Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_30950_v3 Cicer arietinum L. HOM05D003208 ORTHO05D015518 2.8e-97 358.6 184 100.0
Ca_27302_v3 Cicer arietinum L. HOM05D003208 ORTHO05D015518 1.1e-80 303.5 159 98.7
Ca_04837_v3 Cicer arietinum L. HOM05D003208 ORTHO05D015518 5.4e-64 248.1 165 80.6
Ca_03752_v3 Cicer arietinum L. HOM05D003208 ORTHO05D015518 2.4e-59 232.6 163 78.5
Ca_17757_v3 Cicer arietinum L. HOM05D003208 ORTHO05D004103 1.2e-58 230.3 179 74.3
Medtr8g089980 Medicago truncatula HOM05D003208 ORTHO05D004103 1.3e-44 183.7 151 70.9
TPR.G6241 Trifolium pratense HOM05D003208 ORTHO05D004103 1.8e-43 179.9 176 61.4
Glyma.05G176233 Glycine max HOM05D003208 ORTHO05D004103 2.7e-39 166.0 180 57.2
Psat7g057040 Pisum sativum HOM05D003208 ORTHO05D004103 1.8e-38 163.3 182 58.8
Psat4g135880 Pisum sativum HOM05D001082 ORTHO05D005120 3.1e-35 152.5 160 60.0
Lalb_Chr13g0295911 Lupinus albus HOM05D003208 ORTHO05D004103 6.9e-35 151.4 179 52.0
Glyma.08G133700 Glycine max HOM05D003208 ORTHO05D004103 1.2e-34 150.6 162 56.2
Lalb_Chr07g0185301 Lupinus albus HOM05D003208 ORTHO05D004103 2.9e-33 146.0 158 56.3
Lj4g0011115 Lotus japonicus HOM05D003208 ORTHO05D004103 1.9e-29 133.3 159 54.7
Ca_13617_v3 Cicer arietinum L. HOM05D000036 ORTHO05D015518 9.7e-29 131.0 81 90.1
Phvul.002G261300 Phaseolus vulgaris HOM05D003208 ORTHO05D004103 5.9e-26 121.7 145 51.7
VMungo0251G3398 Vigna mungo HOM05D003208 ORTHO05D004103 7.7e-26 121.3 168 47.0
arahy.Tifrunner.gnm1.ann1.G6ARYH Arachis hypogaea HOM05D003208 ORTHO05D004103 5.5e-24 115.2 160 46.9
arahy.Tifrunner.gnm1.ann1.56KYQ9 Arachis hypogaea HOM05D003208 ORTHO05D004103 7.2e-24 114.8 160 46.2
Lalb_Chr23g0277521 Lupinus albus HOM05D003208 ORTHO05D004103 9.4e-24 114.4 207 43.5
Glyma.11G241400 Glycine max HOM05D003208 ORTHO05D004103 2.7e-23 112.8 163 47.9
Lj6g0024442 Lotus japonicus HOM05D003208 ORTHO05D004103 2.3e-22 109.8 164 44.5
TPR.G15995 Trifolium pratense HOM05D003208 ORTHO05D004103 2.3e-22 109.8 160 46.9
VMungo1383G1326 Vigna mungo HOM05D003208 ORTHO05D004103 2.3e-22 109.8 161 45.3
Ca_07080_v3 Cicer arietinum L. HOM05D000036 ORTHO05D015518 6.7e-22 108.2 80 76.2
Medtr3g086950 Medicago truncatula HOM05D003208 ORTHO05D004103 1.5e-21 107.1 160 45.0
Ca_07084_v3 Cicer arietinum L. HOM05D000036 ORTHO05D015518 6.3e-20 101.7 73 80.8
Psat4g135800 Pisum sativum HOM05D003208 ORTHO05D015518 6.9e-19 98.2 61 80.3
Psat5g090760 Pisum sativum HOM05D003208 ORTHO05D004103 1.5e-18 97.1 163 44.8
Phvul.001G253400 Phaseolus vulgaris HOM05D003208 ORTHO05D004103 3.4e-18 95.9 171 40.4
QL06p048297 Quercus lobata HOM05D003208 ORTHO05D004103 1.4e-14 84.0 188 36.7
Ca_16514_v3 Cicer arietinum L. HOM05D003208 ORTHO05D004103 1.5e-13 80.5 160 39.4
CiPaw.03G144800 Carya illinoinensis HOM05D003208 ORTHO05D004103 2.6e-13 79.7 187 36.9
Psat4g136360 Pisum sativum HOM05D001184 ORTHO05D003397 2.6e-13 79.7 54 72.2
Psat7g145480 Pisum sativum HOM05D003208 ORTHO05D004103 4.4e-13 79.0 119 44.5
COL.COLO4_27282 Corchorus olitorius HOM05D003208 ORTHO05D004103 1.7e-12 77.0 138 39.9
AL4G11900 Arabidopsis lyrata HOM05D003208 ORTHO05D004103 2.8e-12 76.3 90 51.1
CARHR113590 Cardamine hirsuta HOM05D003208 ORTHO05D004103 6.3e-12 75.1 149 36.2
TWI74G0107 Tripterygium wilfordii HOM05D003208 ORTHO05D004103 6.3e-12 75.1 143 38.5
Actinidia19997 Actinidia chinensis HOM05D003208 ORTHO05D004103 1.1e-11 74.3 147 39.5
CARHR246680 Cardamine hirsuta HOM05D003208 ORTHO05D004103 1.1e-11 74.3 159 40.3
Duzib147G1622 Durio zibethinus HOM05D003208 ORTHO05D004103 1.8e-11 73.6 85 47.1
Cpa.g.sc55.83 Carica papaya HOM05D003208 ORTHO05D004103 3.1e-11 72.8 154 35.7
Cc07_g14750 Coffea canephora HOM05D003208 ORTHO05D004103 3.1e-11 72.8 146 34.9
Haze_24868 Corylus avellana HOM05D003208 ORTHO05D004103 3.1e-11 72.8 127 37.8
Carub.0007s0196 Capsella rubella HOM05D003208 ORTHO05D004103 5.3e-11 72.0 134 38.8
Cfa002613 Carpinus fangiana HOM05D003208 ORTHO05D004103 7.0e-11 71.6 171 35.7
BcaB08g35063 Brassica carinata HOM05D003208 ORTHO05D004103 9.1e-11 71.2 160 38.1
Migut.H02342 Erythranthe guttata HOM05D003208 ORTHO05D004103 9.1e-11 71.2 140 37.9
AL7G12310 Arabidopsis lyrata HOM05D003208 ORTHO05D004103 1.2e-10 70.9 84 51.2
Thhalv10000050m.g Eutrema salsugineum HOM05D003208 ORTHO05D004103 1.2e-10 70.9 86 45.3
CsaV3_6G045280 Cucumis sativus L. HOM05D003208 ORTHO05D004103 1.6e-10 70.5 85 44.7
Potri.007G096100 Populus trichocarpa HOM05D003208 ORTHO05D004103 1.6e-10 70.5 85 44.7
MELO3C007741.2 Cucumis melo HOM05D003208 ORTHO05D004103 2.0e-10 70.1 85 44.7
DCAR_003477 Daucus carota HOM05D003208 ORTHO05D004103 2.0e-10 70.1 130 36.9
Peaxi162Scf00044g00112 Petunia axillaris HOM05D003208 ORTHO05D004103 2.0e-10 70.1 88 44.3
PGR102G0950 Punica granatum HOM05D003208 ORTHO05D004103 2.6e-10 69.7 110 40.9
THA.LOC104807678 Tarenaya hassleriana HOM05D003208 ORTHO05D004103 2.6e-10 69.7 146 35.6
CANSAT01G1547 Cannabis sativa HOM05D003208 ORTHO05D004103 3.5e-10 69.3 88 45.5
Sp7g35870 Schrenkiella parvula HOM05D003208 ORTHO05D004103 3.5e-10 69.3 87 44.8
BcaC02g08709 Brassica carinata HOM05D003208 ORTHO05D004103 4.5e-10 68.9 144 34.0
Hma1.2p1_0019F.1_g013690 Hydrangea macrophylla HOM05D003208 ORTHO05D004103 4.5e-10 68.9 175 34.3
Sed0002614 Sechium edule HOM05D003208 ORTHO05D004103 4.5e-10 68.9 146 32.9
EL10Ac6g14824 Beta vulgaris HOM05D003208 ORTHO05D004103 5.9e-10 68.6 149 36.2
Peaxi162Scf00381g00061 Petunia axillaris HOM05D003208 ORTHO05D004103 5.9e-10 68.6 88 43.2
BcaC02g08664 Brassica carinata HOM05D003208 ORTHO05D004103 7.7e-10 68.2 176 36.9
Sabra07G0079200 Salix brachista HOM05D003208 ORTHO05D004103 7.7e-10 68.2 85 43.5
Solyc11g010110.3 Solanum lycopersicum HOM05D003208 ORTHO05D004103 7.7e-10 68.2 135 37.0
Aa31LG6G15240 Aethionema arabicum HOM05D003208 ORTHO05D004103 1.0e-09 67.8 73 50.7
C04p51440 Brassica napus HOM05D003208 ORTHO05D004103 1.0e-09 67.8 129 36.4
Thhalv10000064m.g Eutrema salsugineum HOM05D003208 ORTHO05D004103 1.0e-09 67.8 77 48.1
Psat6g077920 Pisum sativum HOM05D003208 ORTHO05D009148 1.0e-09 67.8 79 48.1
AT2G22400 Arabidopsis thaliana HOM05D003208 ORTHO05D004103 1.3e-09 67.4 155 37.4
A04p16880 Brassica napus HOM05D003208 ORTHO05D004103 1.3e-09 67.4 154 33.8
BraA04t17321Z Brassica rapa HOM05D003208 ORTHO05D004103 1.3e-09 67.4 154 33.8
CAN.G905.28 Capsicum annuum HOM05D003208 ORTHO05D004103 1.3e-09 67.4 134 38.1
Dinv13221 Davidia involucrata HOM05D003208 ORTHO05D004103 1.3e-09 67.4 193 31.6
Atru.chr3.1361 Acer truncatum HOM05D003208 ORTHO05D004103 1.7e-09 67.0 152 34.2
BcaC02g08665 Brassica carinata HOM05D003208 ORTHO05D004103 2.2e-09 66.6 174 36.8
BolC4t26736H Brassica oleracea HOM05D003208 ORTHO05D004103 2.2e-09 66.6 149 37.6
Gohir.A02G129100 Gossypium hirsutum HOM05D003208 ORTHO05D004103 2.2e-09 66.6 148 35.8
Nitab4.5_0000128g0250 Nicotiana tabacum HOM05D003208 ORTHO05D004103 2.2e-09 66.6 87 47.1
Aa31LG7G14430 Aethionema arabicum HOM05D003208 ORTHO05D004103 2.9e-09 66.2 153 35.3
Ah.02g126130 Amaranthus hybridus HOM05D003208 ORTHO05D004103 2.9e-09 66.2 95 43.2
Ciclev10024895m.g Citrus clementina HOM05D003208 ORTHO05D004103 2.9e-09 66.2 191 31.4
Sed0018597 Sechium edule HOM05D003208 ORTHO05D004103 2.9e-09 66.2 145 33.1
SGA_v2.0_scaffold111G31500 Striga asiatica HOM05D003208 ORTHO05D004103 2.9e-09 66.2 107 36.4
Nitab4.5_0000241g0270 Nicotiana tabacum HOM05D003208 ORTHO05D004103 3.8e-09 65.9 134 34.3
Nitab4.5_0002604g0040 Nicotiana tabacum HOM05D003208 ORTHO05D004103 3.8e-09 65.9 135 34.8
Sp4g01430 Schrenkiella parvula HOM05D003208 ORTHO05D004103 3.8e-09 65.9 154 37.0
Sopen11g004910 Solanum pennellii HOM05D003208 ORTHO05D004103 3.8e-09 65.9 135 36.3
vmacro12976 Vaccinium macrocarpon HOM05D003208 ORTHO05D004103 3.8e-09 65.9 92 46.7
A09p57600 Brassica napus HOM05D003208 ORTHO05D004103 5.0e-09 65.5 120 39.2
Gohir.D03G039900 Gossypium hirsutum HOM05D003208 ORTHO05D004103 8.5e-09 64.7 148 35.8
Gorai.003G041000 Gossypium raimondii HOM05D003208 ORTHO05D004103 8.5e-09 64.7 148 35.8
Thecc.01G096900 Theobroma cacao HOM05D003208 ORTHO05D004103 8.5e-09 64.7 144 35.4
Prupe.6G191700 Prunus persica HOM05D003208 ORTHO05D004103 1.1e-08 64.3 143 35.7
ATR0684G089 Amborella trichopoda HOM05D003208 ORTHO05D004103 1.9e-08 63.5 95 45.3
Carub.0004s0156 Capsella rubella HOM05D003208 ORTHO05D004103 1.9e-08 63.5 145 35.2
SHI01116 Sapria himalayana HOM05D003208 ORTHO05D004103 1.9e-08 63.5 80 40.0
GSVIVG01003416001 Vitis vinifera HOM05D003208 ORTHO05D004103 1.9e-08 63.5 152 32.2
C01p01050 Brassica napus HOM05D003208 ORTHO05D004103 2.5e-08 63.2 40 70.0
BolC1t00102H Brassica oleracea HOM05D003208 ORTHO05D004103 2.5e-08 63.2 40 70.0
PSO541G6125 Papaver somniferum HOM05D003208 ORTHO05D004103 2.5e-08 63.2 167 33.5
MSTRG.2578 Avicennia marina HOM05D003208 ORTHO05D004103 3.2e-08 62.8 123 35.0
Lsat_1_v5_gn_5_45360 Lactuca sativa HOM05D003208 ORTHO05D004103 3.2e-08 62.8 96 40.6
AUR62027218 Chenopodium quinoa HOM05D003208 ORTHO05D004103 4.2e-08 62.4 146 37.0
PGSC0003DMG400016157 Solanum tuberosum HOM05D003208 ORTHO05D004103 4.2e-08 62.4 135 35.6
MD15G1321600 Malus domestica HOM05D003208 ORTHO05D004103 7.2e-08 61.6 195 30.8
SMO165G0121 Selaginella moellendorffii HOM05D003208 ORTHO05D004103 7.2e-08 61.6 90 38.9
AT4G40000 Arabidopsis thaliana HOM05D003208 ORTHO05D004103 9.4e-08 61.2 154 37.7
CAN.G151.12 Capsicum annuum HOM05D003208 ORTHO05D004103 9.4e-08 61.2 84 41.7
Manes.12G131000 Manihot esculenta HOM05D003208 ORTHO05D004103 9.4e-08 61.2 148 37.2
Rhsim10G0166900 Rhododendron simsii HOM05D003208 ORTHO05D004103 9.4e-08 61.2 173 31.8
BcaC07g41076 Brassica carinata HOM05D003208 ORTHO05D004103 1.2e-07 60.8 152 33.6
BcaNung05191 Brassica carinata HOM05D003208 ORTHO05D015518 1.2e-07 60.8 51 56.9
C08p40800 Brassica napus HOM05D003208 ORTHO05D004103 1.2e-07 60.8 152 34.2
BolC8t51644H Brassica oleracea HOM05D003208 ORTHO05D004103 1.2e-07 60.8 152 33.6
SalBow3G0841 Salvia bowleyana HOM05D003208 ORTHO05D004103 1.6e-07 60.5 171 29.8
SalBow3G1582 Salvia bowleyana HOM05D003208 ORTHO05D004103 1.6e-07 60.5 171 29.8
AagrBONN_evm.TU.Sc2ySwM_368.2854 Anthoceros agrestis HOM05D003208 ORTHO05D004103 2.1e-07 60.1 120 36.7
BcaNung00929 Brassica carinata HOM05D003208 ORTHO05D004103 2.1e-07 60.1 74 44.6
ClCG01G018610 Citrullus lanatus HOM05D003208 ORTHO05D004103 2.1e-07 60.1 35 71.4
Eucgr.I00532 Eucalyptus grandis HOM05D003208 ORTHO05D004103 2.1e-07 60.1 53 54.7
Thhalv10024482m.g Eutrema salsugineum HOM05D003208 ORTHO05D004103 2.1e-07 60.1 163 34.4
Lj2C541T5 Lonicera japonica HOM05D003208 ORTHO05D004103 2.1e-07 60.1 156 34.6
RcHm_v2.0_Chr2g0112501 Rosa chinensis HOM05D003208 ORTHO05D004103 2.1e-07 60.1 142 36.6
TWI77G0296 Tripterygium wilfordii HOM05D003208 ORTHO05D004103 2.1e-07 60.1 188 31.4
HanXRQChr07g0196311 Helianthus annuus HOM05D003208 ORTHO05D004103 2.7e-07 59.7 104 38.5
Sopen05g029940 Solanum pennellii HOM05D003208 ORTHO05D004103 3.6e-07 59.3 85 40.0
Aqoxy6G00734 Aquilegia oxysepala HOM05D003208 ORTHO05D004103 4.7e-07 58.9 128 38.3
Sc03g0000100 Simmondsia chinensis HOM05D003208 ORTHO05D004103 4.7e-07 58.9 98 40.8
CDE10G0727 Ceratophyllum demersum HOM05D003208 ORTHO05D004103 6.1e-07 58.5 126 40.5
Eucgr.H04746 Eucalyptus grandis HOM05D003208 ORTHO05D004103 6.1e-07 58.5 87 42.5
HPP92_013098 Vanilla planifolia HOM05D003208 ORTHO05D004103 6.1e-07 58.5 54 53.7
HPP92_013110 Vanilla planifolia HOM05D003208 ORTHO05D004103 6.1e-07 58.5 54 53.7
Mapoly0022s0008 Marchantia polymorpha HOM05D003208 ORTHO05D004103 8.0e-07 58.2 123 35.8
FvH4_1g20370 Fragaria vesca HOM05D003208 ORTHO05D004103 1.0e-06 57.8 143 39.2
Os08g0484400 Oryza sativa ssp. japonica HOM05D003208 ORTHO05D004103 1.0e-06 57.8 133 30.8
Os09g0471900 Oryza sativa ssp. japonica HOM05D003208 ORTHO05D004103 1.0e-06 57.8 145 33.8
PGR004G2195 Punica granatum HOM05D003208 ORTHO05D004103 1.0e-06 57.8 80 38.8
TAR628G1304 Trochodendron aralioides HOM05D003208 ORTHO05D004103 1.0e-06 57.8 114 36.0
Nn5g30027 Nelumbo nucifera HOM05D003208 ORTHO05D004103 1.4e-06 57.4 134 32.8
Nitab4.5_0012684g0010 Nicotiana tabacum HOM05D003208 ORTHO05D004103 1.4e-06 57.4 170 29.4
unitig_699.g19581 Utricularia gibba HOM05D003208 ORTHO05D004103 1.8e-06 57.0 92 38.0
FAN23G1395 Fragaria x ananassa HOM05D003208 ORTHO05D004103 2.3e-06 56.6 119 42.9
ECA246G0394 Erigeron canadensis HOM05D003208 ORTHO05D004103 3.0e-06 56.2 166 32.5
MBI02_g27964_MAGBIO Magnolia biondii HOM05D003208 ORTHO05D004103 3.0e-06 56.2 31 77.4
FAN26G2141 Fragaria x ananassa HOM05D003208 ORTHO05D004103 4.0e-06 55.8 119 42.9
BraA01t00090Z Brassica rapa HOM05D003208 ORTHO05D004103 5.2e-06 55.5 122 38.5
PSO675G7081 Papaver somniferum HOM05D003208 ORTHO05D004103 5.2e-06 55.5 117 36.8
Solyc05g051520.3 Solanum lycopersicum HOM05D003208 ORTHO05D004103 5.2e-06 55.5 153 31.4
Actinidia06543 Actinidia chinensis HOM05D003208 ORTHO05D004103 6.7e-06 55.1 124 36.3
AUR62003252 Chenopodium quinoa HOM05D003208 ORTHO05D004103 8.8e-06 54.7 184 31.5
PSO675G9385 Papaver somniferum HOM05D003208 ORTHO05D004103 8.8e-06 54.7 174 31.0


User provided reference genes

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