Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 2.6e-247 858.2 425 100.0
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 4.4e-210 734.6 423 85.3
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 1.7e-209 732.6 420 84.0
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 2.2e-209 732.3 425 84.9
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.9e-208 729.2 420 83.6
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 2.4e-208 728.8 428 84.8
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 1.2e-207 726.5 397 86.9
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 3.5e-207 724.9 397 86.6
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 4.6e-207 724.5 420 86.2
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 1.0e-206 723.4 391 86.7
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 5.0e-206 721.1 415 82.9
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 1.9e-205 719.2 418 85.9
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 4.3e-205 718.0 420 85.2
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 4.7e-204 714.5 425 83.3
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 8.1e-204 713.8 418 83.0
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 8.9e-203 710.3 394 84.8
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 8.9e-203 710.3 424 83.0
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 4.4e-202 708.0 396 84.1
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 6.4e-201 704.1 420 80.7
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 1.6e-199 699.5 423 79.4
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 2.1e-199 699.1 443 78.3
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 6.6e-198 694.1 423 80.9
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.5e-197 693.0 427 78.7
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 1.5e-197 693.0 431 78.4
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 9.5e-197 690.3 411 82.5
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 6.2e-196 687.6 387 83.5
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 1.4e-195 686.4 419 80.9
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 1.2e-194 683.3 398 81.7
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 7.6e-194 680.6 391 82.6
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.3e-193 679.9 414 79.2
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 2.9e-193 678.7 411 82.7
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 6.4e-193 677.6 393 81.7
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 8.4e-193 677.2 422 78.2
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 8.4e-193 677.2 424 78.3
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.9e-192 676.0 411 79.1
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 3.2e-192 675.2 411 78.8
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 7.1e-192 674.1 411 78.6
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 9.2e-192 673.7 422 78.2
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 9.2e-192 673.7 418 77.8
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 1.2e-191 673.3 426 79.3
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 2.7e-191 672.2 424 77.4
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 2.7e-191 672.2 402 79.6
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 3.5e-191 671.8 421 77.4
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 6.0e-191 671.0 416 78.1
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 6.0e-191 671.0 424 76.7
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 7.8e-191 670.6 419 76.8
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 1.7e-190 669.5 421 77.9
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 3.0e-190 668.7 413 78.2
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 6.6e-190 667.5 411 78.6
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 1.1e-189 666.8 382 82.2
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.1e-189 666.8 413 78.0
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 1.1e-189 666.8 413 78.0
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 1.9e-189 666.0 398 78.4
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 2.5e-189 665.6 419 75.7
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 7.3e-189 664.1 417 78.4
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 9.6e-189 663.7 425 78.1
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 2.1e-188 662.5 413 76.3
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 4.7e-188 661.4 394 78.2
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 4.7e-188 661.4 434 73.7
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.4e-187 659.8 400 78.2
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 1.8e-187 659.4 396 78.5
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 1.8e-187 659.4 396 78.5
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 4.0e-187 658.3 400 78.2
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 5.2e-187 657.9 399 79.2
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 9.0e-187 657.1 396 76.3
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 1.2e-186 656.8 399 77.4
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 1.2e-186 656.8 396 78.3
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 2.0e-186 656.0 403 78.9
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 3.4e-186 655.2 390 80.0
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 4.4e-186 654.8 397 76.6
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 4.4e-186 654.8 390 80.0
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 1.7e-185 652.9 401 77.8
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 1.7e-185 652.9 376 86.4
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 6.4e-185 651.0 348 89.7
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 6.4e-185 651.0 396 75.5
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 1.1e-184 650.2 397 75.6
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 1.4e-184 649.8 422 75.6
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 1.4e-184 649.8 422 75.6
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 1.9e-184 649.4 401 77.6
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 5.4e-184 647.9 421 75.3
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 1.6e-183 646.4 421 75.1
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 1.6e-183 646.4 421 75.1
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 2.1e-183 646.0 426 74.2
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 4.6e-183 644.8 401 76.8
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 1.6e-180 636.3 401 75.8
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 3.1e-179 632.1 347 87.0
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 6.0e-175 617.8 374 81.3
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 1.6e-172 609.8 415 73.3
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 4.8e-172 608.2 395 73.7
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 3.1e-171 605.5 386 72.8
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 3.4e-170 602.1 372 79.3
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 1.7e-169 599.7 324 87.0
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 3.2e-168 595.5 348 81.9
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.6e-167 593.2 347 82.1
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 4.2e-160 568.5 408 73.3
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 5.5e-160 568.2 337 80.7
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 2.2e-156 556.2 319 80.6
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 3.7e-156 555.4 335 78.8
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 1.8e-155 553.1 320 79.1
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 2.2e-153 546.2 387 64.9
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 4.6e-151 538.5 383 64.8
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 3.3e-149 532.3 320 78.8
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 2.2e-148 529.6 283 89.0
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 4.8e-148 528.5 313 76.7
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 7.9e-143 511.1 324 73.5
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 3.9e-142 508.8 293 84.0
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 3.9e-142 508.8 385 60.0
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 1.5e-141 506.9 390 60.3
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 1.8e-126 456.8 267 78.7
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 6.8e-110 401.7 246 76.8
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 1.8e-107 393.7 246 80.9
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 1.0e-105 387.9 403 47.1
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 2.9e-105 386.3 274 62.0
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 6.0e-98 362.1 283 65.4
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 8.0e-95 351.7 402 45.5
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 6.4e-92 342.0 182 90.1
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 1.2e-82 311.2 389 42.7
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 3.8e-68 263.1 442 34.8
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 9.3e-67 258.5 324 45.4
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 8.7e-65 251.9 348 39.1
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 4.3e-32 143.3 90 70.0
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 5.0e-28 129.8 97 76.3
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 1.1e-22 112.1 74 66.2
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 5.0e-20 103.2 54 79.6
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 3.2e-19 100.5 91 63.7
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 8.2e-15 85.9 133 39.1
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 5.3e-14 83.2 89 53.9
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 1.9e-11 74.7 59 66.1
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 1.0e-09 68.9 49 63.3
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 6.3e-07 59.7 89 43.8


User provided reference genes

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