Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_03752_v3 Cicer arietinum L. HOM05D003208 ORTHO05D015518 3.3e-102 375.2 208 100.0
Ca_04837_v3 Cicer arietinum L. HOM05D003208 ORTHO05D015518 1.6e-80 303.1 183 86.3
Ca_17757_v3 Cicer arietinum L. HOM05D003208 ORTHO05D004103 6.8e-63 244.6 198 70.2
Ca_30950_v3 Cicer arietinum L. HOM05D003208 ORTHO05D015518 1.6e-59 233.4 163 78.5
Ca_27302_v3 Cicer arietinum L. HOM05D003208 ORTHO05D015518 3.1e-55 219.2 158 76.6
Medtr8g089980 Medicago truncatula HOM05D003208 ORTHO05D004103 8.6e-50 201.1 190 63.7
Psat7g057040 Pisum sativum HOM05D003208 ORTHO05D004103 2.1e-43 179.9 201 56.2
TPR.G6241 Trifolium pratense HOM05D003208 ORTHO05D004103 5.1e-42 175.3 201 54.7
Psat4g135880 Pisum sativum HOM05D001082 ORTHO05D005120 4.0e-39 165.6 184 57.1
Glyma.08G133700 Glycine max HOM05D003208 ORTHO05D004103 7.5e-38 161.4 201 49.8
Lalb_Chr13g0295911 Lupinus albus HOM05D003208 ORTHO05D004103 7.5e-38 161.4 199 48.7
Glyma.05G176233 Glycine max HOM05D003208 ORTHO05D004103 8.3e-37 157.9 197 50.8
Ca_07080_v3 Cicer arietinum L. HOM05D000036 ORTHO05D015518 1.4e-36 157.1 96 89.6
Lj4g0011115 Lotus japonicus HOM05D003208 ORTHO05D004103 1.6e-35 153.7 200 50.0
Lalb_Chr07g0185301 Lupinus albus HOM05D003208 ORTHO05D004103 4.3e-33 145.6 200 46.0
VMungo0251G3398 Vigna mungo HOM05D003208 ORTHO05D004103 4.4e-30 135.6 207 42.0
arahy.Tifrunner.gnm1.ann1.56KYQ9 Arachis hypogaea HOM05D003208 ORTHO05D004103 2.1e-27 126.7 200 42.5
Phvul.002G261300 Phaseolus vulgaris HOM05D003208 ORTHO05D004103 2.7e-27 126.3 223 40.4
arahy.Tifrunner.gnm1.ann1.G6ARYH Arachis hypogaea HOM05D003208 ORTHO05D004103 3.5e-27 125.9 200 42.5
TPR.G15995 Trifolium pratense HOM05D003208 ORTHO05D004103 2.3e-26 123.2 200 43.0
Ca_07084_v3 Cicer arietinum L. HOM05D000036 ORTHO05D015518 5.6e-25 118.6 68 92.6
Glyma.11G241400 Glycine max HOM05D003208 ORTHO05D004103 6.2e-24 115.2 204 41.7
Lj6g0024442 Lotus japonicus HOM05D003208 ORTHO05D004103 6.9e-23 111.7 202 38.6
Psat5g090760 Pisum sativum HOM05D003208 ORTHO05D004103 6.9e-23 111.7 202 40.1
Medtr3g086950 Medicago truncatula HOM05D003208 ORTHO05D004103 1.2e-22 110.9 199 38.7
Ca_13617_v3 Cicer arietinum L. HOM05D000036 ORTHO05D015518 7.6e-22 108.2 80 75.0
Lalb_Chr23g0277521 Lupinus albus HOM05D003208 ORTHO05D004103 1.3e-21 107.5 203 39.9
VMungo1383G1326 Vigna mungo HOM05D003208 ORTHO05D004103 1.4e-20 104.0 200 39.0
Psat4g135800 Pisum sativum HOM05D003208 ORTHO05D015518 1.3e-18 97.4 95 60.0
Ca_16514_v3 Cicer arietinum L. HOM05D003208 ORTHO05D004103 1.9e-17 93.6 199 35.2
Phvul.001G253400 Phaseolus vulgaris HOM05D003208 ORTHO05D004103 3.3e-17 92.8 210 34.8
QL06p048297 Quercus lobata HOM05D003208 ORTHO05D004103 1.7e-13 80.5 206 33.0
Psat7g145480 Pisum sativum HOM05D003208 ORTHO05D004103 2.9e-13 79.7 120 44.2
Psat4g136360 Pisum sativum HOM05D001184 ORTHO05D003397 1.4e-12 77.4 54 72.2
AL4G11900 Arabidopsis lyrata HOM05D003208 ORTHO05D004103 3.2e-12 76.3 89 50.6
Cc07_g14750 Coffea canephora HOM05D003208 ORTHO05D004103 9.3e-12 74.7 86 46.5
Solyc11g010110.3 Solanum lycopersicum HOM05D003208 ORTHO05D004103 9.3e-12 74.7 86 51.2
CiPaw.03G144800 Carya illinoinensis HOM05D003208 ORTHO05D004103 1.6e-11 73.9 202 30.7
Sopen11g004910 Solanum pennellii HOM05D003208 ORTHO05D004103 4.6e-11 72.4 86 50.0
TWI74G0107 Tripterygium wilfordii HOM05D003208 ORTHO05D004103 6.0e-11 72.0 205 30.7
CAN.G905.28 Capsicum annuum HOM05D003208 ORTHO05D004103 7.9e-11 71.6 86 51.2
Actinidia19997 Actinidia chinensis HOM05D003208 ORTHO05D004103 2.3e-10 70.1 217 29.5
Haze_24868 Corylus avellana HOM05D003208 ORTHO05D004103 3.0e-10 69.7 206 31.1
COL.COLO4_27282 Corchorus olitorius HOM05D003208 ORTHO05D004103 3.9e-10 69.3 139 38.8
Psat6g077920 Pisum sativum HOM05D003208 ORTHO05D009148 5.1e-10 68.9 78 48.7
PGSC0003DMG400016157 Solanum tuberosum HOM05D003208 ORTHO05D004103 5.1e-10 68.9 86 48.8
BcaC02g08664 Brassica carinata HOM05D003208 ORTHO05D004103 6.7e-10 68.6 193 34.2
Cfa002613 Carpinus fangiana HOM05D003208 ORTHO05D004103 6.7e-10 68.6 150 36.7
CARHR113590 Cardamine hirsuta HOM05D003208 ORTHO05D004103 1.1e-09 67.8 193 30.1
Duzib147G1622 Durio zibethinus HOM05D003208 ORTHO05D004103 1.1e-09 67.8 139 36.7
Thhalv10000050m.g Eutrema salsugineum HOM05D003208 ORTHO05D004103 1.5e-09 67.4 85 44.7
BcaB08g35063 Brassica carinata HOM05D003208 ORTHO05D004103 1.9e-09 67.0 203 32.5
BcaC02g08665 Brassica carinata HOM05D003208 ORTHO05D004103 3.3e-09 66.2 205 32.7
CsaV3_6G045280 Cucumis sativus L. HOM05D003208 ORTHO05D004103 4.3e-09 65.9 84 42.9
Peaxi162Scf00044g00112 Petunia axillaris HOM05D003208 ORTHO05D004103 5.6e-09 65.5 86 43.0
Peaxi162Scf00381g00061 Petunia axillaris HOM05D003208 ORTHO05D004103 5.6e-09 65.5 88 46.6
THA.LOC104807678 Tarenaya hassleriana HOM05D003208 ORTHO05D004103 7.4e-09 65.1 167 34.7
Ciclev10024895m.g Citrus clementina HOM05D003208 ORTHO05D004103 1.3e-08 64.3 209 27.8
Sed0002614 Sechium edule HOM05D003208 ORTHO05D004103 1.3e-08 64.3 148 33.1
CANSAT01G1547 Cannabis sativa HOM05D003208 ORTHO05D004103 1.6e-08 63.9 85 47.1
MELO3C007741.2 Cucumis melo HOM05D003208 ORTHO05D004103 1.6e-08 63.9 84 42.9
AT2G22400 Arabidopsis thaliana HOM05D003208 ORTHO05D004103 2.1e-08 63.5 195 29.7
PGR102G0950 Punica granatum HOM05D003208 ORTHO05D004103 2.1e-08 63.5 109 40.4
Cpa.g.sc55.83 Carica papaya HOM05D003208 ORTHO05D004103 2.8e-08 63.2 192 30.7
GSVIVG01003416001 Vitis vinifera HOM05D003208 ORTHO05D004103 2.8e-08 63.2 165 33.3
Sopen05g029940 Solanum pennellii HOM05D003208 ORTHO05D004103 4.8e-08 62.4 86 40.7
Dinv13221 Davidia involucrata HOM05D003208 ORTHO05D004103 6.2e-08 62.0 211 28.4
CAN.G151.12 Capsicum annuum HOM05D003208 ORTHO05D004103 8.1e-08 61.6 85 42.4
CARHR246680 Cardamine hirsuta HOM05D003208 ORTHO05D004103 8.1e-08 61.6 104 43.3
MD15G1321600 Malus domestica HOM05D003208 ORTHO05D004103 8.1e-08 61.6 211 28.4
Solyc05g051520.3 Solanum lycopersicum HOM05D003208 ORTHO05D004103 8.1e-08 61.6 86 40.7
BcaC02g08709 Brassica carinata HOM05D003208 ORTHO05D004103 1.1e-07 61.2 187 32.1
Sp4g01430 Schrenkiella parvula HOM05D003208 ORTHO05D004103 1.8e-07 60.5 169 33.1
TWI77G0296 Tripterygium wilfordii HOM05D003208 ORTHO05D004103 1.8e-07 60.5 206 29.6
Migut.H02342 Erythranthe guttata HOM05D003208 ORTHO05D004103 2.4e-07 60.1 182 31.9
Gorai.003G041000 Gossypium raimondii HOM05D003208 ORTHO05D004103 2.4e-07 60.1 143 32.9
A04p16880 Brassica napus HOM05D003208 ORTHO05D004103 3.1e-07 59.7 159 34.0
BraA04t17321Z Brassica rapa HOM05D003208 ORTHO05D004103 3.1e-07 59.7 159 34.0
Potri.007G096100 Populus trichocarpa HOM05D003208 ORTHO05D004103 3.1e-07 59.7 212 29.2
Manes.12G131000 Manihot esculenta HOM05D003208 ORTHO05D004103 4.0e-07 59.3 217 28.1
Thecc.01G096900 Theobroma cacao HOM05D003208 ORTHO05D004103 4.0e-07 59.3 140 37.9
vmacro12976 Vaccinium macrocarpon HOM05D003208 ORTHO05D004103 4.0e-07 59.3 92 47.8
BolC4t26736H Brassica oleracea HOM05D003208 ORTHO05D004103 5.3e-07 58.9 163 35.6
AUR62027218 Chenopodium quinoa HOM05D003208 ORTHO05D004103 6.9e-07 58.5 99 43.4
Sabra07G0079200 Salix brachista HOM05D003208 ORTHO05D004103 6.9e-07 58.5 210 28.1
SGA_v2.0_scaffold111G31500 Striga asiatica HOM05D003208 ORTHO05D004103 6.9e-07 58.5 201 26.9
AUR62003252 Chenopodium quinoa HOM05D003208 ORTHO05D004103 9.0e-07 58.2 98 41.8
ECA246G0394 Erigeron canadensis HOM05D003208 ORTHO05D004103 9.0e-07 58.2 191 30.9
Thhalv10000064m.g Eutrema salsugineum HOM05D003208 ORTHO05D004103 9.0e-07 58.2 77 44.2
MD01G1034300 Malus domestica HOM05D003208 ORTHO05D004103 9.0e-07 58.2 211 28.9
Nitab4.5_0000241g0270 Nicotiana tabacum HOM05D003208 ORTHO05D004103 9.0e-07 58.2 126 35.7
Prupe.6G191700 Prunus persica HOM05D003208 ORTHO05D004103 9.0e-07 58.2 213 30.0
Aa31LG6G15240 Aethionema arabicum HOM05D003208 ORTHO05D004103 1.2e-06 57.8 71 45.1
Gohir.A02G129100 Gossypium hirsutum HOM05D003208 ORTHO05D004103 1.2e-06 57.8 147 34.7
Hma1.2p1_0019F.1_g013690 Hydrangea macrophylla HOM05D003208 ORTHO05D004103 1.2e-06 57.8 179 31.8
Atru.chr3.1361 Acer truncatum HOM05D003208 ORTHO05D004103 1.5e-06 57.4 162 32.1
Aa31LG7G14430 Aethionema arabicum HOM05D003208 ORTHO05D004103 1.5e-06 57.4 152 34.9
C04p51440 Brassica napus HOM05D003208 ORTHO05D004103 1.5e-06 57.4 198 29.3
SHI01116 Sapria himalayana HOM05D003208 ORTHO05D004103 1.5e-06 57.4 79 38.0
SalBow3G0841 Salvia bowleyana HOM05D003208 ORTHO05D004103 2.0e-06 57.0 194 27.8
SalBow3G1582 Salvia bowleyana HOM05D003208 ORTHO05D004103 2.0e-06 57.0 194 27.8
Sed0018597 Sechium edule HOM05D003208 ORTHO05D004103 2.0e-06 57.0 141 31.9
A09p57600 Brassica napus HOM05D003208 ORTHO05D004103 2.6e-06 56.6 201 31.8
Carub.0004s0156 Capsella rubella HOM05D003208 ORTHO05D004103 2.6e-06 56.6 197 29.9
Eucgr.H04746 Eucalyptus grandis HOM05D003208 ORTHO05D004103 2.6e-06 56.6 98 40.8
Nitab4.5_0000128g0250 Nicotiana tabacum HOM05D003208 ORTHO05D004103 2.6e-06 56.6 188 29.3
MSTRG.2578 Avicennia marina HOM05D003208 ORTHO05D004103 3.4e-06 56.2 137 31.4
Nitab4.5_0002604g0040 Nicotiana tabacum HOM05D003208 ORTHO05D004103 3.4e-06 56.2 143 32.2
Ah.02g126130 Amaranthus hybridus HOM05D003208 ORTHO05D004103 4.5e-06 55.8 183 31.1
DCAR_003477 Daucus carota HOM05D003208 ORTHO05D004103 4.5e-06 55.8 143 30.8
Gohir.D03G039900 Gossypium hirsutum HOM05D003208 ORTHO05D004103 4.5e-06 55.8 147 34.7
HanXRQChr07g0196311 Helianthus annuus HOM05D003208 ORTHO05D004103 5.8e-06 55.5 85 40.0
Nitab4.5_0012684g0010 Nicotiana tabacum HOM05D003208 ORTHO05D004103 5.8e-06 55.5 211 26.1
unitig_699.g19581 Utricularia gibba HOM05D003208 ORTHO05D004103 5.8e-06 55.5 91 36.3
AT4G40000 Arabidopsis thaliana HOM05D003208 ORTHO05D004103 7.6e-06 55.1 131 34.4
EL10Ac6g14824 Beta vulgaris HOM05D003208 ORTHO05D004103 7.6e-06 55.1 178 34.3
Sp7g35870 Schrenkiella parvula HOM05D003208 ORTHO05D004103 7.6e-06 55.1 118 34.7
BcaC07g41076 Brassica carinata HOM05D003208 ORTHO05D004103 9.9e-06 54.7 200 28.0
BolC8t51644H Brassica oleracea HOM05D003208 ORTHO05D004103 9.9e-06 54.7 200 28.0
Carub.0007s0196 Capsella rubella HOM05D003208 ORTHO05D004103 9.9e-06 54.7 189 30.7
TAR628G1304 Trochodendron aralioides HOM05D003208 ORTHO05D004103 9.9e-06 54.7 102 38.2


User provided reference genes

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