Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 2.2e-194 682.2 353 100.0
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 5.6e-142 508.1 360 73.9
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 2.4e-137 492.7 360 73.6
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 4.7e-133 478.4 360 70.0
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.8e-132 476.5 360 70.8
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 5.8e-131 471.5 362 71.8
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 1.7e-130 469.9 362 69.9
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 7.1e-129 464.5 352 71.3
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 3.5e-128 462.2 353 71.1
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 6.0e-128 461.5 353 70.8
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 1.9e-126 456.4 360 67.5
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 1.2e-125 453.8 358 69.0
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 5.2e-124 448.4 360 66.9
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 5.8e-123 444.9 360 65.8
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 7.6e-123 444.5 360 66.1
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 1.7e-122 443.4 359 67.4
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 6.4e-122 441.4 349 67.3
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 3.2e-121 439.1 352 67.0
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 1.2e-120 437.2 359 66.9
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 3.5e-120 435.6 351 68.1
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 4.6e-120 435.3 359 66.9
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 1.3e-119 433.7 359 66.6
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 3.0e-119 432.6 360 65.6
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 3.9e-119 432.2 359 65.5
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 6.6e-119 431.4 369 64.8
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 6.6e-119 431.4 354 64.7
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 8.7e-119 431.0 359 65.7
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 1.1e-118 430.6 359 66.6
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 1.5e-118 430.3 361 65.9
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 2.5e-118 429.5 360 65.6
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 2.5e-118 429.5 356 65.7
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 3.3e-118 429.1 360 65.3
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 5.6e-118 428.3 360 65.6
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 9.6e-118 427.6 439 56.9
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 1.3e-117 427.2 354 64.4
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 4.8e-117 425.2 361 65.1
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 1.4e-116 423.7 455 55.4
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 2.4e-116 422.9 360 63.9
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 9.0e-116 421.0 361 64.8
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 1.5e-115 420.2 354 62.7
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 1.5e-115 420.2 324 68.8
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 3.4e-115 419.1 355 64.8
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 4.5e-115 418.7 360 63.6
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 1.7e-114 416.8 431 56.8
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 1.1e-113 414.1 363 64.2
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 1.4e-113 413.7 360 64.2
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 1.4e-113 413.7 361 62.0
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 7.1e-113 411.4 360 62.8
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 9.3e-113 411.0 336 66.7
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 4.6e-112 408.7 329 68.4
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 4.6e-112 408.7 360 62.5
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 1.8e-111 406.8 363 61.4
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 1.8e-111 406.8 362 62.7
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 1.8e-111 406.8 361 63.4
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 6.7e-111 404.8 355 63.7
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 8.7e-111 404.4 368 62.2
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 2.5e-110 402.9 359 63.8
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 3.3e-110 402.5 416 56.5
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 7.4e-110 401.4 357 63.0
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 5.3e-108 395.2 360 60.8
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 9.0e-108 394.4 368 61.4
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 2.0e-107 393.3 371 60.1
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 7.6e-107 391.3 360 62.5
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 8.4e-106 387.9 353 59.2
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 2.4e-105 386.3 354 59.6
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 1.2e-104 384.0 280 72.1
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 1.0e-103 380.9 332 62.7
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 3.9e-103 379.0 356 58.7
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 6.7e-103 378.3 350 60.0
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 1.9e-102 376.7 352 58.2
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 5.6e-102 375.2 321 61.4
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 9.6e-102 374.4 325 64.9
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 5.3e-100 368.6 306 63.7
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 8.4e-98 361.3 341 61.6
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 1.4e-97 360.5 328 62.5
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 7.1e-97 358.2 324 61.1
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 1.6e-96 357.1 330 60.0
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 2.7e-96 356.3 336 59.8
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 3.5e-96 355.9 351 55.8
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 6.0e-96 355.1 324 60.8
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 7.9e-96 354.8 322 60.6
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.0e-95 354.4 330 60.6
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 2.3e-95 353.2 322 60.2
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 8.7e-95 351.3 322 60.2
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 3.7e-93 345.9 352 58.8
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 6.9e-92 341.7 319 59.2
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 1.5e-91 340.5 319 59.2
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 2.0e-91 340.1 319 58.9
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 2.6e-91 339.7 319 59.2
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 4.5e-91 339.0 319 58.9
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.3e-90 337.4 290 63.1
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 2.5e-89 333.2 381 54.6
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 1.2e-88 330.9 333 58.0
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 5.7e-86 322.0 321 56.7
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 2.8e-85 319.7 301 58.5
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 9.1e-84 314.7 326 54.6
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 4.5e-83 312.4 353 53.0
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.7e-82 310.5 339 52.5
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 6.5e-82 308.5 330 53.0
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 6.5e-82 308.5 319 52.0
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 2.5e-81 306.6 245 67.8
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 6.7e-79 298.5 326 54.9
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 2.0e-78 297.0 295 58.0
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 3.9e-71 272.7 224 65.2
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 2.0e-70 270.4 283 56.9
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.5e-67 259.2 304 54.3
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 3.0e-63 246.5 324 45.7
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 2.8e-61 240.0 340 44.1
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.1e-60 238.0 301 47.8
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 1.2e-56 224.6 334 40.7
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 1.2e-51 208.0 186 62.4
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 3.0e-47 193.4 304 36.8
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 7.5e-46 188.7 316 39.6
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 3.0e-34 150.2 337 36.2
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 6.6e-34 149.1 122 65.6
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 2.7e-27 127.1 111 63.1
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 8.6e-18 95.5 133 44.4
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.5e-17 94.7 96 56.2
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 1.0e-10 72.0 90 46.7
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 8.7e-10 68.9 74 45.9


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