Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 5.9e-298 1026.9 579 100.0
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 4.7e-146 522.3 545 60.7
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 1.8e-145 520.4 545 60.6
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 3.7e-143 512.7 569 56.4
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 8.3e-143 511.5 561 56.9
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 9.2e-142 508.1 524 60.1
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 2.3e-137 493.4 525 58.1
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 3.4e-136 489.6 535 55.7
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 5.9e-133 478.8 484 61.6
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 5.2e-129 465.7 478 57.3
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 4.4e-128 462.6 588 54.1
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 3.0e-124 449.9 507 52.5
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.1e-121 439.9 546 49.3
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 1.6e-117 427.6 538 49.8
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 3.3e-115 419.9 576 48.6
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 4.7e-114 416.0 538 53.5
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 1.4e-113 414.5 468 52.8
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 1.5e-112 411.0 522 50.0
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 1.7e-111 407.5 544 48.0
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 3.7e-111 406.4 620 45.2
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 1.6e-109 401.0 502 49.8
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 2.3e-108 397.1 521 49.5
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 6.6e-108 395.6 529 48.4
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 1.9e-107 394.0 584 44.5
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 4.3e-107 392.9 465 50.5
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 1.2e-106 391.3 535 47.1
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 1.4e-105 387.9 560 46.1
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 2.6e-104 383.6 451 53.7
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 1.3e-103 381.3 581 46.5
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 8.4e-103 378.6 492 50.0
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 1.1e-102 378.3 452 52.9
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 2.4e-102 377.1 481 51.4
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 7.1e-102 375.6 586 45.4
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 1.2e-101 374.8 603 44.9
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 2.1e-101 374.0 525 46.5
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 4.6e-101 372.9 539 46.8
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 2.3e-100 370.5 538 46.5
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 2.3e-100 370.5 539 48.6
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 3.9e-100 369.8 455 54.1
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 1.5e-99 367.9 583 44.8
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 3.3e-99 366.7 496 42.7
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 8.1e-98 362.1 530 45.1
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 5.3e-97 359.4 492 48.2
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 9.0e-97 358.6 507 47.5
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 5.8e-96 355.9 518 44.0
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 5.8e-96 355.9 527 48.4
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 1.3e-95 354.8 550 46.4
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 3.8e-95 353.2 527 45.7
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 6.4e-95 352.4 578 45.5
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 8.4e-95 352.1 506 47.6
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 8.4e-95 352.1 502 49.4
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 2.4e-94 350.5 580 42.6
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 3.2e-94 350.1 544 46.5
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 3.2e-94 350.1 564 42.9
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 7.1e-94 349.0 502 49.2
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 1.2e-93 348.2 540 46.5
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 1.7e-92 344.4 489 47.9
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 8.7e-92 342.0 502 48.8
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 3.3e-91 340.1 476 47.5
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 1.3e-90 338.2 473 47.1
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 1.6e-90 337.8 422 51.7
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 6.2e-90 335.9 467 43.3
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 2.4e-89 334.0 518 45.2
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 3.4e-88 330.1 467 46.9
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 7.6e-88 328.9 477 48.2
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 1.3e-87 328.2 524 44.1
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 3.8e-87 326.6 504 47.6
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 4.9e-87 326.2 452 45.6
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 3.2e-86 323.6 527 43.5
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 3.2e-86 323.6 389 50.1
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 1.3e-84 318.2 524 45.0
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 3.0e-84 317.0 522 43.9
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 3.9e-84 316.6 533 45.0
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 8.7e-84 315.5 520 45.0
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 3.3e-83 313.5 570 44.2
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 5.6e-83 312.8 536 42.2
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 7.4e-83 312.4 585 40.7
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 2.1e-82 310.8 573 39.1
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 3.7e-82 310.1 476 45.6
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 1.8e-81 307.8 463 39.7
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 1.8e-81 307.8 230 67.8
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 4.9e-79 299.7 469 42.0
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 6.5e-79 299.3 541 39.7
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 3.2e-78 297.0 578 41.2
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 6.0e-77 292.7 572 38.5
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 1.3e-76 291.6 572 37.9
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 2.5e-75 287.3 533 39.2
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 3.3e-75 287.0 572 37.2
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 4.3e-75 286.6 532 38.3
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 9.6e-75 285.4 580 37.6
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 3.1e-73 280.4 534 41.8
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 2.0e-72 277.7 542 39.1
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 1.3e-71 275.0 567 40.4
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 5.0e-71 273.1 300 57.7
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 6.5e-71 272.7 469 40.1
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 1.1e-70 271.9 522 37.4
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 4.2e-70 270.0 208 73.1
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 6.1e-69 266.2 481 40.3
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 7.9e-69 265.8 463 39.7
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 1.5e-67 261.5 463 39.3
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 2.5e-67 260.8 459 40.1
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 4.8e-66 256.5 503 37.0
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 4.2e-62 243.4 434 42.6
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 7.2e-62 242.7 400 45.8
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 8.8e-60 235.7 354 44.4
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 1.1e-49 202.2 313 46.3
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 4.2e-46 190.3 202 60.4
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 2.7e-45 187.6 454 30.6
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 2.8e-42 177.6 359 37.3
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.6e-37 160.6 164 48.2
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 4.0e-36 157.1 114 68.4
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.6e-32 145.2 347 30.0
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 1.0e-31 142.5 129 55.0
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.2e-27 129.0 96 62.5
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 2.0e-27 128.3 82 75.6
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 3.4e-27 127.5 362 26.2
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 1.5e-22 112.1 154 38.3
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 6.1e-21 106.7 120 60.8
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 6.8e-20 103.2 315 33.0
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 3.4e-19 100.9 157 40.8
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 2.2e-18 98.2 85 58.8
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 1.6e-16 92.0 156 34.6
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 1.7e-15 88.6 123 47.2
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 2.1e-13 81.6 144 38.2
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 3.6e-13 80.9 62 62.9
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 1.1e-12 79.3 146 34.2
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 1.4e-12 79.0 81 53.1
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 2.3e-12 78.2 58 63.8
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 5.4e-09 67.0 146 30.8
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 5.4e-09 67.0 52 59.6
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 2.0e-08 65.1 148 27.0
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 3.0e-07 61.2 54 51.9


User provided reference genes

Program Settings