Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25791_v3 Cicer arietinum L. HOM05D003639 ORTHO05D004246 5.8e-189 664.8 573 100.0
Psat6g009840 Pisum sativum HOM05D003639 ORTHO05D004246 1.5e-165 587.0 575 91.7
Medtr3g045130 Medicago truncatula HOM05D003639 ORTHO05D004246 2.7e-154 549.7 405 76.8
TPR.G10246 Trifolium pratense HOM05D003639 ORTHO05D004246 3.9e-153 545.8 403 86.6
TPR.G1512 Trifolium pratense HOM05D003639 ORTHO05D004246 1.0e-140 504.6 496 91.1
Phvul.007G249600 Phaseolus vulgaris HOM05D003639 ORTHO05D004246 1.4e-139 500.7 580 81.2
Lj5g0008946 Lotus japonicus HOM05D003639 ORTHO05D004246 3.2e-139 499.6 408 79.7
Glyma.02G190600 Glycine max HOM05D003639 ORTHO05D004246 2.7e-138 496.5 576 82.5
Glyma.10G000800 Glycine max HOM05D003639 ORTHO05D004246 1.0e-132 478.0 575 83.3
VMungo0720G2842 Vigna mungo HOM05D003639 ORTHO05D004246 5.0e-132 475.7 574 82.1
arahy.Tifrunner.gnm1.ann1.Y8CJQK Arachis hypogaea HOM05D003639 ORTHO05D004246 5.5e-131 472.2 586 81.9
Lalb_Chr21g0305241 Lupinus albus HOM05D003639 ORTHO05D004246 4.7e-130 469.2 578 79.4
arahy.Tifrunner.gnm1.ann1.6W6BYV Arachis hypogaea HOM05D003639 ORTHO05D004246 3.9e-129 466.1 586 81.4
Haze_19749 Corylus avellana HOM05D003639 ORTHO05D004246 2.3e-113 413.7 417 63.8
CSS0048368 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 8.8e-113 411.8 331 75.5
TWI74G0834 Tripterygium wilfordii HOM05D003639 ORTHO05D004246 2.2e-111 407.1 337 74.5
Medtr5g022690 Medicago truncatula HOM05D003639 ORTHO05D004246 2.8e-111 406.8 319 72.1
Duzib132G0222 Durio zibethinus HOM05D003639 ORTHO05D004246 1.8e-110 404.1 365 64.7
Peaxi162Scf00130g00929 Petunia axillaris HOM05D003639 ORTHO05D004246 3.1e-110 403.3 324 79.0
Nitab4.5_0000826g0140 Nicotiana tabacum HOM05D003639 ORTHO05D004246 4.1e-110 402.9 336 76.5
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 1.2e-109 401.4 331 77.0
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 1.6e-109 401.0 331 77.3
Thecc.02G139000 Theobroma cacao HOM05D003639 ORTHO05D004246 1.6e-109 401.0 357 64.4
Duzib248G1450 Durio zibethinus HOM05D003639 ORTHO05D004246 2.7e-109 400.2 410 68.0
Nitab4.5_0001618g0260 Nicotiana tabacum HOM05D003639 ORTHO05D004246 2.7e-109 400.2 322 78.3
CAN.G1237.4 Capsicum annuum HOM05D003639 ORTHO05D004246 3.5e-109 399.8 327 76.8
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 2.3e-108 397.1 331 76.7
Hma1.2p1_2162F.1_g315680 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 1.1e-107 394.8 328 75.3
COL.COLO4_24957 Corchorus olitorius HOM05D003639 ORTHO05D004246 5.5e-107 392.5 402 65.7
Psat6g118240 Pisum sativum HOM05D003639 ORTHO05D004246 7.2e-107 392.1 404 71.0
Actinidia39194 Actinidia chinensis HOM05D003639 ORTHO05D004246 1.6e-106 391.0 345 72.2
CiPaw.09G042100 Carya illinoinensis HOM05D003639 ORTHO05D004246 6.1e-106 389.0 501 81.6
QL07p005224 Quercus lobata HOM05D003639 ORTHO05D004246 8.0e-106 388.7 409 66.3
MSTRG.6401 Avicennia marina HOM05D003639 ORTHO05D004246 1.4e-105 387.9 354 68.9
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 1.2e-104 384.8 410 66.1
TAR369G0628 Trochodendron aralioides HOM05D003639 ORTHO05D004246 1.2e-104 384.8 330 73.0
Rhsim03G0032000 Rhododendron simsii HOM05D003639 ORTHO05D004246 3.4e-104 383.3 407 64.4
Prupe.7G050300 Prunus persica HOM05D003639 ORTHO05D004246 4.4e-104 382.9 287 69.7
PGR004G0521 Punica granatum HOM05D003639 ORTHO05D004246 1.3e-103 381.3 588 67.3
MD12G1086300 Malus domestica HOM05D003639 ORTHO05D004246 2.8e-103 380.2 352 69.9
Gorai.008G015500 Gossypium raimondii HOM05D003639 ORTHO05D004246 4.9e-103 379.4 404 65.1
Nn7g37752 Nelumbo nucifera HOM05D003639 ORTHO05D004246 1.4e-102 377.9 410 65.9
Gohir.A12G015000 Gossypium hirsutum HOM05D003639 ORTHO05D004246 1.8e-102 377.5 405 64.9
ClCG08G008940 Citrullus lanatus HOM05D003639 ORTHO05D004246 2.4e-102 377.1 584 69.2
Gohir.D12G015400 Gossypium hirsutum HOM05D003639 ORTHO05D004246 3.1e-102 376.7 405 65.9
Manes.09G015900 Manihot esculenta HOM05D003639 ORTHO05D004246 4.1e-102 376.3 496 80.0
MELO3C026433.2 Cucumis melo HOM05D003639 ORTHO05D004246 5.9e-101 372.5 569 69.1
Migut.J01707 Erythranthe guttata HOM05D003639 ORTHO05D004246 5.9e-101 372.5 422 60.7
SalBow6G0945 Salvia bowleyana HOM05D003639 ORTHO05D004246 3.8e-100 369.8 359 59.9
CsaV3_6G036200 Cucumis sativus L. HOM05D003639 ORTHO05D004246 1.5e-99 367.9 397 64.7
CSS0037940 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 3.3e-99 366.7 278 69.4
Oeu023136.1 Olea europaea HOM05D003639 ORTHO05D004246 2.8e-98 363.6 410 64.1
SGA_v2.0_scaffold296G47577 Striga asiatica HOM05D003639 ORTHO05D004246 3.0e-97 360.1 320 70.9
DCAR_014011 Daucus carota HOM05D003639 ORTHO05D004246 4.0e-97 359.8 411 60.6
Potri.006G045800 Populus trichocarpa HOM05D003639 ORTHO05D004246 6.8e-97 359.0 363 61.4
Hund19126 Selenicereus undatus HOM05D003639 ORTHO05D004246 1.2e-96 358.2 347 68.9
Sc19g0008460 Simmondsia chinensis HOM05D003639 ORTHO05D004246 1.2e-96 358.2 329 71.1
Peaxi162Scf00177g10117 Petunia axillaris HOM05D003639 ORTHO05D004246 3.4e-96 356.7 249 74.3
AUR62024528 Chenopodium quinoa HOM05D003639 ORTHO05D004246 4.4e-96 356.3 413 60.0
Aqoxy3G00063 Aquilegia oxysepala HOM05D003639 ORTHO05D004246 4.9e-95 352.8 295 74.6
EL10Ac3g07157 Beta vulgaris HOM05D003639 ORTHO05D004246 6.4e-95 352.4 320 69.1
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 6.4e-95 352.4 321 72.0
Ciclev10006458m.g Citrus clementina HOM05D003639 ORTHO05D004246 8.3e-95 352.1 274 67.5
Ah.13g076790 Amaranthus hybridus HOM05D003639 ORTHO05D004246 1.1e-94 351.7 415 61.9
SGA_v2.0_scaffold69G23129 Striga asiatica HOM05D003639 ORTHO05D004246 3.2e-94 350.1 332 67.8
AUR62026120 Chenopodium quinoa HOM05D003639 ORTHO05D004246 5.4e-94 349.4 418 60.8
Eucgr.A02297 Eucalyptus grandis HOM05D003639 ORTHO05D004246 2.0e-93 347.4 406 63.5
Dinv30299 Davidia involucrata HOM05D003639 ORTHO05D004246 6.0e-93 345.9 281 67.6
Lsat_1_v5_gn_4_41600 Lactuca sativa HOM05D003639 ORTHO05D004246 1.9e-91 340.9 366 61.7
CDE04G0356 Ceratophyllum demersum HOM05D003639 ORTHO05D004246 5.6e-91 339.3 295 74.9
unitig_578.g16292 Utricularia gibba HOM05D003639 ORTHO05D004246 9.5e-91 338.6 306 71.6
CANSAT80G2101 Cannabis sativa HOM05D003639 ORTHO05D004246 1.6e-90 337.8 413 64.6
unitig_44.g31550 Utricularia gibba HOM05D003639 ORTHO05D004246 2.8e-90 337.0 277 66.8
CANSAT80G0359 Cannabis sativa HOM05D003639 ORTHO05D004246 7.5e-88 328.9 413 64.4
PSO832G3057 Papaver somniferum HOM05D003639 ORTHO05D004246 4.9e-87 326.2 389 53.7
Hma1.2p1_0338F.1_g129500 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 6.4e-87 325.9 284 72.9
Hma1.2p1_1333F.1_g276240 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 2.4e-86 323.9 284 71.5
C04p69090 Brassica napus HOM05D003639 ORTHO05D004246 9.2e-86 322.0 320 66.6
BolC4t28406H Brassica oleracea HOM05D003639 ORTHO05D004246 9.2e-86 322.0 320 66.6
A04p31660 Brassica napus HOM05D003639 ORTHO05D004246 2.7e-85 320.5 320 66.2
BraA04t18624Z Brassica rapa HOM05D003639 ORTHO05D004246 2.7e-85 320.5 320 66.2
THA.LOC104824426 Tarenaya hassleriana HOM05D003639 ORTHO05D004246 2.7e-85 320.5 323 65.0
CARHR136620 Cardamine hirsuta HOM05D003639 ORTHO05D004246 7.8e-85 318.9 322 65.8
Carub.0004s0611 Capsella rubella HOM05D003639 ORTHO05D004246 1.7e-84 317.8 322 65.2
SEGI_17823 Sequoiadendron giganteum HOM05D003639 ORTHO05D004246 2.3e-84 317.4 308 58.1
Aa31LG1G23520 Aethionema arabicum HOM05D003639 ORTHO05D004246 3.0e-84 317.0 350 62.9
Sed0002463 Sechium edule HOM05D003639 ORTHO05D004246 3.0e-84 317.0 504 71.2
AL4G39590 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 5.1e-84 316.2 322 64.9
ECA234G2577 Erigeron canadensis HOM05D003639 ORTHO05D004246 1.5e-83 314.7 309 66.3
PSO063G3048 Papaver somniferum HOM05D003639 ORTHO05D004246 1.5e-83 314.7 371 55.3
Sp4g23770 Schrenkiella parvula HOM05D003639 ORTHO05D004246 1.9e-83 314.3 365 60.0
ATR0665G145 Amborella trichopoda HOM05D003639 ORTHO05D004246 5.6e-83 312.8 321 64.8
Thhalv10016457m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 3.6e-82 310.1 322 64.0
Thhalv10000860m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 8.1e-82 308.9 320 64.7
AT2G41500 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 6.8e-81 305.8 322 64.0
FAN14G4828 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.8e-81 305.8 277 60.6
FvH4_6g24750 Fragaria vesca HOM05D003639 ORTHO05D004246 4.4e-80 303.1 277 60.3
Lj4C34T1 Lonicera japonica HOM05D003639 ORTHO05D004246 9.9e-80 302.0 305 58.7
BraA05t19227Z Brassica rapa HOM05D003639 ORTHO05D004246 1.3e-79 301.6 331 61.9
A05p02320 Brassica napus HOM05D003639 ORTHO05D004246 2.2e-79 300.8 331 61.6
C04p02760 Brassica napus HOM05D003639 ORTHO05D004246 6.4e-79 299.3 331 61.3
FAN09G0054 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-78 298.5 284 58.8
FAN02G3905 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.1e-78 296.6 269 61.0
BolC4t21916H Brassica oleracea HOM05D003639 ORTHO05D004246 5.4e-78 296.2 328 60.4
HPP92_010210 Vanilla planifolia HOM05D000527 ORTHO05D000559 1.6e-77 294.7 328 63.1
FAN05G0107 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.3e-76 291.6 249 62.2
Medtr0012s0110 Medicago truncatula HOM05D003639 ORTHO05D004246 1.3e-76 291.6 214 80.8
HPP92_010189 Vanilla planifolia HOM05D003639 ORTHO05D004246 1.7e-76 291.2 328 62.8
Os03g0355200 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 1.9e-75 287.7 293 64.2
Os03g0355400 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 1.9e-75 287.7 293 64.2
Atru.chr1.1191 Acer truncatum HOM05D003639 ORTHO05D004246 1.1e-73 282.0 291 61.9
BcaNung06794 Brassica carinata HOM05D003639 ORTHO05D004246 2.0e-72 277.7 331 59.2
RcHm_v2.0_Chr3g0484331 Rosa chinensis HOM05D003639 ORTHO05D004246 2.2e-71 274.2 229 63.3
VMungo0540G1675 Vigna mungo HOM05D003639 ORTHO05D004246 4.9e-71 273.1 181 74.6
Sabra06G0031300 Salix brachista HOM05D003639 ORTHO05D004246 4.2e-70 270.0 374 50.3
Potri.016G042250 Populus trichocarpa HOM05D003639 ORTHO05D004246 7.1e-70 269.2 341 50.7
Pp3c9_11970 Physcomitrium patens HOM05D003639 ORTHO05D004246 2.7e-69 267.3 337 50.1
TAR065G0005 Trochodendron aralioides HOM05D003639 ORTHO05D004246 2.7e-69 267.3 229 74.7
BcaC02g12784 Brassica carinata HOM05D003639 ORTHO05D004246 5.1e-68 263.1 331 58.3
Mapoly0061s0123 Marchantia polymorpha HOM05D003639 ORTHO05D004246 2.1e-66 257.7 291 53.6
CBR_g723 Chara braunii HOM05D003639 ORTHO05D004246 3.4e-64 250.4 323 46.7
AagrBONN_evm.TU.Sc2ySwM_117.1154 Anthoceros agrestis HOM05D003639 ORTHO05D004246 2.2e-63 247.7 334 47.3
Cc06_g18350 Coffea canephora HOM05D003639 ORTHO05D004246 2.2e-63 247.7 213 77.0
GSVIVG01033551001 Vitis vinifera HOM05D003639 ORTHO05D004246 3.2e-62 243.8 213 74.2
Zm00001eb017050 Zea mays HOM05D003639 ORTHO05D004246 2.1e-58 231.1 194 61.9
MD14G1080500 Malus domestica HOM05D003639 ORTHO05D004246 2.6e-56 224.2 194 60.3
Mapoly0014s0154 Marchantia polymorpha HOM05D003639 ORTHO05D004246 5.4e-54 216.5 257 50.2
SMO356G0612 Selaginella moellendorffii HOM05D003639 ORTHO05D004246 3.0e-52 210.7 233 52.4
Sed0000547 Sechium edule HOM05D003639 ORTHO05D004246 5.8e-48 196.4 157 66.2
BcaB06g29187 Brassica carinata HOM05D003639 ORTHO05D004246 1.2e-45 188.7 187 69.5
FAN10G2664 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.3e-44 184.5 178 59.0
FAN14G5922 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.9e-44 183.7 178 59.0
FAN19G1783 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.9e-44 183.7 190 56.8
FAN17G3014 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.7e-44 183.0 178 59.0
BcaNung04072 Brassica carinata HOM05D003639 ORTHO05D004246 1.1e-43 182.2 155 60.6
FAN03G0195 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-43 182.2 178 58.4
FAN07G1748 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-43 182.2 178 58.4
FAN23G2202 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-43 182.2 178 58.4
FAN06G0994 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.3e-43 180.3 178 57.9
FAN01G0512 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.6e-43 179.9 178 58.4
FAN24G0290 Fragaria x ananassa HOM05D003639 ORTHO05D004246 7.4e-43 179.5 190 56.8
FAN28G1931 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.1e-42 177.9 178 57.3
FAN13G2401 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.8e-42 177.6 160 61.2
FAN22G1757 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.8e-42 177.6 178 57.3
FAN27G3180 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.8e-41 174.9 178 57.3
vmacro21947 Vaccinium macrocarpon HOM05D003639 ORTHO05D004246 2.4e-41 174.5 321 43.0
FAN09G4382 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.9e-41 172.9 173 57.8
MELO3C019779.2 Cucumis melo HOM05D003639 ORTHO05D004246 8.4e-39 166.0 181 52.5
FAN16G0989 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.9e-38 164.9 178 55.6
BolC5t34692H Brassica oleracea HOM05D003639 ORTHO05D004246 1.9e-35 154.8 180 52.8
RcHm_v2.0_Chr3g0484501 Rosa chinensis HOM05D003639 ORTHO05D004246 6.3e-34 149.8 147 53.7
FAN25G1774 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.9e-32 143.3 178 50.0
Atru.chr6.1378 Acer truncatum HOM05D003639 ORTHO05D004246 5.0e-31 140.2 202 57.9
AT2G05720 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 6.5e-31 139.8 141 53.9
MCO12G002 Micromonas commoda HOM05D003639 ORTHO05D004246 2.5e-30 137.9 297 35.4
RcHm_v2.0_Chr3g0484401 Rosa chinensis HOM05D003639 ORTHO05D004246 9.4e-30 136.0 103 65.0
FAN17G0086 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.4e-28 132.1 139 57.6
Atru.chr6.1379 Acer truncatum HOM05D003639 ORTHO05D004246 9.7e-27 125.9 78 76.9
Psat4g106880 Pisum sativum HOM05D003639 ORTHO05D004246 1.7e-26 125.2 118 63.6
MELO3C019777.2 Cucumis melo HOM05D003639 ORTHO05D004246 6.7e-20 103.2 170 45.3
AL3G43260 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 8.8e-20 102.8 82 63.4
Cfa024100 Carpinus fangiana HOM05D003639 ORTHO05D004246 2.8e-18 97.8 213 31.5
Cre16.g662800 Chlamydomonas reinhardtii HOM05D003639 ORTHO05D004246 7.0e-17 93.2 132 42.4
Atru.chr1.1192 Acer truncatum HOM05D003639 ORTHO05D004246 3.2e-14 84.3 93 80.6
Lj4A34T49 Lonicera japonica HOM05D003639 ORTHO05D004246 3.2e-14 84.3 93 83.9
Atru.chr6.1380 Acer truncatum HOM05D003639 ORTHO05D004246 3.0e-12 77.8 93 44.1
QL04p089213 Quercus lobata HOM05D003639 ORTHO05D004246 1.5e-11 75.5 206 34.0
PRCOL_00003365 Prasinoderma coloniale HOM05D003639 ORTHO05D004246 3.3e-11 74.3 189 34.4
QL05p082994 Quercus lobata HOM05D003639 ORTHO05D004246 7.0e-09 66.6 173 35.8
Manes.08G135900 Manihot esculenta HOM05D000836 ORTHO05D000709 1.7e-07 62.0 103 35.0
EL10Ac7g17827 Beta vulgaris HOM05D000836 ORTHO05D000709 8.5e-07 59.7 90 40.0
AUR62008907 Chenopodium quinoa HOM05D000836 ORTHO05D000709 1.5e-06 58.9 89 38.2
Haze_19776 Corylus avellana HOM05D003639 ORTHO05D004246 3.2e-06 57.8 64 48.4
ATR0794G100 Amborella trichopoda HOM05D000836 ORTHO05D000709 5.5e-06 57.0 81 37.0
Nn3g19956 Nelumbo nucifera HOM05D000836 ORTHO05D000709 7.2e-06 56.6 81 38.3
BcaNung04071 Brassica carinata HOM05D003639 ORTHO05D004246 9.4e-06 56.2 95 62.1


User provided reference genes

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