Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.1e-226 789.6 406 100.0
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 4.8e-206 721.1 394 91.9
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 7.7e-204 713.8 405 89.1
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 4.7e-201 704.5 405 87.9
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 2.0e-199 699.1 404 85.6
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 2.4e-197 692.2 405 87.4
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 1.6e-196 689.5 405 85.9
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 2.1e-193 679.1 405 85.2
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 1.6e-188 662.9 411 82.7
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 2.3e-184 649.0 382 83.2
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 6.8e-184 647.5 381 83.2
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 3.7e-174 615.1 405 77.0
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 4.3e-170 601.7 406 73.4
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 2.8e-169 599.0 406 73.9
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 2.8e-169 599.0 405 75.1
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 4.7e-169 598.2 405 74.1
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 6.2e-169 597.8 405 75.3
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 5.8e-167 591.3 395 74.9
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.4e-165 584.7 405 73.3
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 9.2e-165 583.9 405 72.3
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 3.5e-164 582.0 403 72.5
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 6.0e-164 581.3 405 74.8
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 2.3e-163 579.3 405 72.1
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 3.0e-163 578.9 405 71.6
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 3.0e-163 578.9 405 72.3
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.1e-162 577.0 406 71.4
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 1.5e-162 576.6 405 72.3
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 1.6e-161 573.2 406 70.9
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.1e-161 572.8 405 71.6
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.1e-161 572.8 406 70.9
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 6.2e-161 571.2 405 72.3
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 8.1e-161 570.9 405 70.6
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 1.1e-160 570.5 405 72.6
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 2.3e-160 569.3 406 71.4
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 5.2e-160 568.2 405 72.3
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 1.2e-159 567.0 405 72.1
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 3.4e-159 565.5 405 71.9
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 2.2e-158 562.8 405 70.6
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 2.2e-158 562.8 405 70.4
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 3.7e-158 562.0 405 70.4
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 6.4e-158 561.2 405 70.6
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.1e-157 560.5 418 68.4
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.1e-157 560.5 405 71.1
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 1.1e-157 560.5 405 70.1
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 1.9e-157 559.7 405 71.1
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 4.1e-157 558.5 406 70.4
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 5.4e-157 558.1 405 68.6
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 4.6e-156 555.1 406 69.2
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 7.8e-156 554.3 405 69.1
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 1.0e-155 553.9 395 71.1
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 5.1e-155 551.6 405 70.9
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 5.1e-155 551.6 402 70.9
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 6.6e-155 551.2 406 69.5
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 6.6e-155 551.2 405 68.9
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 6.6e-155 551.2 405 68.9
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 8.6e-155 550.8 405 68.4
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 1.5e-154 550.1 406 69.2
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 5.6e-154 548.1 405 69.9
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 5.6e-154 548.1 394 69.0
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 2.1e-153 546.2 406 69.2
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 2.1e-153 546.2 406 69.0
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 6.2e-153 544.7 406 68.2
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 8.1e-153 544.3 406 68.7
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 8.1e-153 544.3 406 68.7
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 1.1e-152 543.9 406 68.2
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 1.2e-151 540.4 396 66.7
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 2.0e-151 539.7 406 69.0
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 2.6e-151 539.3 403 69.2
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 3.4e-151 538.9 406 68.2
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 3.4e-151 538.9 415 67.2
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 5.8e-151 538.1 405 67.2
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 5.8e-151 538.1 406 67.2
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 2.2e-150 536.2 439 65.1
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 8.4e-150 534.3 419 66.3
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 1.0e-147 527.3 403 67.7
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 1.3e-147 526.9 428 65.2
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 4.7e-145 518.5 444 62.6
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 6.2e-145 518.1 405 65.4
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 8.1e-145 517.7 408 64.7
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 9.0e-144 514.2 408 65.9
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 1.2e-143 513.8 402 66.4
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 4.4e-143 511.9 405 63.2
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 1.7e-142 510.0 406 65.8
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 2.2e-142 509.6 391 65.7
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 2.9e-142 509.2 394 64.2
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 1.2e-140 503.8 394 64.0
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 1.9e-138 496.5 365 69.9
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 4.3e-138 495.4 405 63.2
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.8e-137 492.7 406 62.6
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 3.6e-137 492.3 395 65.6
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 1.1e-136 490.7 489 55.4
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 1.8e-136 490.0 406 60.3
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 1.8e-136 490.0 403 62.3
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 1.7e-134 483.4 386 61.9
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.9e-134 482.6 395 62.8
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 6.4e-134 481.5 405 62.7
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 6.4e-126 454.9 406 59.9
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 1.3e-123 447.2 411 58.4
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 6.7e-123 444.9 321 68.5
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 7.7e-111 404.8 302 68.9
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.4e-109 400.6 301 68.1
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 5.5e-101 372.1 404 52.2
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 9.4e-101 371.3 395 50.1
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 1.2e-95 354.4 396 48.0
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 1.2e-95 354.4 406 49.5
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.5e-95 354.0 255 71.4
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 1.2e-87 327.8 255 65.9
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 1.6e-76 290.8 254 59.1
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 2.7e-76 290.0 297 52.5
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 5.0e-70 269.2 256 54.3
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 8.0e-68 261.9 397 39.3
Glyma.16G010300 Glycine max HOM05D001849 ORTHO05D004689 5.4e-64 249.2 151 82.8
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.0e-54 218.4 174 66.1
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.4e-48 196.1 194 59.8
HPP92_021920 Vanilla planifolia HOM05D001849 ORTHO05D004689 1.2e-47 194.9 144 66.0
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 8.1e-44 182.2 455 31.9
SEGI_09459 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.7e-41 174.5 173 51.4
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 5.8e-26 122.9 99 66.7
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.4e-24 117.5 75 78.7
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 6.6e-22 109.4 83 65.1
CSS0033574 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.6e-20 104.8 78 69.2
Zm00001eb307710 Zea mays HOM05D001849 ORTHO05D004689 1.7e-09 68.2 73 53.4
CSS0020573 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.2e-08 63.5 76 47.4
SMO304G0098 Selaginella moellendorffii HOM05D027722 ORTHO05D004689 1.2e-07 62.0 212 28.8
SMO304G0054 Selaginella moellendorffii HOM05D027722 ORTHO05D004689 2.7e-07 60.8 212 28.8
SMO164G0082 Selaginella moellendorffii HOM05D027722 ORTHO05D004689 6.0e-07 59.7 158 27.8
BcaNung06672 Brassica carinata HOM05D001849 ORTHO05D004689 2.3e-06 57.8 43 65.1


User provided reference genes

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