Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_22423_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 2.9e-51 204.9 102 100.0
Ca_06453_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 3.4e-31 138.3 100 77.0
TPR.G14966 Trifolium pratense HOM05D004647 ORTHO05D005349 8.3e-30 133.7 100 74.0
Medtr5g043110 Medicago truncatula HOM05D004647 ORTHO05D005349 1.4e-29 132.9 100 73.0
Psat2g127400 Pisum sativum HOM05D004647 ORTHO05D005349 1.4e-29 132.9 100 74.0
Lalb_Chr10g0098541 Lupinus albus HOM05D004647 ORTHO05D005349 1.6e-28 129.4 100 72.0
TPR.G19928 Trifolium pratense HOM05D004647 ORTHO05D005349 2.0e-28 129.0 100 71.0
Lj2g0019057 Lotus japonicus HOM05D004647 ORTHO05D005349 5.9e-28 127.5 100 71.0
Manes.14G066300 Manihot esculenta HOM05D004647 ORTHO05D005349 7.7e-28 127.1 100 71.0
Potri.012G080300 Populus trichocarpa HOM05D004647 ORTHO05D005349 7.7e-28 127.1 100 71.0
Glyma.01G053700 Glycine max HOM05D004647 ORTHO05D005349 1.3e-27 126.3 100 71.0
Glyma.02G112000 Glycine max HOM05D004647 ORTHO05D005349 2.3e-27 125.6 100 70.0
Sabra12G0057400 Salix brachista HOM05D004647 ORTHO05D005349 2.3e-27 125.6 100 70.0
CiPaw.11G026900 Carya illinoinensis HOM05D004647 ORTHO05D005349 3.8e-27 124.8 107 66.4
Phvul.002G091200 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 6.5e-27 124.0 100 70.0
Aqoxy3G01032 Aquilegia oxysepala HOM05D004647 ORTHO05D005349 8.6e-27 123.6 100 69.0
QL02p100995 Quercus lobata HOM05D004647 ORTHO05D005349 8.6e-27 123.6 100 69.0
QL02p101061 Quercus lobata HOM05D004647 ORTHO05D005349 8.6e-27 123.6 101 68.3
arahy.Tifrunner.gnm1.ann1.HI7WIW Arachis hypogaea HOM05D004647 ORTHO05D005349 1.1e-26 123.2 100 68.0
arahy.Tifrunner.gnm1.ann1.T8C5SJ Arachis hypogaea HOM05D004647 ORTHO05D005349 1.1e-26 123.2 100 68.0
Medtr5g009430 Medicago truncatula HOM05D004647 ORTHO05D005349 1.1e-26 123.2 100 69.0
VMungo1215G3307 Vigna mungo HOM05D004647 ORTHO05D005349 1.1e-26 123.2 100 69.0
Phvul.003G111100 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 1.9e-26 122.5 100 69.0
Rhsim12G0164400 Rhododendron simsii HOM05D004647 ORTHO05D005349 2.5e-26 122.1 100 67.0
GSVIVG01007738001 Vitis vinifera HOM05D004647 ORTHO05D005349 3.3e-26 121.7 100 69.0
PSO017G4490 Papaver somniferum HOM05D004647 ORTHO05D005349 5.5e-26 120.9 100 68.0
PSO478G0146 Papaver somniferum HOM05D004647 ORTHO05D005349 5.5e-26 120.9 100 68.0
Haze_07464 Corylus avellana HOM05D004647 ORTHO05D005349 1.2e-25 119.8 100 67.0
DCAR_028017 Daucus carota HOM05D004647 ORTHO05D005349 1.2e-25 119.8 100 66.0
ATR0680G372 Amborella trichopoda HOM05D004647 ORTHO05D005349 1.6e-25 119.4 100 67.0
ClCG06G016990 Citrullus lanatus HOM05D004647 ORTHO05D005349 1.6e-25 119.4 100 66.0
Ciclev10021986m.g Citrus clementina HOM05D004647 ORTHO05D005349 1.6e-25 119.4 100 66.0
Hma1.2p1_0701F.1_g205920 Hydrangea macrophylla HOM05D004647 ORTHO05D005349 1.6e-25 119.4 100 66.0
vmacro16607 Vaccinium macrocarpon HOM05D004647 ORTHO05D005349 1.6e-25 119.4 100 66.0
Lj5A124T65 Lonicera japonica HOM05D004647 ORTHO05D005349 2.1e-25 119.0 100 67.0
AUR62030968 Chenopodium quinoa HOM05D004647 ORTHO05D005349 2.8e-25 118.6 100 66.0
THA.LOC104807116 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 2.8e-25 118.6 102 64.7
THA.LOC104815465 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 2.8e-25 118.6 102 64.7
THA.LOC104824976 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 2.8e-25 118.6 102 64.7
QL10p011820 Quercus lobata HOM05D004647 ORTHO05D005349 3.6e-25 118.2 100 68.0
Sed0013198 Sechium edule HOM05D004647 ORTHO05D005349 4.7e-25 117.9 100 64.0
Thecc.03G011300 Theobroma cacao HOM05D004647 ORTHO05D005349 6.1e-25 117.5 100 66.0
Hund09433 Selenicereus undatus HOM05D004647 ORTHO05D005349 1.0e-24 116.7 100 66.0
AUR62008215 Chenopodium quinoa HOM05D004647 ORTHO05D005349 1.4e-24 116.3 100 65.0
Gohir.A03G097600 Gossypium hirsutum HOM05D004647 ORTHO05D005349 1.4e-24 116.3 100 65.0
MBI16_g05634_MAGBIO Magnolia biondii HOM05D004647 ORTHO05D005349 1.4e-24 116.3 100 64.0
EL10Ac5g10752 Beta vulgaris HOM05D004647 ORTHO05D005349 1.8e-24 115.9 100 65.0
DCAR_016485 Daucus carota HOM05D004647 ORTHO05D005349 1.8e-24 115.9 100 64.0
Actinidia19099 Actinidia chinensis HOM05D004647 ORTHO05D005349 2.3e-24 115.5 100 64.0
Eucgr.B00371 Eucalyptus grandis HOM05D004647 ORTHO05D005349 2.3e-24 115.5 99 65.7
QL02p101105 Quercus lobata HOM05D004647 ORTHO05D005349 2.3e-24 115.5 108 63.0
Sc10g0010060 Simmondsia chinensis HOM05D004647 ORTHO05D005349 3.0e-24 115.2 100 66.0
Aa31LG2G17760 Aethionema arabicum HOM05D004647 ORTHO05D005349 4.0e-24 114.8 102 62.7
CAN.G628.78 Capsicum annuum HOM05D004647 ORTHO05D005349 4.0e-24 114.8 100 65.0
Nitab4.5_0000003g0580 Nicotiana tabacum HOM05D004647 ORTHO05D005349 4.0e-24 114.8 100 65.0
HPP92_005895 Vanilla planifolia HOM05D004647 ORTHO05D005349 4.0e-24 114.8 100 63.0
CSS0008435 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 5.2e-24 114.4 99 65.7
CARHR240100 Cardamine hirsuta HOM05D004647 ORTHO05D005349 5.2e-24 114.4 102 60.8
Gohir.D02G116700 Gossypium hirsutum HOM05D004647 ORTHO05D005349 8.9e-24 113.6 100 64.0
Gorai.005G137000 Gossypium raimondii HOM05D004647 ORTHO05D005349 8.9e-24 113.6 100 64.0
COL.COLO4_30028 Corchorus olitorius HOM05D004647 ORTHO05D005349 1.2e-23 113.2 100 64.0
SEGI_17588 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 1.2e-23 113.2 100 64.0
SEGI_39775 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 1.2e-23 113.2 100 64.0
CANSAT64G1060 Cannabis sativa HOM05D004647 ORTHO05D005349 1.5e-23 112.8 100 64.0
CARHR059710 Cardamine hirsuta HOM05D004647 ORTHO05D005349 1.5e-23 112.8 100 62.0
Carub.0007s0838 Capsella rubella HOM05D004647 ORTHO05D005349 2.0e-23 112.5 102 61.8
Solyc06g071460.3 Solanum lycopersicum HOM05D004647 ORTHO05D005349 2.6e-23 112.1 100 64.0
Sopen06g027740 Solanum pennellii HOM05D004647 ORTHO05D005349 2.6e-23 112.1 100 64.0
TWI15G0781 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 2.6e-23 112.1 99 63.6
TWI53G1063 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 3.4e-23 111.7 99 63.6
BcaC01g01036 Brassica carinata HOM05D004647 ORTHO05D005349 5.7e-23 110.9 102 62.7
A08p18330 Brassica napus HOM05D004647 ORTHO05D005349 5.7e-23 110.9 102 62.7
BolC3t21057H Brassica oleracea HOM05D004647 ORTHO05D005349 5.7e-23 110.9 102 62.7
BraA08t33790Z Brassica rapa HOM05D004647 ORTHO05D005349 5.7e-23 110.9 102 62.7
Cc04_g13970 Coffea canephora HOM05D004647 ORTHO05D005349 5.7e-23 110.9 100 62.0
Nitab4.5_0000866g0170 Nicotiana tabacum HOM05D004647 ORTHO05D005349 5.7e-23 110.9 100 64.0
Sp7g29960 Schrenkiella parvula HOM05D004647 ORTHO05D005349 7.5e-23 110.5 102 61.8
Zm00001eb157720 Zea mays HOM05D004647 ORTHO05D005349 7.5e-23 110.5 100 62.0
AL7G19680 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 9.8e-23 110.2 102 60.8
BcaB03g12733 Brassica carinata HOM05D004647 ORTHO05D005349 9.8e-23 110.2 102 62.7
PGR083G2070 Punica granatum HOM05D004647 ORTHO05D005349 9.8e-23 110.2 99 60.6
PGSC0003DMG400027091 Solanum tuberosum HOM05D004647 ORTHO05D005349 9.8e-23 110.2 100 63.0
Carub.0004s0503 Capsella rubella HOM05D004647 ORTHO05D005349 1.7e-22 109.4 100 61.0
Atru.chr9.2461 Acer truncatum HOM05D004647 ORTHO05D005349 2.2e-22 109.0 100 60.0
Ca_07701_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 2.2e-22 109.0 111 60.4
Os01g0891400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 2.2e-22 109.0 100 61.0
Prupe.5G174300 Prunus persica HOM05D004647 ORTHO05D005349 2.2e-22 109.0 100 59.0
Thhalv10026115m.g Eutrema salsugineum HOM05D004647 ORTHO05D005349 2.8e-22 108.6 101 58.4
Os01g0661400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 2.8e-22 108.6 100 60.0
Migut.I00016 Erythranthe guttata HOM05D004647 ORTHO05D005349 3.7e-22 108.2 100 60.0
Oeu035987.1 Olea europaea HOM05D004647 ORTHO05D005349 3.7e-22 108.2 100 61.0
MD06G1174300 Malus domestica HOM05D004647 ORTHO05D005349 4.9e-22 107.8 100 59.0
Peaxi162Scf00689g00228 Petunia axillaris HOM05D004647 ORTHO05D005349 4.9e-22 107.8 100 63.0
AT4G32175 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 8.3e-22 107.1 101 60.4
CSS0025503 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 8.3e-22 107.1 100 62.0
RcHm_v2.0_Chr7g0193601 Rosa chinensis HOM05D004647 ORTHO05D005349 8.3e-22 107.1 100 61.0
MSTRG.11448 Avicennia marina HOM05D004647 ORTHO05D005349 1.8e-21 105.9 100 58.0
AL4G16790 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 5.4e-21 104.4 100 59.0
AT2G25355 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 5.4e-21 104.4 100 59.0
Lsat_1_v5_gn_4_75321 Lactuca sativa HOM05D004647 ORTHO05D005349 1.2e-20 103.2 100 61.0
HanXRQChr16g0504011 Helianthus annuus HOM05D004647 ORTHO05D005349 1.6e-20 102.8 100 62.0
FAN08G1047 Fragaria x ananassa HOM05D004647 ORTHO05D005349 3.5e-20 101.7 100 59.0
FAN13G1078 Fragaria x ananassa HOM05D004647 ORTHO05D005349 3.5e-20 101.7 100 59.0
FAN04G0366 Fragaria x ananassa HOM05D004647 ORTHO05D005349 4.5e-20 101.3 100 59.0
SGA_v2.0_scaffold90G27942 Striga asiatica HOM05D004647 ORTHO05D005349 4.5e-20 101.3 100 56.0
SalBow3G4197 Salvia bowleyana HOM05D004647 ORTHO05D005349 1.3e-19 99.8 100 55.0
FvH4_5g05270 Fragaria vesca HOM05D004647 ORTHO05D005349 2.3e-19 99.0 100 58.0
FAN18G2734 Fragaria x ananassa HOM05D004647 ORTHO05D005349 2.3e-19 99.0 100 58.0
FAN18G2015 Fragaria x ananassa HOM05D004647 ORTHO05D005349 2.9e-19 98.6 100 58.0
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 5.0e-19 97.8 101 60.4
ECA232G2959 Erigeron canadensis HOM05D004647 ORTHO05D005349 6.6e-19 97.4 100 60.0
SEGI_00924 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 6.6e-19 97.4 96 59.4
unitig_52.g17486 Utricularia gibba HOM05D004647 ORTHO05D005349 6.6e-19 97.4 100 53.0
Glyma.19G045000 Glycine max HOM05D004647 ORTHO05D005349 2.8e-17 92.0 100 57.0
SMO358G0755 Selaginella moellendorffii HOM05D004647 ORTHO05D005349 1.0e-16 90.1 96 52.1
Sed0007118 Sechium edule HOM05D004647 ORTHO05D005349 1.4e-16 89.7 83 60.2
CAN.G110.1 Capsicum annuum HOM05D004647 ORTHO05D005349 4.0e-16 88.2 97 52.6
MD06G1174500 Malus domestica HOM05D004647 ORTHO05D005349 6.8e-16 87.4 102 52.9
Potri.015G075400 Populus trichocarpa HOM05D004647 ORTHO05D005349 6.8e-16 87.4 86 57.0
Pp3c9_4960 Physcomitrium patens HOM05D004647 ORTHO05D005349 1.2e-15 86.7 100 52.0
TAR374G0909 Trochodendron aralioides HOM05D004647 ORTHO05D005349 1.5e-15 86.3 66 66.7
Mapoly0033s0011 Marchantia polymorpha HOM05D004647 ORTHO05D005349 4.4e-15 84.7 97 47.4
Zm00001eb157740 Zea mays HOM05D004647 ORTHO05D005349 5.8e-15 84.3 66 66.7
Cpa.g.sc124.56 Carica papaya HOM05D004647 ORTHO05D005349 1.7e-14 82.8 66 65.2
PGSC0003DMG400042364 Solanum tuberosum HOM05D004647 ORTHO05D005349 5.4e-13 77.8 83 53.0
AagrBONN_evm.TU.Sc2ySwM_117.3294 Anthoceros agrestis HOM05D004647 ORTHO05D005349 3.5e-12 75.1 97 46.4
CDE11G0116 Ceratophyllum demersum HOM05D004647 ORTHO05D005349 1.0e-11 73.6 65 60.0
CBR_g61059 Chara braunii HOM05D004647 ORTHO05D005349 7.3e-10 67.4 90 46.7
CSS0039197 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 8.0e-09 63.9 65 55.4
Cre07.g319900 Chlamydomonas reinhardtii HOM05D004647 ORTHO05D005349 1.1e-08 63.5 97 40.2
Oeu005668.1 Olea europaea HOM05D004647 ORTHO05D005349 2.0e-07 59.3 54 55.6
Zm00001eb359590 Zea mays HOM05D004647 ORTHO05D005349 2.0e-07 59.3 51 58.8


User provided reference genes

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