Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 6.9e-142 507.3 256 100.0
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 2.0e-117 426.0 257 86.8
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 4.5e-117 424.9 254 85.0
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 5.7e-104 381.3 256 77.3
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 6.3e-103 377.9 261 75.9
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 8.2e-103 377.5 262 76.0
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 1.8e-102 376.3 261 75.1
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 1.3e-95 353.6 249 71.5
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 3.7e-95 352.1 253 70.4
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 4.5e-93 345.1 256 69.9
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.0e-89 334.0 260 68.1
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 1.1e-86 323.9 254 65.4
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 3.1e-86 322.4 252 67.1
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 9.2e-86 320.9 252 65.9
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 3.5e-85 318.9 240 68.3
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 4.5e-85 318.5 252 65.5
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.3e-84 316.2 251 66.9
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 5.0e-84 315.1 251 65.3
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 5.0e-84 315.1 251 65.3
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.5e-83 313.5 242 66.5
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 9.5e-83 310.8 251 65.3
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 2.1e-82 309.7 257 65.0
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 3.6e-82 308.9 234 67.1
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 3.6e-82 308.9 285 58.2
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 4.7e-82 308.5 240 65.8
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 6.1e-82 308.1 238 65.5
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.8e-81 306.6 261 62.8
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.3e-81 306.2 239 68.2
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 2.3e-81 306.2 264 62.1
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 3.0e-81 305.8 252 62.7
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 4.0e-81 305.4 235 66.4
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 5.2e-81 305.1 249 65.9
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 6.8e-81 304.7 261 60.2
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 2.6e-80 302.8 252 63.9
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 2.6e-80 302.8 248 63.3
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 4.4e-80 302.0 219 69.4
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 4.4e-80 302.0 252 62.7
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 4.4e-80 302.0 249 63.5
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 5.8e-80 301.6 253 63.6
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 5.8e-80 301.6 253 63.6
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 1.3e-79 300.4 251 62.9
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 2.2e-79 299.7 237 63.7
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 6.4e-79 298.1 242 64.0
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 1.4e-78 297.0 258 62.0
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 3.2e-78 295.8 259 61.4
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 7.0e-78 294.7 261 59.4
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 7.0e-78 294.7 260 58.1
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 1.2e-77 293.9 261 58.6
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 4.6e-77 292.0 224 65.6
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 7.8e-77 291.2 258 61.6
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 7.8e-77 291.2 248 60.9
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 7.8e-77 291.2 260 57.7
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.0e-76 290.8 248 60.9
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 1.7e-76 290.0 248 60.9
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 2.3e-76 289.7 250 60.0
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 3.0e-76 289.3 256 59.4
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.0e-76 289.3 246 61.0
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 3.0e-76 289.3 249 61.8
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 2.1e-74 283.1 252 58.3
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 2.1e-74 283.1 206 67.5
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 3.6e-74 282.3 239 60.3
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.1e-73 280.8 248 62.1
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 1.4e-73 280.4 344 47.7
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 4.0e-73 278.9 209 64.6
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 5.2e-73 278.5 225 65.3
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 6.8e-73 278.1 273 55.7
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 6.8e-73 278.1 248 59.3
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.5e-72 276.9 274 55.1
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 3.4e-72 275.8 235 61.3
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 5.8e-72 275.0 241 62.2
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 7.5e-72 274.6 240 59.2
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 9.8e-72 274.2 247 58.7
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 2.2e-71 273.1 248 58.9
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 2.9e-71 272.7 231 63.6
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 6.4e-71 271.6 247 56.7
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 8.3e-71 271.2 259 57.9
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 1.9e-70 270.0 239 59.8
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 3.2e-70 269.2 248 58.1
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 3.5e-69 265.8 228 58.8
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 4.6e-69 265.4 307 50.5
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 3.9e-68 262.3 257 55.6
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 6.6e-68 261.5 249 56.6
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 4.7e-66 255.4 194 62.9
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 1.1e-65 254.2 252 54.8
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 5.2e-65 251.9 262 52.7
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 2.0e-64 250.0 235 55.3
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 4.4e-64 248.8 262 55.7
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 5.8e-64 248.4 223 57.4
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.1e-62 244.2 287 50.9
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 3.2e-62 242.7 260 51.9
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 1.6e-61 240.4 252 50.8
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 2.1e-61 240.0 250 52.4
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 2.1e-61 240.0 250 52.4
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 1.5e-59 233.8 175 62.9
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 8.9e-57 224.6 244 50.0
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 2.6e-56 223.0 218 58.7
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 7.6e-56 221.5 428 36.0
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 9.9e-56 221.1 260 50.8
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 3.5e-45 186.0 134 63.4
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 3.9e-44 182.6 94 91.5
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 6.2e-42 175.3 258 45.0
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 5.3e-41 172.2 158 54.4
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 5.8e-40 168.7 222 42.3
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 5.1e-36 155.6 156 58.3
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 4.5e-32 142.5 227 36.6
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 6.7e-28 128.6 258 38.4
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.5e-27 126.7 97 59.8
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 4.3e-27 125.9 119 61.3
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.0e-24 117.1 132 49.2
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.5e-19 100.1 247 31.2
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.3e-18 97.8 243 29.6
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 6.3e-18 95.5 105 54.3
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.4e-17 94.4 122 51.6
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.3e-15 87.8 95 44.2
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 3.8e-15 86.3 168 35.1
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.4e-14 84.3 131 38.2
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.6e-13 80.9 119 45.4
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.3e-12 77.0 84 54.8
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 3.9e-12 76.3 86 51.2
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 4.1e-09 66.2 52 50.0
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 9.1e-09 65.1 167 26.9


User provided reference genes

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