Gene: Sopen04g019460

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g019460
  • Transcript Identifier Sopen04g019460.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 50202404-50222061 : positive

Gene Family Information

  • ID HOM05D003391
  • #Genes/#Species 202/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g019460.1

Descriptions

  • Description encodes a member of VPS53 family protein involved in the retrograde trafficking of vesicles to the late Golgi. Mutants in this gene are more sensitive to heat and osmotic stress. | HEAT-INTOLERANT 1 (HIT1) | CONTAINS InterPro DOMAIN/s: Vps53-like, N-terminal | BEST Arabidopsis thaliana protein match is: Membrane trafficking VPS53 family protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042147
IEA
InterProretrograde transport, endosome to Golgi
GO:0010286
ISO
PLAZA Integrative Orthologyheat acclimation AT1G50500
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G50500
GO:0007009
ISO
PLAZA Integrative Orthologyplasma membrane organization AT1G50500
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT1G50500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G50500

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000938
IEA
InterProGARP complex
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G50500
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT1G50500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039766 Vacuolar protein sorting-associated protein 53
IPR007234 Vps53-like, N-terminal
IPR038260 Vps53, C-terminal domain superfamily
Mapman id Description
22.3.4.8.3 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.GARP/EARP complexes.component VPS53/HIT1