Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 0.0e+00 2164.0 1078 100.0
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 0.0e+00 2072.4 1076 94.8
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 0.0e+00 2034.6 1077 92.9
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 0.0e+00 2002.3 1041 95.0
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1989.2 1078 91.7
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 0.0e+00 1985.7 1078 90.5
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1981.5 1078 91.4
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1980.7 1078 91.4
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 0.0e+00 1969.1 1078 91.0
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1965.7 1089 90.2
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1961.0 1091 89.6
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 0.0e+00 1956.4 1116 88.1
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 0.0e+00 1939.9 1077 88.9
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 0.0e+00 1879.0 1081 85.2
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 0.0e+00 1641.7 1089 74.3
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1602.4 1080 76.8
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 0.0e+00 1598.9 1091 72.9
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 0.0e+00 1580.8 1101 72.7
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1580.8 1089 72.4
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 0.0e+00 1576.2 1095 71.4
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 0.0e+00 1576.2 1105 71.6
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1573.1 1085 72.2
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 0.0e+00 1570.8 1085 70.4
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 0.0e+00 1569.7 1092 72.2
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1569.3 1090 71.4
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 0.0e+00 1565.8 1089 72.6
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 0.0e+00 1565.8 1100 71.0
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 0.0e+00 1561.2 1092 72.1
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1545.0 1116 69.4
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 0.0e+00 1542.7 1113 69.5
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1541.9 1088 71.6
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1518.1 1098 70.0
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 0.0e+00 1514.2 981 75.6
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1502.6 1084 71.0
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 0.0e+00 1494.2 1086 70.3
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 0.0e+00 1494.2 1098 68.9
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1491.5 1085 70.0
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 0.0e+00 1485.7 1090 68.0
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 0.0e+00 1476.8 1084 67.5
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1474.5 1078 69.6
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 0.0e+00 1472.6 1092 68.0
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1460.7 1118 65.7
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 0.0e+00 1455.3 1101 67.2
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1454.5 1135 66.3
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 0.0e+00 1454.1 1134 65.3
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 0.0e+00 1453.7 1091 67.8
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 0.0e+00 1449.5 1100 66.7
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1449.1 1100 68.2
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 0.0e+00 1437.9 1116 65.3
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 0.0e+00 1435.2 1088 66.5
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 0.0e+00 1432.2 1080 66.5
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 0.0e+00 1431.0 1082 67.2
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1429.5 1097 66.9
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1428.7 1087 67.2
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 0.0e+00 1426.4 1141 63.6
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 0.0e+00 1425.6 1017 68.7
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1419.4 1084 66.3
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 0.0e+00 1413.3 1075 66.9
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1412.1 1095 65.0
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 0.0e+00 1410.6 1193 63.5
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 0.0e+00 1409.4 1121 64.0
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 0.0e+00 1407.9 1081 65.1
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 0.0e+00 1406.7 1089 65.6
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1397.9 1083 65.7
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1395.6 1085 65.2
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1391.3 1085 65.0
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 0.0e+00 1388.2 1083 64.6
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1387.9 1080 66.8
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 0.0e+00 1387.5 1092 64.3
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 0.0e+00 1380.9 1092 63.6
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 0.0e+00 1371.7 1082 65.1
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 0.0e+00 1366.7 870 76.1
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1365.1 1109 63.2
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 0.0e+00 1358.2 1082 63.8
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 0.0e+00 1358.2 1094 64.1
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 0.0e+00 1346.3 870 75.1
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 0.0e+00 1337.8 1208 57.9
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 0.0e+00 1327.8 1172 59.6
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 0.0e+00 1317.0 1083 61.5
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1306.6 1088 61.7
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 0.0e+00 1287.3 893 70.3
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 0.0e+00 1285.0 869 71.9
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 0.0e+00 1268.1 822 75.4
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 0.0e+00 1268.1 1094 60.4
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 0.0e+00 1267.7 858 71.0
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 0.0e+00 1257.3 848 71.8
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 0.0e+00 1248.0 1082 59.7
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 0.0e+00 1238.0 873 70.2
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 0.0e+00 1234.2 870 69.7
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 0.0e+00 1215.3 928 65.8
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 0.0e+00 1201.0 825 69.8
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1197.6 1012 62.7
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1196.0 1051 59.4
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 0.0e+00 1193.7 1211 54.3
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1192.6 1003 62.8
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1104.0 864 63.5
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 0.0e+00 1077.4 1060 53.9
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.6e-296 1023.1 700 71.7
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 1.2e-283 980.3 897 57.1
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 8.7e-271 937.6 496 95.4
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 5.8e-267 924.9 1100 46.5
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 1.8e-263 913.3 538 88.3
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 1.6e-261 906.7 981 49.0
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 2.5e-257 892.9 644 68.6
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 5.1e-247 858.6 598 70.1
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 9.7e-246 854.4 969 46.2
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 3.6e-232 809.3 714 59.1
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 2.2e-221 773.5 944 45.0
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 1.9e-161 574.3 472 62.9
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.3e-154 551.6 406 70.4
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 2.9e-149 533.9 1069 34.2
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 9.3e-140 502.3 397 66.0
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 4.8e-136 490.0 318 74.8
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 4.5e-118 430.3 389 56.6
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 5.6e-92 343.6 223 73.1
CSS0033574 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.2e-72 278.5 225 64.0
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 3.7e-72 277.7 290 50.7
CSS0020573 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.3e-64 252.7 233 55.8
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 1.9e-60 238.8 177 66.1
Glyma.16G010300 Glycine max HOM05D001849 ORTHO05D004689 7.3e-60 236.9 160 74.4
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 2.2e-56 225.3 215 59.1
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 9.6e-52 209.9 174 67.2
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 1.3e-51 209.5 209 55.0
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.4e-47 194.1 192 59.9
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 6.0e-46 190.7 210 55.7
HPP92_021920 Vanilla planifolia HOM05D001849 ORTHO05D004689 6.0e-46 190.7 144 65.3
SEGI_09459 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.1e-39 169.9 177 52.0
Cpa.g.sc169.33 Carica papaya HOM05D001849 ORTHO05D004689 7.1e-39 167.2 176 54.0
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 1.3e-37 162.9 163 50.9
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 1.8e-37 162.5 188 52.1
MBI18_g40032_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 1.8e-34 152.5 183 48.6
Duzib235G0009 Durio zibethinus HOM05D001849 ORTHO05D004689 1.5e-33 149.4 174 52.3
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 8.4e-32 143.7 90 77.8
Hund18673 Selenicereus undatus HOM05D001849 ORTHO05D004689 1.9e-31 142.5 176 50.6
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.8e-29 136.0 208 43.3
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 6.7e-29 134.0 88 69.3
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.3e-28 131.7 104 61.5
Lsat_1_v5_gn_8_46020 Lactuca sativa HOM05D001849 ORTHO05D004689 4.3e-28 131.3 107 63.6
TAR730G0002 Trochodendron aralioides HOM05D001849 ORTHO05D004689 9.7e-28 130.2 155 50.3
BcaNung06672 Brassica carinata HOM05D001849 ORTHO05D004689 1.1e-26 126.7 212 42.5
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.4e-26 125.6 100 61.0
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 1.0e-24 120.2 99 59.6
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 1.7e-24 119.4 90 65.6
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 7.2e-23 114.0 168 40.5
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 2.5e-20 105.5 469 24.3
Cre10.g425675 Chlamydomonas reinhardtii HOM05D001849 ORTHO05D004689 1.3e-19 103.2 317 25.9
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 1.7e-19 102.8 558 24.7
BolC2t10453H Brassica oleracea HOM05D001849 ORTHO05D004689 2.4e-18 99.0 55 90.9
C02p44100 Brassica napus HOM05D001849 ORTHO05D004689 3.4e-17 95.1 55 89.1
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.3e-16 93.2 93 52.7
Atru.chr12.2396 Acer truncatum HOM05D001849 ORTHO05D004689 1.7e-16 92.8 143 44.1
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.4e-13 83.2 100 45.0
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 5.1e-13 81.3 71 54.9
MBI03_g16538_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.5e-12 79.7 75 53.3
MBI13_g27860_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 3.3e-12 78.6 52 69.2
MBI04_g26258_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.8e-11 75.5 54 63.0
Zm00001eb307710 Zea mays HOM05D001849 ORTHO05D004689 3.7e-11 75.1 70 60.0
MBI15_g17575_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 8.2e-11 73.9 51 66.7
SMO304G0058 Selaginella moellendorffii HOM05D042764 ORTHO05D004689 4.5e-09 68.2 192 27.6
C01p30760 Brassica napus HOM05D001849 ORTHO05D042635 7.7e-09 67.4 171 35.1
Hma1.2p1_0225F.1_g094790 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 3.8e-08 65.1 96 42.7
CSS0002239 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.0e-08 64.7 41 75.6
CSS0017686 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.4e-07 63.2 50 62.0
Atru.chr12.2376 Acer truncatum HOM05D001849 ORTHO05D004689 4.2e-07 61.6 87 44.8
Hma1.2p1_0436F.1_g152830 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 6.1e-06 57.8 62 48.4


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