Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 6.6e-131 470.7 236 100.0
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 3.3e-66 255.8 210 65.7
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 7.0e-64 248.1 199 69.3
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 1.5e-63 246.9 197 68.0
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 5.0e-62 241.9 226 61.5
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 2.5e-61 239.6 214 64.5
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 9.4e-61 237.7 203 62.6
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 1.2e-60 237.3 210 65.7
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 8.0e-60 234.6 212 61.3
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 1.4e-59 233.8 215 61.4
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 2.3e-59 233.0 219 61.6
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 4.0e-59 232.3 222 59.5
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.0e-58 229.9 217 60.4
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 7.5e-58 228.0 214 60.3
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 1.7e-57 226.9 199 61.3
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 4.8e-57 225.3 210 61.9
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 7.0e-56 221.5 225 57.8
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.6e-55 220.3 206 64.6
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 2.0e-55 219.9 210 63.3
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 2.0e-55 219.9 204 61.3
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 2.6e-55 219.5 204 60.8
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 2.6e-55 219.5 219 58.9
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 5.9e-55 218.4 201 62.7
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 5.9e-55 218.4 195 62.6
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 7.7e-55 218.0 205 61.5
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 7.7e-55 218.0 213 59.6
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 6.5e-54 214.9 215 58.1
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 1.9e-53 213.4 208 61.5
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 5.5e-53 211.8 216 56.9
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 2.7e-52 209.5 234 54.3
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 2.7e-52 209.5 214 56.5
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 3.6e-52 209.1 209 59.3
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 3.6e-52 209.1 209 57.4
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 4.7e-52 208.8 200 62.0
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 1.0e-51 207.6 211 57.3
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 1.4e-51 207.2 216 57.9
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 5.2e-51 205.3 204 60.3
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 1.5e-50 203.8 215 56.3
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.0e-50 203.4 207 60.9
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 7.5e-50 201.4 222 55.9
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 9.8e-50 201.1 207 60.4
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 1.3e-49 200.7 209 57.9
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 2.2e-49 199.9 215 55.8
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 2.8e-49 199.5 175 61.7
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 3.7e-49 199.1 214 57.0
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 6.3e-49 198.4 216 55.6
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.3e-49 198.4 203 60.6
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 8.3e-49 198.0 200 60.0
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.8e-48 196.8 202 60.9
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.8e-48 196.8 202 60.9
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.1e-48 196.1 203 60.6
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 4.1e-48 195.7 208 55.8
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 4.1e-48 195.7 213 56.3
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 1.2e-47 194.1 208 54.3
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 1.6e-47 193.7 211 54.0
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 1.6e-47 193.7 211 54.0
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 1.6e-47 193.7 212 55.2
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 2.0e-47 193.4 212 55.2
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 2.0e-47 193.4 212 54.7
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 3.5e-47 192.6 208 55.3
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 5.9e-47 191.8 212 54.7
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 7.7e-47 191.4 202 59.9
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 1.0e-46 191.0 214 54.2
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 1.7e-46 190.3 211 54.5
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 1.7e-46 190.3 212 54.2
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 1.7e-46 190.3 212 54.2
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 2.2e-46 189.9 221 52.5
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 2.9e-46 189.5 210 55.7
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.9e-46 189.5 202 58.4
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 5.0e-46 188.7 215 52.1
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 1.5e-45 187.2 212 53.8
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.5e-45 187.2 203 59.1
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 1.9e-45 186.8 209 53.6
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 2.5e-45 186.4 227 52.9
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.5e-45 185.3 202 56.9
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 7.2e-45 184.9 212 53.3
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 7.2e-45 184.9 208 53.4
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 1.2e-44 184.1 210 51.9
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 8.0e-44 181.4 210 53.8
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 1.4e-43 180.6 205 55.1
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 5.2e-43 178.7 206 51.5
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.7e-41 173.7 174 62.1
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 2.2e-41 173.3 259 45.2
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 2.2e-41 173.3 196 54.6
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 3.1e-40 169.5 148 62.2
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 3.8e-38 162.5 225 48.9
Hund18673 Selenicereus undatus HOM05D001849 ORTHO05D004689 3.3e-37 159.5 165 61.2
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 1.0e-35 154.5 214 45.3
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 5.2e-35 152.1 153 57.5
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 1.7e-33 147.1 122 66.4
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 8.3e-33 144.8 173 52.0
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 7.0e-32 141.7 194 47.9
TAR730G0002 Trochodendron aralioides HOM05D001849 ORTHO05D004689 5.9e-31 138.7 153 55.6
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 3.9e-30 136.0 207 44.0
Duzib235G0009 Durio zibethinus HOM05D001849 ORTHO05D004689 2.8e-28 129.8 172 49.4
Cpa.g.sc169.33 Carica papaya HOM05D001849 ORTHO05D004689 6.2e-28 128.6 169 45.6
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.8e-27 127.1 183 49.2
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 3.6e-20 102.8 63 81.0
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 2.6e-18 96.7 234 31.6
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 2.6e-18 96.7 97 45.4
Atru.chr12.2396 Acer truncatum HOM05D001849 ORTHO05D004689 9.8e-18 94.7 133 45.9
Hma1.2p1_0225F.1_g094790 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.2e-17 93.6 129 48.8
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 1.5e-13 80.9 107 44.9
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 1.6e-12 77.4 67 49.3
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 4.0e-11 72.8 85 36.5
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 1.4e-08 64.3 72 40.3
Hma1.2p1_0436F.1_g152830 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.0e-06 58.2 66 50.0
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 1.7e-06 57.4 31 80.6


User provided reference genes

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