Gene: Cre06.g259600
General Information
Structural Information
- Species Chlamydomonas reinhardtii
- Gene Identifier Cre06.g259600
- Transcript Identifier Cre06.g259600.t1.1
- Gene Type Coding gene
- Location chromosome_6 : 1486217-1494777 : negative
Gene Family Information
- ID HOM05D003391
- #Genes/#Species 202/100
- Phylogenetic origin
- ID ORTHO05D005563
- #Genes/#Species 155/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Cre06.g259600.v5.5
- pacid 30779063
- alias g5836.t1
- geneName VPS53
- uniprot A8HXN9
Descriptions
- Description Subunit of GARP complex
- Description Expressed Protein. Similar to VPS53, a component of the GARP (Golgi-associated retrograde protein) complex
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042147 | IEA | GOA Database | retrograde transport, endosome to Golgi | |
| GO:0042147 | IEA | InterPro | retrograde transport, endosome to Golgi | |
| GO:0010286 | ISO | PLAZA Integrative Orthology | heat acclimation | AT1G50500 |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT1G50500 |
| GO:0007009 | ISO | PLAZA Integrative Orthology | plasma membrane organization | AT1G50500 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT1G50500 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G50500 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IEA | GOA Database | cytosol | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0010008 | IEA | GOA Database | endosome membrane | |
| GO:0005768 | IEA | GOA Database | endosome | |
| GO:0000938 | IEA | GOA Database | GARP complex | |
| GO:0000938 | IEA | InterPro | GARP complex | |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G50500 |
| GO:0000139 | ISO | PLAZA Integrative Orthology | Golgi membrane | AT1G50500 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.4.8.3 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.GARP/EARP complexes.component VPS53/HIT1 |