Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04546_v3 Cicer arietinum L. HOM05D004944 ORTHO05D005989 2.4e-240 835.1 419 100.0
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 1.9e-152 543.1 403 72.2
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 1.0e-150 537.3 403 72.7
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 3.3e-149 532.3 412 70.4
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 2.6e-138 496.1 409 66.3
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 1.7e-129 466.8 403 64.0
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 2.1e-127 459.9 403 62.5
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 4.3e-125 452.2 403 62.8
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 3.2e-120 436.0 428 58.4
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 2.8e-116 422.9 411 58.2
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 1.3e-108 397.5 298 70.5
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 2.9e-89 333.2 428 48.8
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 2.7e-87 326.6 425 47.5
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 2.3e-86 323.6 419 47.7
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 1.5e-85 320.9 443 45.1
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 9.7e-85 318.2 402 47.8
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 1.7e-84 317.4 419 48.0
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 2.8e-84 316.6 425 47.5
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 1.6e-82 310.8 404 46.3
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 3.5e-82 309.7 434 45.9
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 5.9e-82 308.9 406 46.8
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 1.0e-81 308.1 405 44.9
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 1.3e-81 307.8 404 46.8
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 2.9e-81 306.6 418 46.2
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 5.0e-81 305.8 343 51.0
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 5.5e-80 302.4 425 45.2
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 5.5e-80 302.4 417 46.5
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 7.2e-80 302.0 417 46.5
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 4.7e-79 299.3 423 43.7
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 8.0e-79 298.5 405 44.0
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 1.0e-78 298.1 436 43.8
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 3.0e-78 296.6 405 44.0
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 5.2e-78 295.8 405 44.2
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 8.8e-78 295.0 451 43.0
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 2.6e-77 293.5 403 44.4
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 3.7e-76 289.7 311 52.7
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 3.7e-76 289.7 379 46.2
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 1.4e-75 287.7 437 43.0
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 3.1e-75 286.6 473 41.0
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 5.3e-75 285.8 482 40.5
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 7.0e-75 285.4 408 43.6
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 9.1e-75 285.0 408 43.1
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 8.5e-73 278.5 441 41.5
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 3.2e-72 276.6 439 41.7
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 4.2e-72 276.2 439 41.7
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 5.5e-72 275.8 420 42.1
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 9.4e-72 275.0 404 43.1
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 1.6e-71 274.2 427 41.5
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 8.0e-71 271.9 361 45.7
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 3.0e-70 270.0 402 42.3
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.6e-69 266.9 425 41.4
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 3.4e-69 266.5 352 44.6
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 5.7e-69 265.8 412 40.3
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 1.2e-66 258.1 421 41.1
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 2.3e-65 253.8 493 37.1
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 5.0e-65 252.7 449 38.8
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 6.5e-65 252.3 403 41.7
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 6.5e-65 252.3 357 44.0
vmacro13722 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 7.2e-64 248.8 430 39.5
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 9.5e-64 248.4 347 44.4
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 1.7e-60 237.7 370 40.3
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 4.1e-59 233.0 353 43.6
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 1.6e-58 231.1 419 38.4
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.0e-57 228.4 416 38.0
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 8.6e-57 225.3 416 37.3
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 9.5e-56 221.9 416 36.8
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 8.0e-55 218.8 341 39.9
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 1.4e-54 218.0 430 37.2
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 1.4e-54 218.0 432 36.1
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 1.4e-54 218.0 432 36.1
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 1.4e-54 218.0 432 36.1
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 2.3e-54 217.2 304 43.4
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 4.0e-54 216.5 410 37.1
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 4.0e-54 216.5 414 36.0
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 5.2e-54 216.1 417 35.5
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 6.8e-54 215.7 410 36.8
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 6.8e-54 215.7 418 36.4
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 3.4e-53 213.4 349 39.3
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 7.0e-51 205.7 413 37.8
FAN10G4268 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.6e-50 204.5 308 43.8
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 1.3e-49 201.4 412 37.4
Peaxi162Scf00309g00015 Petunia axillaris HOM05D004944 ORTHO05D005989 3.0e-49 200.3 537 31.5
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 1.6e-47 194.5 292 42.8
Lj9A645G78 Lonicera japonica HOM05D004944 ORTHO05D005989 3.7e-44 183.3 264 46.6
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 1.9e-43 181.0 190 51.6
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 4.1e-43 179.9 302 38.7
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 2.1e-42 177.6 292 41.1
CSS0031841 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 3.0e-41 173.7 174 55.7
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 2.8e-39 167.2 252 41.7
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 4.0e-38 163.3 306 38.2
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 1.2e-37 161.8 299 36.8
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 2.0e-37 161.0 319 37.9
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 2.0e-37 161.0 297 36.7
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 3.4e-37 160.2 187 48.1
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 4.4e-37 159.8 338 33.4
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 1.1e-35 155.2 267 39.0
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 6.0e-34 149.4 261 39.5
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 7.8e-34 149.1 495 27.1
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 2.3e-33 147.5 299 37.1
Psat5g213600 Pisum sativum HOM05D004944 ORTHO05D005989 6.6e-33 146.0 173 51.4
ATR0721G017 Amborella trichopoda HOM05D004944 ORTHO05D005989 9.5e-32 142.1 315 33.7
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 2.1e-31 141.0 307 34.9
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 2.1e-31 141.0 415 29.4
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 8.9e-30 135.6 195 42.1
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 8.4e-28 129.0 244 37.3
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 1.4e-27 128.3 286 36.4
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.7e-25 121.3 271 32.8
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 6.6e-25 119.4 231 38.1
Sp5g22360 Schrenkiella parvula HOM05D004944 ORTHO05D005989 1.5e-21 108.2 125 49.6
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 1.3e-20 105.1 171 38.0
FAN01G1245 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.3e-20 105.1 180 42.2
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 2.9e-20 104.0 340 29.1
SHI03969 Sapria himalayana HOM05D004944 ORTHO05D005989 6.4e-20 102.8 163 42.3
Lj9A645G77 Lonicera japonica HOM05D004944 ORTHO05D005989 1.9e-16 91.3 146 38.4
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 2.8e-15 87.4 200 32.0
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 2.4e-14 84.3 87 52.9
Lalb_Chr04g0263911 Lupinus albus HOM05D004944 ORTHO05D005989 1.2e-13 82.0 68 60.3
RcHm_v2.0_Chr4g0391951 Rosa chinensis HOM05D004944 ORTHO05D005989 2.2e-12 77.8 139 39.6
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 9.3e-11 72.4 90 44.4
RcHm_v2.0_Chr2g0114761 Rosa chinensis HOM05D004944 ORTHO05D005989 1.3e-09 68.6 112 41.1
RcHm_v2.0_Chr5g0078731 Rosa chinensis HOM05D004944 ORTHO05D005989 1.3e-09 68.6 107 42.1
SHI03965 Sapria himalayana HOM05D004944 ORTHO05D005989 2.1e-07 61.2 48 64.6
Sp5g22380 Schrenkiella parvula HOM05D004944 ORTHO05D005989 1.1e-06 58.9 48 52.1


User provided reference genes

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