Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00789_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 8.1e-211 736.9 385 100.0
Ca_11369_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 8.4e-200 700.3 367 99.5
Ca_30786_v3 Cicer arietinum L. HOM05D003391 ORTHO05D005563 8.4e-200 700.3 367 99.5
TPR.G10474 Trifolium pratense HOM05D003391 ORTHO05D005563 2.0e-193 679.1 367 96.7
Medtr2g028270 Medicago truncatula HOM05D003391 ORTHO05D005563 1.4e-191 672.9 367 95.6
Psat1g171000 Pisum sativum HOM05D003391 ORTHO05D005563 1.6e-190 669.5 367 95.1
arahy.Tifrunner.gnm1.ann1.635YAA Arachis hypogaea HOM05D003391 ORTHO05D005563 2.1e-187 659.1 367 92.9
arahy.Tifrunner.gnm1.ann1.QTWQ8J Arachis hypogaea HOM05D003391 ORTHO05D005563 2.1e-187 659.1 367 92.9
Lalb_Chr18g0057621 Lupinus albus HOM05D003391 ORTHO05D005563 4.8e-187 657.9 367 92.9
Glyma.09G018300 Glycine max HOM05D003391 ORTHO05D005563 1.4e-186 656.4 367 93.2
Phvul.006G134000 Phaseolus vulgaris HOM05D003391 ORTHO05D005563 4.0e-186 654.8 367 92.6
Lj6g0008612 Lotus japonicus HOM05D003391 ORTHO05D005563 1.2e-185 653.3 367 92.6
VMungo0540G0836 Vigna mungo HOM05D003391 ORTHO05D005563 2.6e-185 652.1 367 92.1
Glyma.15G124200 Glycine max HOM05D003391 ORTHO05D005563 5.8e-185 651.0 367 92.4
Lalb_Chr15g0088521 Lupinus albus HOM05D003391 ORTHO05D005563 1.9e-183 646.0 367 91.3
Gohir.D08G181000 Gossypium hirsutum HOM05D003391 ORTHO05D005563 6.4e-176 620.9 367 86.9
Gorai.004G190000 Gossypium raimondii HOM05D003391 ORTHO05D005563 6.4e-176 620.9 367 86.9
Prupe.3G191700 Prunus persica HOM05D003391 ORTHO05D005563 8.4e-176 620.5 367 88.6
Gohir.A08G160766 Gossypium hirsutum HOM05D003391 ORTHO05D005563 1.1e-175 620.2 367 86.9
RcHm_v2.0_Chr2g0154761 Rosa chinensis HOM05D003391 ORTHO05D005563 1.1e-175 620.2 367 86.9
Cfa018226 Carpinus fangiana HOM05D003391 ORTHO05D005563 3.2e-175 618.6 367 86.4
MD09G1135000 Malus domestica HOM05D003391 ORTHO05D005563 7.1e-175 617.5 367 87.2
CsaV3_4G032190 Cucumis sativus L. HOM05D003391 ORTHO05D005563 1.6e-174 616.3 367 86.1
Thecc.03G235800 Theobroma cacao HOM05D003391 ORTHO05D005563 1.6e-174 616.3 367 86.9
Hma1.2p1_0583F.1_g183000 Hydrangea macrophylla HOM05D003391 ORTHO05D005563 2.1e-174 615.9 366 86.6
GSVIVG01016094001 Vitis vinifera HOM05D003391 ORTHO05D005563 2.1e-174 615.9 366 86.3
MELO3C026391.2 Cucumis melo HOM05D003391 ORTHO05D005563 4.6e-174 614.8 367 85.8
QL04p065456 Quercus lobata HOM05D003391 ORTHO05D005563 4.6e-174 614.8 367 86.1
FAN02G4219 Fragaria x ananassa HOM05D003391 ORTHO05D005563 7.9e-174 614.0 367 86.4
CANSAT64G0651 Cannabis sativa HOM05D003391 ORTHO05D005563 1.0e-173 613.6 367 86.4
Duzib084G0647 Durio zibethinus HOM05D003391 ORTHO05D005563 1.0e-173 613.6 367 86.9
MD17G1124000 Malus domestica HOM05D003391 ORTHO05D005563 1.8e-173 612.8 367 86.6
Sed0012933 Sechium edule HOM05D003391 ORTHO05D005563 3.9e-173 611.7 367 86.1
FAN09G1714 Fragaria x ananassa HOM05D003391 ORTHO05D005563 6.7e-173 610.9 368 86.7
FAN05G0705 Fragaria x ananassa HOM05D003391 ORTHO05D005563 8.7e-173 610.5 368 86.4
FvH4_6g40130 Fragaria vesca HOM05D003391 ORTHO05D005563 2.5e-172 609.0 367 86.6
TWI77G0821 Tripterygium wilfordii HOM05D003391 ORTHO05D005563 4.3e-172 608.2 367 84.7
Dinv10208 Davidia involucrata HOM05D003391 ORTHO05D005563 7.4e-172 607.4 366 85.8
CiPaw.10G102000 Carya illinoinensis HOM05D003391 ORTHO05D005563 9.6e-172 607.1 367 85.8
Atru.chr13.1465 Acer truncatum HOM05D003391 ORTHO05D005563 4.8e-171 604.7 367 85.0
TWI74G0249 Tripterygium wilfordii HOM05D003391 ORTHO05D005563 1.1e-170 603.6 367 84.5
Cpa.g.sc122.39 Carica papaya HOM05D003391 ORTHO05D005563 4.0e-170 601.7 368 85.6
Aa31LG10G3790 Aethionema arabicum HOM05D003391 ORTHO05D005563 2.0e-169 599.4 367 83.1
Eucgr.L01917 Eucalyptus grandis HOM05D003391 ORTHO05D005563 5.8e-169 597.8 367 83.9
Eucgr.G02677 Eucalyptus grandis HOM05D003391 ORTHO05D005563 7.6e-169 597.4 367 83.9
CSS0023421 Camellia sinensis var. sinensis HOM05D003391 ORTHO05D005563 1.0e-168 597.0 366 83.1
THA.LOC104809239 Tarenaya hassleriana HOM05D003391 ORTHO05D005563 2.9e-168 595.5 367 83.1
PGR042G2316 Punica granatum HOM05D003391 ORTHO05D005563 4.9e-168 594.7 367 82.6
TAR626G0891 Trochodendron aralioides HOM05D003391 ORTHO05D005563 6.0e-166 587.8 366 82.8
Nn7g37683 Nelumbo nucifera HOM05D003391 ORTHO05D005563 3.9e-165 585.1 366 80.1
Manes.01G037700 Manihot esculenta HOM05D003391 ORTHO05D005563 5.1e-165 584.7 367 81.7
PSO541G1880 Papaver somniferum HOM05D003391 ORTHO05D005563 6.7e-165 584.3 366 80.6
PSO675G3205 Papaver somniferum HOM05D003391 ORTHO05D005563 8.7e-165 583.9 366 80.6
Cc06_g14340 Coffea canephora HOM05D003391 ORTHO05D005563 1.3e-163 580.1 367 81.7
MSTRG.27454 Avicennia marina HOM05D003391 ORTHO05D005563 4.8e-163 578.2 366 82.0
CSS0020230 Camellia sinensis var. sinensis HOM05D003391 ORTHO05D005563 8.2e-163 577.4 374 80.5
Sc24g0003350 Simmondsia chinensis HOM05D003391 ORTHO05D005563 1.1e-162 577.0 366 80.3
vmacro13793 Vaccinium macrocarpon HOM05D003391 ORTHO05D005563 1.1e-162 577.0 366 80.1
FAN14G1902 Fragaria x ananassa HOM05D003391 ORTHO05D005563 3.1e-162 575.5 418 75.8
SalBow4G0334 Salvia bowleyana HOM05D003391 ORTHO05D005563 9.0e-162 573.9 376 79.0
MSTRG.9187 Avicennia marina HOM05D003391 ORTHO05D005563 3.4e-161 572.0 366 81.1
Migut.F01784 Erythranthe guttata HOM05D003391 ORTHO05D005563 4.5e-161 571.6 366 79.8
Migut.F02007 Erythranthe guttata HOM05D003391 ORTHO05D005563 4.5e-161 571.6 366 80.6
Potri.016G023000 Populus trichocarpa HOM05D003391 ORTHO05D005563 5.9e-161 571.2 367 80.1
Aqoxy3G00251 Aquilegia oxysepala HOM05D003391 ORTHO05D005563 1.0e-160 570.5 366 80.1
MBI18_g28220_MAGBIO Magnolia biondii HOM05D003391 ORTHO05D005563 3.8e-160 568.5 370 79.5
EL10Ac9g21140 Beta vulgaris HOM05D003391 ORTHO05D005563 6.5e-160 567.8 366 77.9
CAN.G466.12 Capsicum annuum HOM05D003391 ORTHO05D005563 1.1e-159 567.0 366 77.9
AUR62023891 Chenopodium quinoa HOM05D003391 ORTHO05D005563 1.1e-159 567.0 366 78.4
Solyc04g049490.3 Solanum lycopersicum HOM05D003391 ORTHO05D005563 1.1e-159 567.0 366 77.9
Sopen04g019460 Solanum pennellii HOM05D003391 ORTHO05D005563 2.5e-159 565.8 366 77.6
ECA236G2623 Erigeron canadensis HOM05D003391 ORTHO05D005563 2.7e-158 562.4 366 79.0
HanXRQChr04g0122221 Helianthus annuus HOM05D003391 ORTHO05D005563 4.6e-158 561.6 366 79.0
Peaxi162Scf00072g00087 Petunia axillaris HOM05D003391 ORTHO05D005563 4.6e-158 561.6 366 77.9
COL.COLO4_06714 Corchorus olitorius HOM05D003391 ORTHO05D005563 6.1e-158 561.2 367 80.7
Atru.chr13.1440 Acer truncatum HOM05D003391 ORTHO05D005563 1.3e-157 560.1 367 80.1
BolC5t32086H Brassica oleracea HOM05D003391 ORTHO05D005563 1.3e-157 560.1 372 77.2
BraA05t20918Z Brassica rapa HOM05D003391 ORTHO05D005563 1.3e-157 560.1 372 77.2
A05p20100 Brassica napus HOM05D003391 ORTHO05D005563 3.0e-157 558.9 367 78.2
C05p33590 Brassica napus HOM05D003391 ORTHO05D005563 3.0e-157 558.9 367 78.2
Duzib068G0467 Durio zibethinus HOM05D003391 ORTHO05D005563 3.0e-157 558.9 367 81.2
BcaB02g11154 Brassica carinata HOM05D003391 ORTHO05D005563 6.7e-157 557.8 367 78.2
CAN.G998.14 Capsicum annuum HOM05D003391 ORTHO05D005563 6.7e-157 557.8 366 76.5
Thhalv10011301m.g Eutrema salsugineum HOM05D003391 ORTHO05D005563 1.5e-156 556.6 369 78.0
BcaC05g27411 Brassica carinata HOM05D003391 ORTHO05D005563 3.3e-156 555.4 367 77.9
CARHR040530 Cardamine hirsuta HOM05D003391 ORTHO05D005563 7.4e-156 554.3 370 76.8
CDE02G0628 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 1.1e-154 550.4 370 77.0
Lj7A654G26 Lonicera japonica HOM05D003391 ORTHO05D005563 2.4e-154 549.3 338 82.8
Haze_17876 Corylus avellana HOM05D003391 ORTHO05D005563 1.5e-153 546.6 323 86.1
AL1G58160 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 2.0e-153 546.2 374 75.7
Sp1g37350 Schrenkiella parvula HOM05D003391 ORTHO05D005563 3.4e-153 545.4 370 75.7
SGA_v2.0_scaffold62G21434 Striga asiatica HOM05D003391 ORTHO05D005563 3.8e-152 542.0 450 65.6
AT1G50500 Arabidopsis thaliana HOM05D003391 ORTHO05D005563 1.4e-151 540.0 374 74.6
ATR1098G037 Amborella trichopoda HOM05D003391 ORTHO05D005563 2.5e-151 539.3 371 76.5
BcaC01g01234 Brassica carinata HOM05D003391 ORTHO05D005563 3.2e-151 538.9 375 75.5
ClCG11G016680 Citrullus lanatus HOM05D003391 ORTHO05D005563 1.6e-150 536.6 346 80.9
ECA240G2134 Erigeron canadensis HOM05D003391 ORTHO05D005563 7.9e-150 534.3 366 72.4
Carub.0001s3957 Capsella rubella HOM05D003391 ORTHO05D005563 8.8e-149 530.8 370 74.6
HanXRQChr03g0093781 Helianthus annuus HOM05D003391 ORTHO05D005563 5.7e-148 528.1 366 73.8
Zm00001eb144220 Zea mays HOM05D003391 ORTHO05D005563 2.4e-146 522.7 367 73.8
Oeu033843.4 Olea europaea HOM05D003391 ORTHO05D005563 3.1e-146 522.3 417 68.6
DCAR_003077 Daucus carota HOM05D003391 ORTHO05D005563 6.9e-146 521.2 366 74.0
Hund02122 Selenicereus undatus HOM05D003391 ORTHO05D005563 3.2e-143 512.3 366 72.7
Sabra16G0023000 Salix brachista HOM05D003391 ORTHO05D005563 1.2e-142 510.4 367 73.3
Sabra16G0029200 Salix brachista HOM05D003391 ORTHO05D005563 1.2e-142 510.4 367 73.3
AUR62022296 Chenopodium quinoa HOM05D003391 ORTHO05D005563 3.6e-142 508.8 366 71.6
Nitab4.5_0000575g0140 Nicotiana tabacum HOM05D003391 ORTHO05D005563 1.4e-141 506.9 366 72.1
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 1.1e-138 497.3 370 71.6
Lsat_1_v5_gn_7_7561 Lactuca sativa HOM05D003391 ORTHO05D005563 2.4e-138 496.1 375 70.9
Nitab4.5_0007706g0020 Nicotiana tabacum HOM05D003391 ORTHO05D005563 7.0e-138 494.6 366 71.0
Oeu030440.3 Olea europaea HOM05D003391 ORTHO05D005563 1.7e-136 490.0 394 67.3
BcaB04g17246 Brassica carinata HOM05D003391 ORTHO05D005563 1.8e-125 453.4 359 69.1
unitig_899.g14436 Utricularia gibba HOM05D003391 ORTHO05D005563 2.3e-125 453.0 353 68.0
Mapoly0030s0152 Marchantia polymorpha HOM05D003391 ORTHO05D005563 1.1e-122 444.1 371 63.9
SMO196G0220 Selaginella moellendorffii HOM05D003391 ORTHO05D005563 9.1e-122 441.0 377 61.0
AagrBONN_evm.TU.Sc2ySwM_228.283 Anthoceros agrestis HOM05D003391 ORTHO05D005563 6.1e-118 428.3 375 61.1
Pp3c24_4920 Physcomitrium patens HOM05D003391 ORTHO05D005563 3.0e-117 426.0 366 59.6
Lsat_1_v5_gn_3_133361 Lactuca sativa HOM05D003391 ORTHO05D005563 5.2e-117 425.2 366 62.6
Pp3c8_8190 Physcomitrium patens HOM05D003391 ORTHO05D005563 5.7e-116 421.8 366 59.0
AL1G58810 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 1.3e-115 420.6 366 62.6
C03p89680 Brassica napus HOM05D003391 ORTHO05D005563 2.2e-115 419.9 393 60.3
PGSC0003DMG402012873 Solanum tuberosum HOM05D003391 ORTHO05D005563 1.4e-109 400.6 244 81.6
Rhsim05G0168000 Rhododendron simsii HOM05D003391 ORTHO05D005563 8.3e-107 391.3 339 64.9
AL1G58840 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 1.6e-102 377.1 367 59.1
Ciclev10028552m.g Citrus clementina HOM05D003391 ORTHO05D005563 6.0e-97 358.6 209 86.1
Os01g0906200 Oryza sativa ssp. japonica HOM05D003391 ORTHO05D005563 7.3e-95 351.7 226 76.5
HPP92_006006 Vanilla planifolia HOM05D003391 ORTHO05D005563 9.5e-95 351.3 251 74.5
CBR_g35042 Chara braunii HOM05D003391 ORTHO05D005563 1.2e-94 350.9 448 46.2
Actinidia37789 Actinidia chinensis HOM05D003391 ORTHO05D005563 6.8e-93 345.1 235 77.4
Ah.01g004390 Amaranthus hybridus HOM05D003391 ORTHO05D005563 9.9e-92 341.3 366 54.1
arahy.Tifrunner.gnm1.ann1.MM6MID Arachis hypogaea HOM05D003391 ORTHO05D005563 1.1e-90 337.8 367 58.6
SEGI_15776 Sequoiadendron giganteum HOM05D003391 ORTHO05D005563 2.3e-64 250.4 165 74.5
PRCOL_00003915 Prasinoderma coloniale HOM05D003391 ORTHO05D005563 1.6e-62 244.2 371 38.0
SHI21342 Sapria himalayana HOM05D003391 ORTHO05D005563 2.1e-57 227.3 228 57.9
Rhsim11G0087500 Rhododendron simsii HOM05D003391 ORTHO05D005563 1.8e-48 197.6 194 58.2
Ciclev10029974m.g Citrus clementina HOM05D003391 ORTHO05D005563 6.7e-48 195.7 174 63.2
BolC3t21285H Brassica oleracea HOM05D003391 ORTHO05D005563 8.7e-48 195.3 163 65.6
Actinidia03950 Actinidia chinensis HOM05D003391 ORTHO05D005563 1.4e-45 188.0 110 81.8
MCO12G450 Micromonas commoda HOM05D003391 ORTHO05D005563 4.8e-38 162.9 400 31.2
Cre06.g259600 Chlamydomonas reinhardtii HOM05D003391 ORTHO05D005563 1.5e-36 157.9 387 31.5
RcHm_v2.0_Chr1g0364361 Rosa chinensis HOM05D003391 ORTHO05D005413 8.5e-35 152.1 157 57.3
SEGI_01209 Sequoiadendron giganteum HOM05D003391 ORTHO05D005563 1.9e-34 151.0 103 69.9
HPP92_006005 Vanilla planifolia HOM05D003391 ORTHO05D005563 3.2e-26 123.6 80 75.0
SHI21339 Sapria himalayana HOM05D003391 ORTHO05D005563 7.2e-26 122.5 119 56.3
Manes.07G058173 Manihot esculenta HOM05D003391 ORTHO05D250310 2.1e-25 120.9 79 83.5
Manes.12G128950 Manihot esculenta HOM05D003391 ORTHO05D249565 2.1e-25 120.9 79 83.5
PGSC0003DMG401012873 Solanum tuberosum HOM05D003391 ORTHO05D005563 6.1e-25 119.4 96 65.6
Manes.13G081678 Manihot esculenta HOM05D003391 ORTHO05D250639 1.8e-24 117.9 79 82.3
Cfa021970 Carpinus fangiana HOM05D003391 ORTHO05D125001 8.8e-24 115.5 372 26.9
Manes.08G058900 Manihot esculenta HOM05D003391 ORTHO05D250822 3.5e-20 103.6 67 83.6
Oeu063006.1 Olea europaea HOM05D001351 ORTHO05D001203 2.5e-18 97.4 70 72.9
AT1G50970 Arabidopsis thaliana HOM05D003391 ORTHO05D005563 8.2e-14 82.4 131 42.0
ECA246G3223 Erigeron canadensis HOM05D001124 ORTHO05D001004 4.7e-09 66.6 116 41.4


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