Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g07670 Coffea canephora HOM05D005263 ORTHO05D006891 8.3e-94 347.1 178 100.0
Cc07_g01440 Coffea canephora HOM05D005263 ORTHO05D006891 4.2e-53 211.8 116 93.1
PGR142G1885 Punica granatum HOM05D005263 ORTHO05D006891 1.6e-52 209.9 116 91.4
CiPaw.03G000200 Carya illinoinensis HOM05D005263 ORTHO05D006891 6.0e-52 208.0 123 84.6
FvH4_6g54430 Fragaria vesca HOM05D005263 ORTHO05D006891 1.3e-51 206.8 116 89.7
FAN02G2182 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.3e-51 206.8 116 89.7
FAN05G5194 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.3e-51 206.8 116 89.7
FAN14G4399 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.3e-51 206.8 116 89.7
Hma1.2p1_0265F.1_g106760 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 2.3e-51 206.1 116 90.5
Hma1.2p1_0265F.1_g106770 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 2.3e-51 206.1 116 90.5
Dinv33264 Davidia involucrata HOM05D005263 ORTHO05D006891 3.0e-51 205.7 116 88.8
CANSAT64G2729 Cannabis sativa HOM05D005263 ORTHO05D006891 3.9e-51 205.3 116 88.8
Haze_14959 Corylus avellana HOM05D005263 ORTHO05D006891 6.7e-51 204.5 116 89.7
Lj1g0009319 Lotus japonicus HOM05D005263 ORTHO05D006891 6.7e-51 204.5 116 88.8
QL02p068698 Quercus lobata HOM05D005263 ORTHO05D006891 6.7e-51 204.5 116 89.7
TWI60G0166 Tripterygium wilfordii HOM05D005263 ORTHO05D006891 6.7e-51 204.5 116 88.8
RcHm_v2.0_Chr2g0176681 Rosa chinensis HOM05D005263 ORTHO05D006891 1.5e-50 203.4 116 87.9
Eucgr.I01574 Eucalyptus grandis HOM05D005263 ORTHO05D006891 1.9e-50 203.0 116 87.1
Manes.11G073900 Manihot esculenta HOM05D005263 ORTHO05D006891 2.5e-50 202.6 116 87.9
Prupe.3G314900 Prunus persica HOM05D005263 ORTHO05D006891 2.5e-50 202.6 116 87.9
Actinidia05377 Actinidia chinensis HOM05D005263 ORTHO05D006891 4.3e-50 201.8 113 89.4
Actinidia36248 Actinidia chinensis HOM05D005263 ORTHO05D006891 4.3e-50 201.8 116 87.9
EL10Ac6g13898 Beta vulgaris HOM05D005263 ORTHO05D006891 5.6e-50 201.4 138 73.9
Medtr7g084560 Medicago truncatula HOM05D005263 ORTHO05D006891 1.3e-49 200.3 116 86.2
arahy.Tifrunner.gnm1.ann1.J2Y82Q Arachis hypogaea HOM05D005263 ORTHO05D006891 1.6e-49 199.9 116 86.2
arahy.Tifrunner.gnm1.ann1.R16MRH Arachis hypogaea HOM05D005263 ORTHO05D006891 1.6e-49 199.9 116 86.2
Cpa.g.sc70.43 Carica papaya HOM05D005263 ORTHO05D006891 1.6e-49 199.9 116 86.2
MD17G1004500 Malus domestica HOM05D005263 ORTHO05D006891 1.6e-49 199.9 116 86.2
Hund04127 Selenicereus undatus HOM05D005263 ORTHO05D006891 1.6e-49 199.9 113 86.7
FAN09G1249 Fragaria x ananassa HOM05D005263 ORTHO05D006891 2.1e-49 199.5 124 83.9
Potri.014G145000 Populus trichocarpa HOM05D005263 ORTHO05D006891 2.1e-49 199.5 116 85.3
MSTRG.3034 Avicennia marina HOM05D005263 ORTHO05D006891 2.8e-49 199.1 116 87.1
AUR62017472 Chenopodium quinoa HOM05D005263 ORTHO05D006891 2.8e-49 199.1 114 86.8
Migut.F00003 Erythranthe guttata HOM05D005263 ORTHO05D006891 2.8e-49 199.1 116 86.2
Nitab4.5_0002901g0080 Nicotiana tabacum HOM05D005263 ORTHO05D006891 3.7e-49 198.7 115 86.1
PSO017G0637 Papaver somniferum HOM05D005263 ORTHO05D006891 3.7e-49 198.7 116 85.3
PSO478G0722 Papaver somniferum HOM05D005263 ORTHO05D006891 3.7e-49 198.7 116 85.3
SGA_v2.0_scaffold122G33171 Striga asiatica HOM05D005263 ORTHO05D006891 3.7e-49 198.7 116 85.3
Atru.chr6.2720 Acer truncatum HOM05D005263 ORTHO05D006891 4.8e-49 198.4 116 85.3
DCAR_000962 Daucus carota HOM05D005263 ORTHO05D006891 4.8e-49 198.4 116 84.5
Gohir.A09G000037 Gossypium hirsutum HOM05D005263 ORTHO05D006891 4.8e-49 198.4 116 84.5
Gohir.D09G000101 Gossypium hirsutum HOM05D005263 ORTHO05D006891 4.8e-49 198.4 116 84.5
Gorai.006G000100 Gossypium raimondii HOM05D005263 ORTHO05D006891 4.8e-49 198.4 116 84.5
Glyma.16G046000 Glycine max HOM05D005263 ORTHO05D006891 6.2e-49 198.0 117 84.6
Solyc02g094590.3 Solanum lycopersicum HOM05D005263 ORTHO05D006891 6.2e-49 198.0 116 86.2
Sopen02g039240 Solanum pennellii HOM05D005263 ORTHO05D006891 6.2e-49 198.0 116 86.2
Sabra02G0180900 Salix brachista HOM05D005263 ORTHO05D006891 8.1e-49 197.6 116 85.3
SalBow4G2620 Salvia bowleyana HOM05D005263 ORTHO05D006891 8.1e-49 197.6 116 85.3
SGA_v2.0_scaffold274G46524 Striga asiatica HOM05D005263 ORTHO05D006891 8.1e-49 197.6 116 84.5
GSVIVG01032955001 Vitis vinifera HOM05D005263 ORTHO05D006891 8.1e-49 197.6 116 87.1
CARHR074870 Cardamine hirsuta HOM05D005263 ORTHO05D006891 1.1e-48 197.2 116 82.8
CsaV3_5G021940 Cucumis sativus L. HOM05D005263 ORTHO05D006891 1.1e-48 197.2 116 85.3
Lj7C619G12 Lonicera japonica HOM05D005263 ORTHO05D006891 1.1e-48 197.2 117 82.9
Rhsim10G0000700 Rhododendron simsii HOM05D005263 ORTHO05D006891 1.1e-48 197.2 119 81.5
Sabra14G0109200 Salix brachista HOM05D005263 ORTHO05D006891 1.1e-48 197.2 116 84.5
ClCG01G007920 Citrullus lanatus HOM05D005263 ORTHO05D006891 1.4e-48 196.8 116 84.5
MELO3C005086.2 Cucumis melo HOM05D005263 ORTHO05D006891 1.4e-48 196.8 116 84.5
Aqoxy5G03006 Aquilegia oxysepala HOM05D005263 ORTHO05D006891 1.8e-48 196.4 116 84.5
Ca_08228_v3 Cicer arietinum L. HOM05D005263 ORTHO05D006891 1.8e-48 196.4 116 83.6
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 1.8e-48 196.4 116 84.5
Potri.002G237400 Populus trichocarpa HOM05D005263 ORTHO05D006891 1.8e-48 196.4 116 84.5
Sc07g0003930 Simmondsia chinensis HOM05D005263 ORTHO05D006891 1.8e-48 196.4 116 85.3
Thecc.04G050600 Theobroma cacao HOM05D005263 ORTHO05D006891 1.8e-48 196.4 116 84.5
AL3G10030 Arabidopsis lyrata HOM05D005263 ORTHO05D006891 2.4e-48 196.1 116 83.6
AT3G02060 Arabidopsis thaliana HOM05D005263 ORTHO05D006891 2.4e-48 196.1 116 83.6
Carub.0003s0003 Capsella rubella HOM05D005263 ORTHO05D006891 2.4e-48 196.1 116 83.6
Phvul.001G099500 Phaseolus vulgaris HOM05D005263 ORTHO05D006891 2.4e-48 196.1 117 84.6
Gohir.A09G000300 Gossypium hirsutum HOM05D005263 ORTHO05D006891 3.1e-48 195.7 116 83.6
Nitab4.5_0000519g0290 Nicotiana tabacum HOM05D005263 ORTHO05D006891 3.1e-48 195.7 112 86.6
HPP92_009765 Vanilla planifolia HOM05D005263 ORTHO05D006891 3.1e-48 195.7 128 79.7
CAN.G473.163 Capsicum annuum HOM05D005263 ORTHO05D006891 4.0e-48 195.3 116 84.5
Thhalv10020076m.g Eutrema salsugineum HOM05D005263 ORTHO05D006891 4.0e-48 195.3 116 83.6
TPR.G26435 Trifolium pratense HOM05D005263 ORTHO05D006891 4.0e-48 195.3 116 84.5
Duzib147G0290 Durio zibethinus HOM05D005263 ORTHO05D006891 6.9e-48 194.5 113 86.7
Sed0001423 Sechium edule HOM05D005263 ORTHO05D006891 6.9e-48 194.5 116 83.6
Aa31LG5G11240 Aethionema arabicum HOM05D005263 ORTHO05D006891 9.0e-48 194.1 116 83.6
BcaNung05595 Brassica carinata HOM05D005263 ORTHO05D006891 9.0e-48 194.1 116 82.8
BcaNung05596 Brassica carinata HOM05D005263 ORTHO05D006891 1.2e-47 193.7 116 82.8
TAR622G0136 Trochodendron aralioides HOM05D005263 ORTHO05D006891 1.2e-47 193.7 116 84.5
ATR0582G042 Amborella trichopoda HOM05D005263 ORTHO05D006891 1.5e-47 193.4 116 85.3
Glyma.19G106000 Glycine max HOM05D005263 ORTHO05D006891 1.5e-47 193.4 117 82.9
Lalb_Chr14g0363581 Lupinus albus HOM05D005263 ORTHO05D006891 2.0e-47 193.0 116 82.8
Psat3g091960 Pisum sativum HOM05D005263 ORTHO05D006891 2.0e-47 193.0 116 82.8
Sp3g00030 Schrenkiella parvula HOM05D005263 ORTHO05D006891 2.0e-47 193.0 116 81.9
THA.LOC104821142 Tarenaya hassleriana HOM05D005263 ORTHO05D006891 2.0e-47 193.0 116 83.6
Ciclev10017439m.g Citrus clementina HOM05D005263 ORTHO05D006891 2.6e-47 192.6 116 82.8
Nn4g22084 Nelumbo nucifera HOM05D005263 ORTHO05D006891 5.8e-47 191.4 116 84.5
vmacro22255 Vaccinium macrocarpon HOM05D005263 ORTHO05D006891 4.9e-46 188.3 112 83.9
unitig_52.g17690 Utricularia gibba HOM05D005263 ORTHO05D006891 1.9e-45 186.4 114 83.3
HanXRQChr14g0451541 Helianthus annuus HOM05D005263 ORTHO05D006891 3.2e-45 185.7 117 77.8
Peaxi162Scf00420g00940 Petunia axillaris HOM05D005263 ORTHO05D006891 3.2e-45 185.7 145 69.7
Lsat_1_v5_gn_2_95241 Lactuca sativa HOM05D005263 ORTHO05D006891 1.6e-44 183.3 129 72.9
ECA238G3309 Erigeron canadensis HOM05D005263 ORTHO05D006891 3.5e-44 182.2 117 77.8
BcaC01g05768 Brassica carinata HOM05D005263 ORTHO05D006891 4.6e-44 181.8 116 77.6
Zm00001eb113530 Zea mays HOM05D005263 ORTHO05D006891 1.4e-40 170.2 116 68.1
CDE02G2322 Ceratophyllum demersum HOM05D005263 ORTHO05D006891 1.2e-39 167.2 116 76.7
HPP92_009750 Vanilla planifolia HOM05D005263 ORTHO05D006891 1.5e-39 166.8 128 71.1
CSS0005310 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 1.3e-38 163.7 93 89.2
Mapoly0015s0011 Marchantia polymorpha HOM05D005263 ORTHO05D006891 8.4e-38 161.0 116 64.7
AagrBONN_evm.TU.Sc2ySwM_117.63 Anthoceros agrestis HOM05D005263 ORTHO05D006891 4.3e-34 148.7 116 63.8
SMO364G0436 Selaginella moellendorffii HOM05D005263 ORTHO05D006891 6.9e-32 141.4 117 60.7
SEGI_39668 Sequoiadendron giganteum HOM05D005263 ORTHO05D006891 2.0e-31 139.8 92 77.2
MCO01G164 Micromonas commoda HOM05D005263 ORTHO05D006891 2.7e-28 129.4 117 55.6
CBR_g56393 Chara braunii HOM05D000409 ORTHO05D000184 2.3e-27 126.3 93 66.7
Pp3c2_18110 Physcomitrium patens HOM05D005263 ORTHO05D006891 1.5e-26 123.6 112 57.1
Hund12662 Selenicereus undatus HOM05D005263 ORTHO05D006891 3.2e-21 105.9 59 88.1
QL02p068621 Quercus lobata HOM05D005263 ORTHO05D006891 3.6e-20 102.4 74 67.6
Hund03783 Selenicereus undatus HOM05D005263 ORTHO05D006891 3.3e-18 95.9 56 85.7
Hund08319 Selenicereus undatus HOM05D001382 ORTHO05D018141 1.1e-16 90.9 79 63.3
Hund08767 Selenicereus undatus HOM05D005263 ORTHO05D006891 1.2e-15 87.4 95 56.8
Hund17870 Selenicereus undatus HOM05D001382 ORTHO05D001266 7.7e-15 84.7 57 77.2
Gorai.012G144700 Gossypium raimondii HOM05D005263 ORTHO05D013538 1.6e-12 77.0 41 95.1
CSS0000320 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 1.0e-11 74.3 47 78.7
CSS0004230 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 1.0e-11 74.3 47 78.7
Gohir.D04G157300 Gossypium hirsutum HOM05D005263 ORTHO05D013538 1.8e-11 73.6 74 62.2
BolC9t52937H Brassica oleracea HOM05D005263 ORTHO05D006891 2.2e-09 66.6 42 73.8
ATR0598G134 Amborella trichopoda HOM05D005236 ORTHO05D006557 9.1e-08 61.2 162 31.5
Hund23148 Selenicereus undatus HOM05D005263 ORTHO05D006891 9.1e-08 61.2 72 56.9
Aa31LG2G8500 Aethionema arabicum HOM05D005236 ORTHO05D006557 1.2e-07 60.8 115 31.3
Hund15255 Selenicereus undatus HOM05D001382 ORTHO05D018141 1.6e-07 60.5 54 63.0
CsaV3_5G013670 Cucumis sativus L. HOM05D005236 ORTHO05D006557 2.0e-07 60.1 152 30.3
Hund25922 Selenicereus undatus HOM05D005263 ORTHO05D006891 2.0e-07 60.1 33 93.9
Hund01555 Selenicereus undatus HOM05D002432 ORTHO05D000695 3.5e-07 59.3 35 85.7
MELO3C018322.2 Cucumis melo HOM05D005236 ORTHO05D006557 4.5e-07 58.9 152 30.3
BcaC06g34177 Brassica carinata HOM05D005236 ORTHO05D006557 5.9e-07 58.5 152 28.3
C07p31870 Brassica napus HOM05D005236 ORTHO05D006557 5.9e-07 58.5 152 28.3
BolC7t43733H Brassica oleracea HOM05D005236 ORTHO05D006557 5.9e-07 58.5 152 28.3
Eucgr.G02185 Eucalyptus grandis HOM05D005236 ORTHO05D006557 5.9e-07 58.5 107 32.7
Potri.010G112500 Populus trichocarpa HOM05D005236 ORTHO05D006557 5.9e-07 58.5 152 30.3
Hund24764 Selenicereus undatus HOM05D001382 ORTHO05D001266 5.9e-07 58.5 32 93.8
Sc14g0007110 Simmondsia chinensis HOM05D005236 ORTHO05D006557 5.9e-07 58.5 107 36.4
TWI79G0143 Tripterygium wilfordii HOM05D005236 ORTHO05D006557 5.9e-07 58.5 107 35.5
Oeu003384.3 Olea europaea HOM05D005236 ORTHO05D006557 7.7e-07 58.2 107 34.6
A06p44440 Brassica napus HOM05D005236 ORTHO05D006557 1.3e-06 57.4 152 27.6
BraA06t27318Z Brassica rapa HOM05D005236 ORTHO05D006557 1.3e-06 57.4 152 27.6
Sp2g12880 Schrenkiella parvula HOM05D005236 ORTHO05D006557 1.3e-06 57.4 152 28.3
Sed0013091 Sechium edule HOM05D005236 ORTHO05D006557 1.3e-06 57.4 107 33.6
Thecc.02G282100 Theobroma cacao HOM05D005236 ORTHO05D006557 1.3e-06 57.4 107 32.7
Ah.03g137280 Amaranthus hybridus HOM05D005236 ORTHO05D006557 1.7e-06 57.0 107 33.6
Ciclev10017747m.g Citrus clementina HOM05D005236 ORTHO05D006557 1.7e-06 57.0 107 33.6
SGA_v2.0_scaffold50G18498 Striga asiatica HOM05D005236 ORTHO05D006557 1.7e-06 57.0 107 31.8
BcaC06g31307 Brassica carinata HOM05D005236 ORTHO05D006557 2.2e-06 56.6 115 29.6
Carub.0005s0040 Capsella rubella HOM05D005236 ORTHO05D006557 2.2e-06 56.6 152 28.9
Dinv05178 Davidia involucrata HOM05D005236 ORTHO05D006557 2.9e-06 56.2 107 32.7
Dinv14429 Davidia involucrata HOM05D005236 ORTHO05D006557 2.9e-06 56.2 107 32.7
Thhalv10000760m.g Eutrema salsugineum HOM05D005236 ORTHO05D006557 2.9e-06 56.2 152 28.3
Lsat_1_v5_gn_3_54941 Lactuca sativa HOM05D005236 ORTHO05D006557 2.9e-06 56.2 107 32.7
AUR62038508 Chenopodium quinoa HOM05D005236 ORTHO05D006557 5.0e-06 55.5 134 29.1
ECA246G1132 Erigeron canadensis HOM05D005236 ORTHO05D006557 5.0e-06 55.5 107 32.7
Lj3C872G3 Lonicera japonica HOM05D005236 ORTHO05D006557 5.0e-06 55.5 107 34.6
TPR.G36938 Trifolium pratense HOM05D005236 ORTHO05D006557 5.0e-06 55.5 107 32.7
AL5G10420 Arabidopsis lyrata HOM05D005236 ORTHO05D006557 6.5e-06 55.1 152 27.0
AT2G01440 Arabidopsis thaliana HOM05D005236 ORTHO05D006557 6.5e-06 55.1 152 27.0
Cc11_g08660 Coffea canephora HOM05D005236 ORTHO05D006557 6.5e-06 55.1 115 33.0
Pp3c19_21980 Physcomitrium patens HOM05D005236 ORTHO05D006557 8.5e-06 54.7 108 36.1


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