002857 ORTHO05D007919 1.2e-29 133.3 113 62.8
THA.LOC104803441 Tarenaya hassleriana HOM05D002857 ORTHO05D007919 1.2e-29 133.3 125 60.0
Ah.01g006990 Amaranthus hybridus HOM05D002857 ORTHO05D007919 1.5e-29 132.9 120 61.7
BcaB07g33450 Brassica carinata HOM05D002857 ORTHO05D007919 1.5e-29 132.9 125 58.4
BcaC08g43176 Brassica carinata HOM05D002857 ORTHO05D007919 2.0e-29 132.5 126 59.5
BolC6t35605H Brassica oleracea HOM05D002857 ORTHO05D007919 2.0e-29 132.5 126 59.5
FvH4_2g04350 Fragaria vesca HOM05D002857 ORTHO05D007919 2.0e-29 132.5 122 59.0
FAN24G3289 Fragaria x ananassa HOM05D002857 ORTHO05D007919 2.0e-29 132.5 122 59.0
arahy.Tifrunner.gnm1.ann1.Y568PT Arachis hypogaea HOM05D002857 ORTHO05D007919 2.6e-29 132.1 119 62.2
Nitab4.5_0008075g0070 Nicotiana tabacum HOM05D002857 ORTHO05D007919 2.6e-29 132.1 129 58.1
Sp1g36870 Schrenkiella parvula HOM05D002857 ORTHO05D007919 2.6e-29 132.1 121 60.3
A06p03460 Brassica napus HOM05D002857 ORTHO05D007919 3.4e-29 131.7 125 59.2
arahy.Tifrunner.gnm1.ann1.TT8B4F Arachis hypogaea HOM05D002857 ORTHO05D007919 4.4e-29 131.3 119 61.3
Hund00428 Selenicereus undatus HOM05D002857 ORTHO05D007919 4.4e-29 131.3 126 62.7
Psat4g227480 Pisum sativum HOM05D002857 ORTHO05D007919 5.8e-29 131.0 125 60.8
ECA236G3688 Erigeron canadensis HOM05D002857 ORTHO05D007919 7.5e-29 130.6 113 62.8
Nitab4.5_0001105g0030 Nicotiana tabacum HOM05D002857 ORTHO05D007919 7.5e-29 130.6 113 61.9
FAN27G0944 Fragaria x ananassa HOM05D002857 ORTHO05D007919 9.9e-29 130.2 122 57.4
Lj5A219G36 Lonicera japonica HOM05D002857 ORTHO05D007919 9.9e-29 130.2 125 56.8
Nn1g04560 Nelumbo nucifera HOM05D002857 ORTHO05D007919 9.9e-29 130.2 119 61.3
Aa31LG10G4140 Aethionema arabicum HOM05D002857 ORTHO05D007919 1.7e-28 129.4 125 56.8
AT1G49980 Arabidopsis thaliana HOM05D002857 ORTHO05D007919 1.7e-28 129.4 120 60.0
Carub.0001s3917 Capsella rubella HOM05D002857 ORTHO05D007919 1.7e-28 129.4 120 59.2
AUR62027007 Chenopodium quinoa HOM05D002857 ORTHO05D007919 1.7e-28 129.4 127 57.5
Oeu013792.1 Olea europaea HOM05D002857 ORTHO05D007919 1.7e-28 129.4 149 52.3
PSO675G1022 Papaver somniferum HOM05D002857 ORTHO05D007919 1.7e-28 129.4 113 61.9
Ca_24359_v3 Cicer arietinum L. HOM05D002857 ORTHO05D007919 2.9e-28 128.6 125 57.6
HPP92_015730 Vanilla planifolia HOM05D002857 ORTHO05D007919 2.9e-28 128.6 119 59.7
FAN20G2596 Fragaria x ananassa HOM05D002857 ORTHO05D007919 3.7e-28 128.3 122 56.6
RcHm_v2.0_Chr6g0253811 Rosa chinensis HOM05D002857 ORTHO05D007919 4.9e-28 127.9 122 58.2
Sc14g0002920 Simmondsia chinensis HOM05D002857 ORTHO05D007919 4.9e-28 127.9 121 57.9
Cc02_g19870 Coffea canephora HOM05D002857 ORTHO05D007919 8.3e-28 127.1 113 61.9
TPR.G8313 Trifolium pratense HOM05D002857 ORTHO05D007919 8.3e-28 127.1 112 62.5
SEGI_11563 Sequoiadendron giganteum HOM05D002857 ORTHO05D007919 1.4e-27 126.3 113 61.1
Aqoxy6G02627 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 1.9e-27 125.9 113 60.2
CARHR040030 Cardamine hirsuta HOM05D002857 ORTHO05D007919 1.9e-27 125.9 126 56.3
AL1G57540 Arabidopsis lyrata HOM05D002857 ORTHO05D007919 2.4e-27 125.6 120 57.5
Lalb_Chr05g0210781 Lupinus albus HOM05D002857 ORTHO05D007919 2.4e-27 125.6 122 57.4
Prupe.8G144900 Prunus persica HOM05D002857 ORTHO05D007919 3.2e-27 125.2 119 58.0
ATR1153G103 Amborella trichopoda HOM05D002857 ORTHO05D007919 4.1e-27 124.8 125 55.2
PGR042G1700 Punica granatum HOM05D002857 ORTHO05D007919 1.6e-26 122.9 113 61.9
SGA_v2.0_scaffold225G43045 Striga asiatica HOM05D002857 ORTHO05D007919 1.6e-26 122.9 127 58.3
Medtr5g005030 Medicago truncatula HOM05D002857 ORTHO05D007919 2.1e-26 122.5 119 56.3
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 2.1e-26 122.5 119 56.3
DCAR_021953 Daucus carota HOM05D002857 ORTHO05D007919 3.5e-26 121.7 124 55.6
CDE04G2933 Ceratophyllum demersum HOM05D002857 ORTHO05D007919 3.9e-25 118.2 119 54.6
Haze_10221 Corylus avellana HOM05D002857 ORTHO05D007919 2.8e-23 112.1 92 65.2
FAN15G1619 Fragaria x ananassa HOM05D000062 ORTHO05D007919 3.1e-22 108.6 115 53.0
vmacro19533 Vaccinium macrocarpon HOM05D002857 ORTHO05D007919 3.1e-22 108.6 92 63.0
Thecc.02G117100 Theobroma cacao HOM05D002857 ORTHO05D007919 5.2e-22 107.8 92 64.1
Glyma.01G242400 Glycine max HOM05D002857 ORTHO05D007919 1.2e-21 106.7 93 61.3
SpUN0137_0010 Schrenkiella parvula HOM05D002857 ORTHO05D007919 2.6e-21 105.5 91 63.7
CBR_g41215 Chara braunii HOM05D002857 ORTHO05D007919 4.4e-21 104.8 111 52.3
SMO364G0103 Selaginella moellendorffii HOM05D002857 ORTHO05D007919 7.6e-21 104.0 122 47.5
PSO541G1205 Papaver somniferum HOM05D002857 ORTHO05D007919 2.9e-20 102.1 93 58.1
Gohir.A03G182500 Gossypium hirsutum HOM05D002857 ORTHO05D007919 6.0e-18 94.4 80 62.5
SHI27438 Sapria himalayana HOM05D002857 ORTHO05D007919 6.6e-17 90.9 93 53.8
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 1.2e-15 86.7 148 39.2
AUR62036501 Chenopodium quinoa HOM05D002857 ORTHO05D007919 3.1e-14 82.0 77 55.8
Os03g0616300 Oryza sativa ssp. japonica HOM05D002857 ORTHO05D007919 1.5e-13 79.7 101 44.6
Cre02.g079850 Chlamydomonas reinhardtii HOM05D002857 ORTHO05D007919 2.0e-13 79.3 110 43.6
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 8.4e-12 73.9 102 45.1
Sc14g0002950 Simmondsia chinensis HOM05D002857 ORTHO05D007919 6.6e-09 64.3 41 65.9
CDE06G0830 Ceratophyllum demersum HOM05D002857 ORTHO05D007919 3.6e-07 58.5 76 47.4
MCO07G531 Micromonas commoda HOM05D002857 ORTHO05D007919 3.6e-07 58.5 103 36.9
Cfa026792 Carpinus fangiana HOM05D002857 ORTHO05D007919 2.4e-06 55.8 92 41.3
Cc02_g19880 Coffea canephora HOM05D002857 ORTHO05D007919 9.0e-06 53.9 107 37.4


User provided reference genes

Program Settings