Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 1.6e-141 506.9 255 100.0
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 3.7e-101 372.9 261 75.1
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 4.7e-96 355.9 256 73.0
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 1.0e-95 354.8 256 73.0
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 3.3e-81 306.6 267 64.8
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 3.6e-80 303.1 269 65.4
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 1.4e-79 301.2 269 65.8
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 1.5e-78 297.7 265 61.9
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 4.9e-77 292.7 268 61.2
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 5.4e-76 289.3 275 60.0
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 5.4e-76 289.3 253 61.3
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 1.0e-71 275.0 172 80.2
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 1.8e-71 274.2 257 59.9
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 5.2e-71 272.7 262 60.3
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 8.9e-71 271.9 260 58.5
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 1.5e-70 271.2 257 58.8
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 8.3e-69 265.4 246 59.3
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 1.4e-68 264.6 242 59.1
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 2.4e-68 263.8 254 59.1
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 2.0e-67 260.8 263 56.7
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 3.5e-67 260.0 272 54.4
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 6.0e-67 259.2 257 57.2
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.0e-66 258.5 273 55.3
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.3e-66 258.1 245 59.2
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 3.9e-66 256.5 273 54.2
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 5.0e-66 256.1 224 61.6
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 6.6e-66 255.8 274 54.0
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 6.6e-66 255.8 273 53.8
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 1.1e-65 255.0 257 56.8
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 2.5e-65 253.8 275 53.8
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 3.3e-65 253.4 271 54.2
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 3.3e-65 253.4 256 54.7
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 1.2e-64 251.5 287 52.3
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 1.6e-64 251.1 275 53.5
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 2.1e-64 250.8 276 53.6
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 2.8e-64 250.4 266 54.5
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 4.7e-64 249.6 183 69.4
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 4.7e-64 249.6 262 56.9
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 1.1e-63 248.4 253 55.3
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 1.1e-63 248.4 262 55.3
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 1.4e-63 248.1 251 52.6
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 1.4e-63 248.1 264 55.3
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 1.4e-63 248.1 274 52.9
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 1.8e-63 247.7 261 56.7
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 1.8e-63 247.7 261 56.7
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 1.8e-63 247.7 244 59.0
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 1.8e-63 247.7 261 53.6
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 2.3e-63 247.3 181 70.2
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 2.3e-63 247.3 267 52.1
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 3.1e-63 246.9 268 52.2
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 8.9e-63 245.4 261 56.3
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 8.9e-63 245.4 227 58.1
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 1.2e-62 245.0 260 55.8
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 1.2e-62 245.0 251 53.8
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 2.6e-62 243.8 260 55.8
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 3.4e-62 243.4 254 56.7
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 4.4e-62 243.0 273 53.5
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 4.4e-62 243.0 251 56.6
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 5.8e-62 242.7 260 55.4
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 5.8e-62 242.7 265 54.7
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 1.3e-61 241.5 280 51.1
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 1.3e-61 241.5 187 68.4
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 2.2e-61 240.7 251 53.4
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 2.2e-61 240.7 248 55.2
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 3.7e-61 240.0 167 71.9
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 4.9e-61 239.6 265 52.8
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 6.4e-61 239.2 282 49.3
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 8.3e-61 238.8 251 55.4
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 8.3e-61 238.8 251 55.4
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 1.4e-60 238.0 273 52.4
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 3.2e-60 236.9 248 54.0
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 3.2e-60 236.9 261 55.9
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 4.1e-60 236.5 272 51.5
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 9.2e-60 235.3 261 53.3
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 1.2e-59 235.0 258 51.6
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 2.1e-59 234.2 270 51.5
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 2.1e-59 234.2 278 51.4
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 2.7e-59 233.8 266 53.4
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 3.5e-59 233.4 280 51.1
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 7.8e-59 232.3 215 58.1
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 1.3e-58 231.5 247 54.7
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 3.9e-58 229.9 178 62.9
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 8.6e-58 228.8 272 50.0
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.6e-56 224.6 246 53.3
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.8e-56 223.8 255 52.2
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 2.8e-56 223.8 221 56.6
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 3.1e-55 220.3 139 74.1
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 2.0e-54 217.6 178 61.8
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 3.4e-54 216.9 251 49.8
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 9.9e-54 215.3 139 71.2
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 2.1e-51 207.6 260 50.0
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 6.6e-50 202.6 145 66.2
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.5e-49 201.4 145 65.5
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 1.2e-48 198.4 145 64.1
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 1.8e-47 194.5 170 58.8
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 8.9e-47 192.2 259 45.6
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 5.8e-46 189.5 149 60.4
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 2.9e-45 187.2 148 59.5
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 5.8e-38 162.9 248 44.4
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 1.7e-37 161.4 127 60.6
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 3.5e-35 153.7 110 63.6
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 3.1e-31 140.6 188 44.7
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 2.2e-29 134.4 169 42.0
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 2.9e-29 134.0 110 60.0
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.1e-28 132.1 116 62.1
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 2.7e-27 127.5 167 44.3
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.3e-26 124.4 80 73.8
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.5e-25 120.9 80 71.2
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 1.6e-24 118.2 169 45.0
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 6.7e-18 96.3 188 38.3
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 5.7e-17 93.2 125 37.6
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 8.2e-16 89.4 122 39.3
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 6.1e-11 73.2 114 33.3
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 1.9e-09 68.2 33 90.9


User provided reference genes

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