Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08267_v3 Cicer arietinum L. HOM05D004151 ORTHO05D004775 5.4e-48 194.5 117 100.0
Lalb_Chr14g0364491 Lupinus albus HOM05D004151 ORTHO05D004775 1.5e-45 186.4 90 96.7
Phvul.001G110400 Phaseolus vulgaris HOM05D004151 ORTHO05D004775 1.5e-45 186.4 90 96.7
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea HOM05D004151 ORTHO05D004775 1.9e-45 186.0 90 96.7
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea HOM05D004151 ORTHO05D004775 1.9e-45 186.0 90 96.7
VMungo1383G2477 Vigna mungo HOM05D004151 ORTHO05D004775 2.5e-45 185.7 90 95.6
Medtr7g085640 Medicago truncatula HOM05D004151 ORTHO05D004775 3.3e-45 185.3 117 89.7
Lalb_Chr22g0359191 Lupinus albus HOM05D004151 ORTHO05D004775 9.6e-45 183.7 90 94.4
Lj1g0021266 Lotus japonicus HOM05D004151 ORTHO05D004775 2.1e-44 182.6 117 86.3
TPR.G5895 Trifolium pratense HOM05D004151 ORTHO05D004775 2.1e-44 182.6 87 98.9
Psat0s1971g0280 Pisum sativum HOM05D004151 ORTHO05D004775 4.7e-44 181.4 90 94.4
TAR369G0512 Trochodendron aralioides HOM05D004151 ORTHO05D004775 6.2e-44 181.0 90 93.3
Dinv14579 Davidia involucrata HOM05D004151 ORTHO05D004775 1.8e-43 179.5 90 93.3
Glyma.16G041400 Glycine max HOM05D004151 ORTHO05D004775 3.1e-43 178.7 87 94.3
Glyma.19G110900 Glycine max HOM05D004151 ORTHO05D004775 3.1e-43 178.7 87 94.3
Nitab4.5_0009048g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 4.0e-43 178.3 115 90.4
Cc06_g22960 Coffea canephora HOM05D004151 ORTHO05D004775 5.2e-43 177.9 90 92.2
Nn7g35851 Nelumbo nucifera HOM05D004151 ORTHO05D004775 5.2e-43 177.9 90 91.1
Manes.08G144000 Manihot esculenta HOM05D004151 ORTHO05D004775 6.9e-43 177.6 89 93.3
Manes.09G141400 Manihot esculenta HOM05D004151 ORTHO05D004775 6.9e-43 177.6 89 93.3
Nitab4.5_0007542g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.2e-42 176.8 89 92.1
Sed0025621 Sechium edule HOM05D004151 ORTHO05D004775 1.2e-42 176.8 118 74.6
THA.LOC104827273 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 1.2e-42 176.8 90 92.2
CAN.G960.49 Capsicum annuum HOM05D004151 ORTHO05D004775 1.5e-42 176.4 89 93.3
CDE06G0359 Ceratophyllum demersum HOM05D004151 ORTHO05D004775 1.5e-42 176.4 89 91.0
QL07p019530 Quercus lobata HOM05D004151 ORTHO05D004775 1.5e-42 176.4 113 91.2
Thecc.05G294500 Theobroma cacao HOM05D004151 ORTHO05D004775 1.5e-42 176.4 90 90.0
CiPaw.09G001900 Carya illinoinensis HOM05D004151 ORTHO05D004775 2.0e-42 176.0 89 92.1
Aa31LG11G11430 Aethionema arabicum HOM05D004151 ORTHO05D004775 2.6e-42 175.6 113 85.8
CANSAT78G0749 Cannabis sativa HOM05D004151 ORTHO05D004775 3.4e-42 175.3 117 80.3
Sabra13G0051900 Salix brachista HOM05D004151 ORTHO05D004775 3.4e-42 175.3 90 90.0
SGA_v2.0_scaffold274G46513 Striga asiatica HOM05D004151 ORTHO05D004775 3.4e-42 175.3 90 90.0
TWI32G1207 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 4.4e-42 174.9 90 91.1
Actinidia22083 Actinidia chinensis HOM05D004151 ORTHO05D004775 7.6e-42 174.1 86 94.2
ClCG04G005310 Citrullus lanatus HOM05D004151 ORTHO05D004775 7.6e-42 174.1 86 94.2
MELO3C008801.2 Cucumis melo HOM05D004151 ORTHO05D004775 7.6e-42 174.1 86 94.2
CsaV3_4G013280 Cucumis sativus L. HOM05D004151 ORTHO05D004775 7.6e-42 174.1 86 94.2
Solyc10g078540.3 Solanum lycopersicum HOM05D004151 ORTHO05D004775 7.6e-42 174.1 89 92.1
Sopen10g029190 Solanum pennellii HOM05D004151 ORTHO05D004775 7.6e-42 174.1 89 92.1
CSS0045523 Camellia sinensis var. sinensis HOM05D004151 ORTHO05D004775 9.9e-42 173.7 119 84.9
Duzib106G1401 Durio zibethinus HOM05D004151 ORTHO05D004775 9.9e-42 173.7 90 90.0
Oeu059999.1 Olea europaea HOM05D004151 ORTHO05D004775 9.9e-42 173.7 90 88.9
Potri.013G058400 Populus trichocarpa HOM05D004151 ORTHO05D004775 9.9e-42 173.7 90 90.0
Os11g0579800 Oryza sativa ssp. japonica HOM05D004151 ORTHO05D004775 1.3e-41 173.3 90 87.8
Hund24835 Selenicereus undatus HOM05D004151 ORTHO05D004775 1.3e-41 173.3 119 86.6
HPP92_021240 Vanilla planifolia HOM05D004151 ORTHO05D004775 1.3e-41 173.3 90 88.9
Cpa.g.sc51.114 Carica papaya HOM05D004151 ORTHO05D004775 1.7e-41 172.9 86 93.0
Sed0023399 Sechium edule HOM05D004151 ORTHO05D004775 1.7e-41 172.9 90 90.0
PGSC0003DMG400008366 Solanum tuberosum HOM05D004151 ORTHO05D004775 1.7e-41 172.9 89 91.0
Peaxi162Scf00003g04832 Petunia axillaris HOM05D004151 ORTHO05D004775 2.2e-41 172.6 89 91.0
Ah.06g191800 Amaranthus hybridus HOM05D004151 ORTHO05D004775 2.9e-41 172.2 89 88.8
MSTRG.19934 Avicennia marina HOM05D004151 ORTHO05D004775 3.8e-41 171.8 88 88.6
Gohir.A11G296500 Gossypium hirsutum HOM05D004151 ORTHO05D004775 3.8e-41 171.8 88 90.9
Gohir.D11G310400 Gossypium hirsutum HOM05D004151 ORTHO05D004775 3.8e-41 171.8 88 90.9
Gorai.007G343400 Gossypium raimondii HOM05D004151 ORTHO05D004775 3.8e-41 171.8 88 90.9
PGR142G1491 Punica granatum HOM05D004151 ORTHO05D004775 3.8e-41 171.8 113 89.4
Zm00001eb114360 Zea mays HOM05D004151 ORTHO05D004775 4.9e-41 171.4 88 86.4
Gohir.A08G213200 Gossypium hirsutum HOM05D004151 ORTHO05D004775 6.4e-41 171.0 88 90.9
Gohir.D08G230300 Gossypium hirsutum HOM05D004151 ORTHO05D004775 6.4e-41 171.0 88 90.9
Gorai.004G244500 Gossypium raimondii HOM05D004151 ORTHO05D004775 6.4e-41 171.0 88 90.9
Lsat_1_v5_gn_8_24760 Lactuca sativa HOM05D004151 ORTHO05D004775 6.4e-41 171.0 90 90.0
Atru.chr5.2062 Acer truncatum HOM05D004151 ORTHO05D004775 8.4e-41 170.6 118 83.1
Ah.13g075350 Amaranthus hybridus HOM05D004151 ORTHO05D004775 8.4e-41 170.6 89 87.6
Dinv37014 Davidia involucrata HOM05D004151 ORTHO05D004775 1.1e-40 170.2 119 82.4
FvH4_1g30320 Fragaria vesca HOM05D004151 ORTHO05D004775 1.1e-40 170.2 89 88.8
FAN19G1796 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.1e-40 170.2 89 88.8
FAN26G2823 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.1e-40 170.2 89 88.8
RcHm_v2.0_Chr3g0490211 Rosa chinensis HOM05D004151 ORTHO05D004775 1.1e-40 170.2 89 88.8
TWI34G0161 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 1.1e-40 170.2 90 88.9
Migut.J01888 Erythranthe guttata HOM05D004151 ORTHO05D004775 1.4e-40 169.9 90 87.8
Lsat_1_v5_gn_8_145841 Lactuca sativa HOM05D004151 ORTHO05D004775 1.4e-40 169.9 85 91.8
Potri.019G034900 Populus trichocarpa HOM05D004151 ORTHO05D004775 1.4e-40 169.9 89 88.8
THA.LOC104802867 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 1.4e-40 169.9 90 87.8
Aa31LG5G14500 Aethionema arabicum HOM05D004151 ORTHO05D004775 1.9e-40 169.5 90 87.8
vmacro09141 Vaccinium macrocarpon HOM05D004151 ORTHO05D004775 1.9e-40 169.5 90 85.6
Zm00001eb200450 Zea mays HOM05D004151 ORTHO05D004775 1.9e-40 169.5 88 85.2
Cfa016441 Carpinus fangiana HOM05D004151 ORTHO05D004775 3.2e-40 168.7 89 88.8
Haze_19418 Corylus avellana HOM05D004151 ORTHO05D004775 3.2e-40 168.7 89 88.8
Haze_19447 Corylus avellana HOM05D004151 ORTHO05D004775 3.2e-40 168.7 89 88.8
HanXRQChr08g0216931 Helianthus annuus HOM05D004151 ORTHO05D004775 3.2e-40 168.7 85 90.6
GSVIVG01033401001 Vitis vinifera HOM05D004151 ORTHO05D004775 3.2e-40 168.7 89 87.6
CARHR194880 Cardamine hirsuta HOM05D004151 ORTHO05D004775 4.2e-40 168.3 87 88.5
Oeu049600.1 Olea europaea HOM05D004151 ORTHO05D004775 4.2e-40 168.3 118 82.2
Duzib177G0709 Durio zibethinus HOM05D004151 ORTHO05D004775 5.4e-40 167.9 90 87.8
FAN23G0170 Fragaria x ananassa HOM05D004151 ORTHO05D004775 5.4e-40 167.9 89 87.6
HanXRQChr07g0204461 Helianthus annuus HOM05D004151 ORTHO05D004775 5.4e-40 167.9 87 87.4
Sp6g26140 Schrenkiella parvula HOM05D004151 ORTHO05D004775 5.4e-40 167.9 90 86.7
Thhalv10014755m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 9.3e-40 167.2 90 86.7
unitig_21.g20195 Utricularia gibba HOM05D004151 ORTHO05D004775 9.3e-40 167.2 90 84.4
Atru.chr5.2060 Acer truncatum HOM05D004151 ORTHO05D004775 1.2e-39 166.8 118 82.2
Sp3g02890 Schrenkiella parvula HOM05D004151 ORTHO05D004775 1.2e-39 166.8 90 85.6
Thhalv10021561m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 1.6e-39 166.4 90 85.6
Aqoxy1G00486 Aquilegia oxysepala HOM05D004151 ORTHO05D004775 2.1e-39 166.0 90 87.8
Peaxi162Scf00076g01048 Petunia axillaris HOM05D004151 ORTHO05D004775 2.1e-39 166.0 84 92.9
Sc25g0004980 Simmondsia chinensis HOM05D004151 ORTHO05D004775 2.1e-39 166.0 89 87.6
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla HOM05D004151 ORTHO05D004775 3.5e-39 165.2 84 90.5
MD05G1045500 Malus domestica HOM05D004151 ORTHO05D004775 3.5e-39 165.2 89 86.5
EL10Ac3g06820 Beta vulgaris HOM05D004151 ORTHO05D004775 4.6e-39 164.9 89 86.5
CARHR078040 Cardamine hirsuta HOM05D004151 ORTHO05D004775 6.0e-39 164.5 90 83.3
AT3G03920 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 7.8e-39 164.1 90 85.6
Carub.0003s0316 Capsella rubella HOM05D004151 ORTHO05D004775 7.8e-39 164.1 90 84.4
Prupe.8G064800 Prunus persica HOM05D004151 ORTHO05D004775 1.0e-38 163.7 90 86.7
COL.COLO4_13597 Corchorus olitorius HOM05D004151 ORTHO05D004775 1.3e-38 163.3 84 89.3
FAN28G2413 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.3e-38 163.3 84 89.3
Nitab4.5_0004844g0050 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.3e-38 163.3 84 90.5
BcaNung05745 Brassica carinata HOM05D004151 ORTHO05D004775 1.7e-38 162.9 90 84.4
A01p41270 Brassica napus HOM05D004151 ORTHO05D004775 1.7e-38 162.9 90 84.4
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus HOM05D004151 ORTHO05D004775 1.7e-38 162.9 90 84.4
BraA01t04550Z Brassica rapa HOM05D004151 ORTHO05D004775 1.7e-38 162.9 90 84.4
SalBow5G4201 Salvia bowleyana HOM05D004151 ORTHO05D004775 1.7e-38 162.9 84 89.3
AL3G13810 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 2.3e-38 162.5 90 84.4
BolC1t05799H Brassica oleracea HOM05D004151 ORTHO05D004775 2.3e-38 162.5 90 84.4
Carub.0006s1646 Capsella rubella HOM05D004151 ORTHO05D004775 2.3e-38 162.5 87 85.1
ECA233G5487 Erigeron canadensis HOM05D004151 ORTHO05D004775 2.3e-38 162.5 89 84.3
PSO063G0165 Papaver somniferum HOM05D004151 ORTHO05D004775 3.0e-38 162.2 89 84.3
PSO384G0229 Papaver somniferum HOM05D004151 ORTHO05D004775 3.0e-38 162.2 91 84.6
MD00G1189600 Malus domestica HOM05D004151 ORTHO05D004775 3.9e-38 161.8 89 85.4
PSO339G5713 Papaver somniferum HOM05D004151 ORTHO05D004775 3.9e-38 161.8 88 84.1
BcaC03g13582 Brassica carinata HOM05D004151 ORTHO05D004775 5.1e-38 161.4 87 87.4
BcaNung05743 Brassica carinata HOM05D004151 ORTHO05D004775 5.1e-38 161.4 90 83.3
BolC2t06882H Brassica oleracea HOM05D004151 ORTHO05D004775 5.1e-38 161.4 87 87.4
SEGI_32651 Sequoiadendron giganteum HOM05D004151 ORTHO05D004775 5.1e-38 161.4 90 77.8
ATR0697G007 Amborella trichopoda HOM05D004151 ORTHO05D004775 6.6e-38 161.0 83 88.0
AUR62032690 Chenopodium quinoa HOM05D004151 ORTHO05D004775 8.7e-38 160.6 84 86.9
BcaB01g05179 Brassica carinata HOM05D004151 ORTHO05D004775 1.1e-37 160.2 90 82.2
C02p09730 Brassica napus HOM05D004151 ORTHO05D004775 1.1e-37 160.2 87 86.2
C03p10140 Brassica napus HOM05D004151 ORTHO05D004775 1.1e-37 160.2 90 82.2
BolC3t13499H Brassica oleracea HOM05D004151 ORTHO05D004775 1.1e-37 160.2 90 82.2
BraA03t10192Z Brassica rapa HOM05D004151 ORTHO05D004775 1.1e-37 160.2 90 82.2
Mapoly0086s0024 Marchantia polymorpha HOM05D004151 ORTHO05D004775 1.1e-37 160.2 89 80.9
Sabra19G0042500 Salix brachista HOM05D004151 ORTHO05D004775 1.1e-37 160.2 84 89.3
Sabra19G0044800 Salix brachista HOM05D004151 ORTHO05D004775 1.1e-37 160.2 84 89.3
Hund19236 Selenicereus undatus HOM05D004151 ORTHO05D004775 1.5e-37 159.8 89 83.1
A03p08690 Brassica napus HOM05D004151 ORTHO05D004775 1.9e-37 159.5 87 85.1
PSO782G4796 Papaver somniferum HOM05D004151 ORTHO05D004775 1.9e-37 159.5 89 83.1
Pp3c25_15020 Physcomitrium patens HOM05D004151 ORTHO05D004775 3.3e-37 158.7 90 77.8
Pp3c5_28430 Physcomitrium patens HOM05D004151 ORTHO05D004775 5.6e-37 157.9 90 77.8
Rhsim04G0087500 Rhododendron simsii HOM05D004151 ORTHO05D004775 5.6e-37 157.9 84 85.7
A02p04770 Brassica napus HOM05D004151 ORTHO05D004775 9.6e-37 157.1 90 82.2
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis HOM05D004151 ORTHO05D004775 1.3e-36 156.8 90 74.4
CBR_g48747 Chara braunii HOM05D004151 ORTHO05D004775 3.6e-36 155.2 86 81.4
AT5G18180 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 6.2e-36 154.5 87 82.8
BraA02t05436Z Brassica rapa HOM05D004151 ORTHO05D004775 8.1e-36 154.1 87 82.8
AL6G29380 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 1.4e-35 153.3 87 81.6
BcaB05g23300 Brassica carinata HOM05D004151 ORTHO05D004775 3.1e-35 152.1 87 81.6
COL.COLO4_13598 Corchorus olitorius HOM05D004151 ORTHO05D004775 6.9e-35 151.0 84 84.5
Cre13.g567850 Chlamydomonas reinhardtii HOM05D004151 ORTHO05D004775 2.0e-34 149.4 84 78.6
Nitab4.5_0002769g0090 Nicotiana tabacum HOM05D004151 ORTHO05D004775 3.0e-30 135.6 89 75.3
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 1.6e-28 129.8 65 90.8
MCO13G219 Micromonas commoda HOM05D004151 ORTHO05D004775 2.8e-28 129.0 80 70.0
C09p58800 Brassica napus HOM05D004151 ORTHO05D004775 8.1e-28 127.5 70 82.9
BolC2t11912H Brassica oleracea HOM05D004151 ORTHO05D004775 2.6e-26 122.5 103 63.1
BraA10t42874Z Brassica rapa HOM05D004151 ORTHO05D004775 2.9e-25 119.0 70 82.9
SMO347G0554 Selaginella moellendorffii HOM05D004151 ORTHO05D004775 2.9e-25 119.0 113 66.4
Actinidia30553 Actinidia chinensis HOM05D004151 ORTHO05D004775 1.9e-24 116.3 58 96.6
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 2.3e-22 109.4 64 71.9
Haze_27090 Corylus avellana HOM05D000590 ORTHO05D004775 3.4e-18 95.5 83 50.6
unitig_744.g24550 Utricularia gibba HOM05D004151 ORTHO05D004775 7.6e-18 94.4 45 93.3
C02p58510 Brassica napus HOM05D004151 ORTHO05D004775 8.4e-17 90.9 69 62.3
Zm00001eb274230 Zea mays HOM05D004151 ORTHO05D004775 5.5e-16 88.2 45 82.2
HanXRQChr05g0143841 Helianthus annuus HOM05D004151 ORTHO05D004775 1.6e-12 76.6 87 46.0
BcaB08g36698 Brassica carinata HOM05D004151 ORTHO05D004775 6.3e-12 74.7 44 81.8
Oeu035720.1 Olea europaea HOM05D004151 ORTHO05D004775 1.5e-10 70.1 44 72.7
Oeu035726.1 Olea europaea HOM05D004151 ORTHO05D004775 5.9e-10 68.2 44 72.7
BolC9t58722H Brassica oleracea HOM05D004151 ORTHO05D004775 2.9e-09 65.9 37 81.1
ECA246G0128 Erigeron canadensis HOM05D001659 ORTHO05D001659 1.6e-07 60.1 35 74.3


User provided reference genes

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