Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01813_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 1.9e-217 758.8 374 100.0
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 3.9e-186 654.8 366 88.8
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 9.6e-185 650.2 366 88.5
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 2.8e-184 648.7 366 87.4
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 2.2e-176 622.5 367 84.2
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 2.2e-176 622.5 367 84.5
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 3.7e-176 621.7 365 84.4
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 1.3e-173 613.2 360 83.6
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 2.9e-173 612.1 360 83.9
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 1.1e-172 610.1 365 82.7
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 1.1e-172 610.1 365 82.7
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 1.2e-171 606.7 360 81.9
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 1.6e-171 606.3 360 81.9
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 2.3e-170 602.4 360 81.4
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 2.3e-170 602.4 361 81.7
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 3.0e-170 602.1 361 80.9
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 3.9e-170 601.7 361 80.6
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 2.2e-168 595.9 365 79.2
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 2.4e-167 592.4 365 79.5
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 3.1e-167 592.0 360 79.7
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 4.1e-167 591.7 360 80.3
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 4.1e-167 591.7 360 80.8
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 5.3e-167 591.3 364 79.4
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 6.9e-167 590.9 360 80.6
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 1.2e-166 590.1 360 80.3
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 1.2e-166 590.1 368 78.3
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 1.5e-166 589.7 360 79.2
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 1.5e-166 589.7 361 79.5
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 2.0e-166 589.3 364 79.4
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 2.6e-166 589.0 360 79.4
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 4.5e-166 588.2 360 79.7
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 4.5e-166 588.2 360 78.9
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 4.5e-166 588.2 360 79.7
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 5.9e-166 587.8 360 80.8
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 5.9e-166 587.8 360 78.9
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 5.9e-166 587.8 362 78.5
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 5.9e-166 587.8 360 79.2
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 7.7e-166 587.4 360 79.4
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 1.3e-165 586.6 360 78.3
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 1.7e-165 586.3 360 79.7
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 2.2e-165 585.9 360 78.9
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 2.9e-165 585.5 360 78.3
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 2.9e-165 585.5 364 78.3
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 2.9e-165 585.5 360 78.6
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 3.8e-165 585.1 360 78.1
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 3.8e-165 585.1 360 78.6
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 6.5e-165 584.3 358 79.3
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 6.5e-165 584.3 360 78.6
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 8.5e-165 583.9 362 77.6
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 1.9e-164 582.8 366 77.9
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 2.5e-164 582.4 364 78.0
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 3.2e-164 582.0 368 76.9
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 3.2e-164 582.0 364 78.0
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 3.2e-164 582.0 361 77.6
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 4.2e-164 581.6 360 77.8
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 4.2e-164 581.6 360 77.8
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 4.2e-164 581.6 368 76.9
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 5.5e-164 581.3 360 78.9
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 5.5e-164 581.3 360 78.6
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 9.4e-164 580.5 365 78.6
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 1.6e-163 579.7 360 78.9
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 7.9e-163 577.4 360 77.8
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 3.9e-162 575.1 360 78.3
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 3.9e-162 575.1 360 78.1
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 6.7e-162 574.3 360 77.8
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 2.0e-161 572.8 360 78.6
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 9.7e-161 570.5 392 72.4
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 1.3e-160 570.1 365 78.1
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 4.8e-160 568.2 416 68.3
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 4.8e-160 568.2 394 71.1
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 6.3e-160 567.8 367 76.0
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 8.2e-160 567.4 394 71.8
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 2.4e-159 565.8 384 71.9
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 4.1e-159 565.1 360 76.9
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 7.0e-159 564.3 391 71.1
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 9.1e-159 563.9 360 76.7
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 2.6e-158 562.4 360 76.4
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 5.9e-158 561.2 362 74.9
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 7.7e-158 560.8 360 76.1
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 7.7e-158 560.8 360 76.1
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 2.2e-157 559.3 360 76.7
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 2.2e-157 559.3 364 73.6
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 3.8e-157 558.5 345 78.8
Atru.chr2.2913 Acer truncatum HOM05D005363 ORTHO05D006607 1.4e-156 556.6 334 80.5
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 1.4e-156 556.6 393 71.5
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 4.7e-155 551.6 345 78.0
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 8.0e-155 550.8 364 73.6
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 1.8e-154 549.7 360 72.5
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 2.0e-153 546.2 351 74.1
CDE12G0672 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 1.6e-150 536.6 360 73.6
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 4.5e-150 535.0 365 73.2
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 5.9e-150 534.6 360 72.8
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 9.4e-148 527.3 345 75.4
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 3.5e-142 508.8 319 78.1
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 1.0e-141 507.3 364 66.5
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 2.9e-141 505.8 346 73.4
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 2.9e-141 505.8 326 76.7
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 6.5e-141 504.6 363 65.8
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 1.1e-140 503.8 360 71.1
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 2.1e-139 499.6 366 68.0
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 1.4e-138 496.9 361 70.4
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 2.0e-134 483.0 367 63.8
CBR_g48040 Chara braunii HOM05D005363 ORTHO05D006607 5.6e-124 448.4 344 62.5
Zm00001eb171920 Zea mays HOM05D005363 ORTHO05D006607 4.4e-121 438.7 366 59.6
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.1e-116 424.1 249 81.9
Os08g0177600 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 1.6e-110 403.7 365 55.9
SEGI_22122 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 2.8e-99 366.3 215 78.6
Cre12.g556911 Chlamydomonas reinhardtii HOM05D005363 ORTHO05D006607 5.8e-89 332.0 348 49.1
MCO13G379 Micromonas commoda HOM05D005363 ORTHO05D006607 6.6e-85 318.5 401 43.4
CAN.G397.4 Capsicum annuum HOM05D005363 ORTHO05D006607 1.5e-81 307.4 257 62.6
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 4.2e-79 299.3 188 77.7
PRCOL_00003292 Prasinoderma coloniale HOM05D005363 ORTHO05D006607 7.6e-73 278.5 385 41.0
Nitab4.5_0007366g0060 Nicotiana tabacum HOM05D005363 ORTHO05D006607 1.7e-72 277.3 214 66.8
unitig_13.g31430 Utricularia gibba HOM05D005363 ORTHO05D006607 6.4e-72 275.4 346 47.4
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 1.2e-70 271.2 364 45.9
Cfa025591 Carpinus fangiana HOM05D005363 ORTHO05D006607 7.9e-70 268.5 378 38.1
MBI09_g27609_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 1.3e-69 267.7 157 79.6
PGSC0003DMG400002669 Solanum tuberosum HOM05D005363 ORTHO05D006607 7.6e-65 251.9 176 71.0
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 2.9e-56 223.4 188 62.8
SEGI_32923 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 5.3e-42 176.0 95 84.2
CDE12G0057 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 2.1e-38 164.1 144 57.6


User provided reference genes

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