Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g07720 Coffea canephora HOM05D000251 ORTHO05D007889 0.0e+00 1651.0 852 100.0
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 0.0e+00 1119.0 857 68.1
Nitab4.5_0000646g0050 Nicotiana tabacum HOM05D000251 ORTHO05D007889 0.0e+00 1109.4 842 67.6
CSS0040641 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D007889 0.0e+00 1088.2 850 66.4
Nitab4.5_0004342g0020 Nicotiana tabacum HOM05D000251 ORTHO05D007889 0.0e+00 1088.2 850 67.4
Lj9C433G11 Lonicera japonica HOM05D000251 ORTHO05D007889 0.0e+00 1080.9 816 68.1
Actinidia31039 Actinidia chinensis HOM05D000251 ORTHO05D007889 1.7e-311 1072.4 836 68.3
Peaxi162Scf00017g03036 Petunia axillaris HOM05D000251 ORTHO05D007889 2.9e-311 1071.6 840 67.1
Rhsim08G0149100 Rhododendron simsii HOM05D000251 ORTHO05D007889 1.1e-308 1063.1 826 66.9
TAR622G0769 Trochodendron aralioides HOM05D000251 ORTHO05D007889 1.5e-305 1052.7 849 64.8
QL10p022316 Quercus lobata HOM05D000251 ORTHO05D007889 7.3e-305 1050.4 841 65.0
Sopen03g033510 Solanum pennellii HOM05D000251 ORTHO05D007889 4.4e-302 1041.2 809 67.2
Solyc03g114410.3 Solanum lycopersicum HOM05D000251 ORTHO05D007889 9.8e-302 1040.0 838 65.4
Cfa019845 Carpinus fangiana HOM05D000251 ORTHO05D007889 1.3e-301 1039.6 844 63.9
CAN.G781.3 Capsicum annuum HOM05D000251 ORTHO05D007889 1.7e-301 1039.3 838 65.5
CiPaw.15G123200 Carya illinoinensis HOM05D000251 ORTHO05D007889 1.7e-301 1039.3 833 65.1
Nn4g23656 Nelumbo nucifera HOM05D000251 ORTHO05D007889 6.4e-301 1037.3 814 66.7
Duzib205G0552 Durio zibethinus HOM05D000251 ORTHO05D007889 7.1e-300 1033.9 818 66.7
Thecc.03G114900 Theobroma cacao HOM05D000251 ORTHO05D007889 6.6e-298 1027.3 842 64.6
GSVIVG01008206001 Vitis vinifera HOM05D000251 ORTHO05D007889 6.6e-298 1027.3 852 64.1
COL.COLO4_32187 Corchorus olitorius HOM05D000251 ORTHO05D007889 2.5e-297 1025.4 806 66.9
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 3.3e-297 1025.0 804 65.5
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 4.9e-293 1011.1 816 64.3
RcHm_v2.0_Chr7g0184311 Rosa chinensis HOM05D000251 ORTHO05D007889 6.4e-293 1010.7 814 64.6
Ciclev10018692m.g Citrus clementina HOM05D000251 ORTHO05D007889 1.4e-292 1009.6 815 64.5
Atru.chr9.705 Acer truncatum HOM05D000251 ORTHO05D007889 1.9e-292 1009.2 816 64.5
MD14G1219700 Malus domestica HOM05D000251 ORTHO05D007889 9.2e-292 1006.9 835 63.7
Potri.012G058100 Populus trichocarpa HOM05D000251 ORTHO05D007889 1.6e-291 1006.1 806 66.1
MD06G1209200 Malus domestica HOM05D000251 ORTHO05D007889 2.7e-291 1005.4 805 65.6
DCAR_015126 Daucus carota HOM05D000251 ORTHO05D007889 3.0e-290 1001.9 831 65.7
TWI81G0067 Tripterygium wilfordii HOM05D000251 ORTHO05D007889 5.1e-290 1001.1 815 64.7
HanXRQChr05g0157761 Helianthus annuus HOM05D000251 ORTHO05D007889 8.6e-290 1000.3 805 66.0
FAN18G2230 Fragaria x ananassa HOM05D000251 ORTHO05D007889 3.3e-289 998.4 834 62.4
CsaV3_1G003490 Cucumis sativus L. HOM05D000251 ORTHO05D007889 7.3e-289 997.3 823 64.9
Gohir.D03G100900 Gossypium hirsutum HOM05D000251 ORTHO05D007889 1.1e-287 993.4 819 64.0
Gorai.003G106300 Gossypium raimondii HOM05D000251 ORTHO05D007889 1.1e-287 993.4 839 63.2
Sabra12G0041800 Salix brachista HOM05D000251 ORTHO05D007889 1.4e-287 993.0 879 61.5
FvH4_5g12911 Fragaria vesca HOM05D000251 ORTHO05D007889 5.2e-287 991.1 834 62.4
Gohir.A03G074400 Gossypium hirsutum HOM05D000251 ORTHO05D007889 5.2e-287 991.1 841 63.1
VMungo1215G2774 Vigna mungo HOM05D000251 ORTHO05D007889 7.6e-286 987.3 818 63.0
Sed0011411 Sechium edule HOM05D000251 ORTHO05D007889 9.9e-286 986.9 823 64.0
arahy.Tifrunner.gnm1.ann1.ESZ5GR Arachis hypogaea HOM05D000251 ORTHO05D007889 2.2e-285 985.7 819 63.1
SGA_v2.0_scaffold283G46981 Striga asiatica HOM05D000251 ORTHO05D007889 2.2e-285 985.7 831 64.6
Lsat_1_v5_gn_5_24161 Lactuca sativa HOM05D000251 ORTHO05D007889 2.9e-285 985.3 813 64.9
arahy.Tifrunner.gnm1.ann1.MAJ7P0 Arachis hypogaea HOM05D000251 ORTHO05D007889 9.3e-284 980.3 826 62.8
Aqoxy3G00409 Aquilegia oxysepala HOM05D000251 ORTHO05D007889 2.1e-283 979.2 840 62.5
FAN13G2548 Fragaria x ananassa HOM05D000251 ORTHO05D000414 2.7e-283 978.8 818 62.7
Glyma.17G123700 Glycine max HOM05D000251 ORTHO05D007889 2.7e-283 978.8 819 61.9
PGR044G2008 Punica granatum HOM05D000251 ORTHO05D007889 5.6e-281 971.1 817 63.5
Glyma.05G015200 Glycine max HOM05D000251 ORTHO05D007889 3.6e-280 968.4 835 61.0
Lalb_Chr12g0197521 Lupinus albus HOM05D000251 ORTHO05D007889 1.8e-279 966.1 817 61.9
Psat4g045640 Pisum sativum HOM05D000251 ORTHO05D007889 2.4e-279 965.7 816 61.9
Migut.G01282 Erythranthe guttata HOM05D000251 ORTHO05D007889 1.7e-277 959.5 828 62.1
ECA246G2449 Erigeron canadensis HOM05D000251 ORTHO05D007889 3.8e-277 958.4 803 64.5
Medtr4g112420 Medicago truncatula HOM05D000251 ORTHO05D007889 3.8e-277 958.4 816 61.9
Lj4g0022759 Lotus japonicus HOM05D000251 ORTHO05D007889 1.9e-276 956.1 816 61.2
Ca_02522_v3 Cicer arietinum L. HOM05D000251 ORTHO05D007889 7.1e-276 954.1 839 61.0
Haze_18572 Corylus avellana HOM05D000251 ORTHO05D007889 7.9e-275 950.7 842 60.0
FAN18G3790 Fragaria x ananassa HOM05D000251 ORTHO05D007889 1.3e-274 949.9 918 56.6
vmacro17646 Vaccinium macrocarpon HOM05D000251 ORTHO05D007889 7.4e-273 944.1 934 56.1
TPR.G2793 Trifolium pratense HOM05D000251 ORTHO05D007889 1.6e-272 943.0 818 61.4
Eucgr.K02644 Eucalyptus grandis HOM05D000251 ORTHO05D007889 6.9e-271 937.6 819 63.2
ClCG06G015150 Citrullus lanatus HOM05D000251 ORTHO05D007889 2.6e-270 935.6 844 60.7
Manes.05G117300 Manihot esculenta HOM05D000251 ORTHO05D007889 3.4e-270 935.3 743 66.8
EL10Ac5g11229 Beta vulgaris HOM05D000251 ORTHO05D007889 3.8e-269 931.8 815 60.5
MELO3C017274.2 Cucumis melo HOM05D000251 ORTHO05D007889 1.4e-268 929.9 851 60.6
AL6G34270 Arabidopsis lyrata HOM05D000251 ORTHO05D007889 3.2e-268 928.7 803 62.9
Carub.0006s2087 Capsella rubella HOM05D000251 ORTHO05D007889 4.2e-268 928.3 803 62.1
Sp2g24040 Schrenkiella parvula HOM05D000251 ORTHO05D007889 4.2e-268 928.3 832 61.3
Hund02531 Selenicereus undatus HOM05D000251 ORTHO05D007889 2.3e-266 922.5 826 60.5
AT5G23080 Arabidopsis thaliana HOM05D000251 ORTHO05D007889 5.1e-266 921.4 796 63.2
THA.LOC104819385 Tarenaya hassleriana HOM05D000251 ORTHO05D007889 2.8e-264 915.6 806 62.9
Aa31LG11G2570 Aethionema arabicum HOM05D000251 ORTHO05D007889 9.0e-263 910.6 804 62.2
A03p46430 Brassica napus HOM05D000251 ORTHO05D007889 4.5e-262 908.3 814 60.3
BraA03t13769Z Brassica rapa HOM05D000251 ORTHO05D007889 4.5e-262 908.3 814 60.2
Thhalv10003608m.g Eutrema salsugineum HOM05D000251 ORTHO05D007889 4.5e-262 908.3 804 61.7
BcaC04g23479 Brassica carinata HOM05D000251 ORTHO05D007889 4.9e-261 904.8 814 60.8
BolC9t53705H Brassica oleracea HOM05D000251 ORTHO05D007889 4.9e-261 904.8 814 60.8
A09p07070 Brassica napus HOM05D000251 ORTHO05D007889 1.4e-260 903.3 841 59.6
C07p44450 Brassica napus HOM05D000251 ORTHO05D007889 5.5e-260 901.4 818 60.0
BolC7t44966H Brassica oleracea HOM05D000251 ORTHO05D007889 2.1e-259 899.4 818 59.9
BraA09t36355Z Brassica rapa HOM05D000251 ORTHO05D007889 3.5e-259 898.7 834 60.1
AUR62036928 Chenopodium quinoa HOM05D000251 ORTHO05D007889 4.6e-259 898.3 842 58.0
Rhsim08G0139200 Rhododendron simsii HOM05D000251 ORTHO05D007889 5.1e-258 894.8 694 66.9
C09p07920 Brassica napus HOM05D000251 ORTHO05D007889 9.6e-257 890.6 814 60.3
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 2.6e-254 882.5 741 62.5
PSO017G5760 Papaver somniferum HOM05D000251 ORTHO05D007889 1.3e-253 880.2 816 58.8
PSO478G4362 Papaver somniferum HOM05D000251 ORTHO05D007889 3.5e-251 872.1 823 58.0
BcaB04g19889 Brassica carinata HOM05D000251 ORTHO05D007889 7.4e-249 864.4 816 60.2
Cpa.g.sc13.78 Carica papaya HOM05D000251 ORTHO05D007889 4.5e-246 855.1 742 61.5
SalBow2G1753 Salvia bowleyana HOM05D000251 ORTHO05D007889 6.7e-242 841.3 829 57.1
CDE08G0099 Ceratophyllum demersum HOM05D000251 ORTHO05D007889 3.7e-240 835.5 798 56.5
AUR62032169 Chenopodium quinoa HOM05D000251 ORTHO05D007889 5.3e-239 831.6 832 55.5
Phvul.003G179400 Phaseolus vulgaris HOM05D000251 ORTHO05D007889 7.7e-238 827.8 720 59.9
unitig_736.g22471 Utricularia gibba HOM05D000251 ORTHO05D007889 5.0e-237 825.1 822 56.1
ATR0723G093 Amborella trichopoda HOM05D000251 ORTHO05D007889 1.4e-234 817.0 850 54.7
Os06g0489200 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D007889 3.8e-221 772.3 823 52.7
Ah.02g114420 Amaranthus hybridus HOM05D000251 ORTHO05D007889 4.7e-211 738.8 728 55.4
AagrBONN_evm.TU.Sc2ySwM_344.5190 Anthoceros agrestis HOM05D000251 ORTHO05D007889 2.9e-176 623.2 885 44.7
Nn039s41709 Nelumbo nucifera HOM05D000251 ORTHO05D007889 5.4e-175 619.0 506 63.6
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 9.6e-164 581.6 877 43.2
SMO358G0348 Selaginella moellendorffii HOM05D000251 ORTHO05D007889 4.8e-155 552.7 838 43.4
HPP92_003115 Vanilla planifolia HOM05D000251 ORTHO05D007889 8.4e-144 515.4 664 48.3
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 2.7e-142 510.4 845 40.1
CARHR190450 Cardamine hirsuta HOM05D000251 ORTHO05D007889 5.1e-141 506.1 524 55.2
Hma1.2p1_0595F.1_g186110 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 7.2e-127 459.1 353 65.2
SEGI_18733 Sequoiadendron giganteum HOM05D000251 ORTHO05D007889 1.4e-122 444.9 440 54.3
Zm00001eb382170 Zea mays HOM05D000251 ORTHO05D007889 1.1e-95 355.5 452 46.2
CBR_g57132 Chara braunii HOM05D000251 ORTHO05D007889 2.8e-94 350.9 1013 31.3
Hma1.2p1_0595F.1_g186100 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 8.3e-91 339.3 224 77.2
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 6.0e-65 253.4 729 30.9
Actinidia16061 Actinidia chinensis HOM05D000251 ORTHO05D007889 1.8e-53 215.3 196 61.7
Cre13.g568700 Chlamydomonas reinhardtii HOM05D000251 ORTHO05D007889 3.1e-45 188.0 349 38.4
Ah.02g114430 Amaranthus hybridus HOM05D000169 ORTHO05D000542 2.9e-43 181.4 107 84.1
SHI18972 Sapria himalayana HOM05D000251 ORTHO05D007889 4.6e-41 174.1 106 79.2
Psat4g067080 Pisum sativum HOM05D000251 ORTHO05D007889 2.1e-38 165.2 233 41.6
BcaC06g33188 Brassica carinata HOM05D000251 ORTHO05D007889 3.7e-38 164.5 282 42.9
Actinidia16060 Actinidia chinensis HOM05D000251 ORTHO05D007889 6.0e-33 147.1 170 47.1
CiPaw.15G123400 Carya illinoinensis HOM05D000251 ORTHO05D007889 3.4e-28 131.3 94 70.2
Cfa026338 Carpinus fangiana HOM05D000251 ORTHO05D007889 1.1e-23 116.3 718 26.0
Rhsim08G0139300 Rhododendron simsii HOM05D000251 ORTHO05D007889 1.3e-22 112.8 180 42.8
GSVIVG01008210001 Vitis vinifera HOM05D000251 ORTHO05D007889 1.3e-19 102.8 73 71.2
Hma1.2p1_0690F.1_g203840 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 5.3e-13 80.9 46 87.0
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 1.9e-10 72.4 101 38.6
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 1.2e-09 69.7 95 36.8
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 2.1e-09 68.9 70 44.3
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 4.7e-09 67.8 67 44.8
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 7.9e-09 67.0 89 37.1
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 7.9e-09 67.0 92 39.1
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 7.9e-09 67.0 88 39.8
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 1.0e-08 66.6 88 39.8
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 1.8e-08 65.9 92 41.3
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 2.3e-08 65.5 89 36.0
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 3.0e-08 65.1 95 35.8
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 3.9e-08 64.7 65 44.6
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 5.1e-08 64.3 89 38.2
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 8.8e-08 63.5 95 35.8
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 8.8e-08 63.5 89 37.1
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 8.8e-08 63.5 89 36.0
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 1.5e-07 62.8 98 35.7
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 1.5e-07 62.8 90 35.6
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 1.5e-07 62.8 89 37.1
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 2.0e-07 62.4 89 39.3
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 2.0e-07 62.4 60 46.7
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 2.6e-07 62.0 82 35.4
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 2.6e-07 62.0 64 43.8
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 3.3e-07 61.6 89 38.2
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 3.3e-07 61.6 89 38.2
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 3.3e-07 61.6 89 37.1
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 3.3e-07 61.6 88 36.4
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 3.3e-07 61.6 60 45.0
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 4.4e-07 61.2 60 45.0
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 5.7e-07 60.8 89 33.7
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 5.7e-07 60.8 81 35.8
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 1.7e-06 59.3 90 35.6
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 2.2e-06 58.9 65 44.6
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 2.2e-06 58.9 90 35.6
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 2.2e-06 58.9 85 37.6
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 2.2e-06 58.9 89 37.1
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 2.8e-06 58.5 68 44.1
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 2.8e-06 58.5 95 32.6
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 3.7e-06 58.2 62 45.2
Lsat_1_v5_gn_4_21520 Lactuca sativa HOM05D003221 ORTHO05D016847 3.7e-06 58.2 39 71.8
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 4.8e-06 57.8 61 45.9
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 8.2e-06 57.0 89 36.0
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 8.2e-06 57.0 89 34.8


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