Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.4e-99 365.5 187 100.0
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 7.9e-79 297.4 174 89.7
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.0e-78 295.4 174 90.2
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 3.6e-71 271.9 174 81.0
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.0e-69 266.2 181 76.8
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.3e-65 253.4 174 79.3
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.5e-65 251.1 174 78.7
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 1.1e-64 250.4 181 73.5
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 1.1e-64 250.4 174 73.6
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 3.2e-64 248.8 189 72.0
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 3.2e-64 248.8 174 75.3
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 6.1e-63 244.6 181 72.4
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 1.4e-62 243.4 174 72.4
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.3e-62 242.7 194 72.2
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 2.3e-62 242.7 175 72.6
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 3.0e-62 242.3 181 71.8
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 4.0e-62 241.9 174 73.6
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 8.8e-62 240.7 174 73.6
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 6.3e-60 234.6 181 68.5
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 1.4e-59 233.4 174 71.3
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 1.4e-59 233.4 182 68.1
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 3.1e-59 232.3 174 71.3
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 1.2e-58 230.3 171 71.9
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 1.2e-58 230.3 174 70.7
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 2.6e-58 229.2 175 70.3
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 2.6e-58 229.2 174 68.4
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 2.6e-58 229.2 174 68.4
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 5.9e-58 228.0 174 69.0
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 5.9e-58 228.0 179 67.6
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 1.7e-57 226.5 181 69.1
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 2.2e-57 226.1 178 66.9
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 2.9e-57 225.7 182 64.3
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 3.8e-57 225.3 175 66.3
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 6.5e-57 224.6 174 69.0
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 1.1e-56 223.8 174 69.5
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 1.1e-56 223.8 182 69.2
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 1.5e-56 223.4 181 69.1
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 1.5e-56 223.4 175 68.0
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 1.5e-56 223.4 182 64.8
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 2.5e-56 222.6 181 67.4
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 3.2e-56 222.2 174 69.0
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 3.2e-56 222.2 174 66.7
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 5.5e-56 221.5 181 65.2
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 9.4e-56 220.7 180 65.6
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.2e-55 220.3 175 69.7
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 1.2e-55 220.3 175 69.7
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 1.2e-55 220.3 174 67.2
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 1.6e-55 219.9 174 65.5
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.6e-55 219.9 181 64.1
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.1e-55 219.5 181 65.2
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 2.1e-55 219.5 181 64.1
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 2.1e-55 219.5 175 64.6
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 3.6e-55 218.8 182 67.6
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 6.1e-55 218.0 174 66.7
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 6.1e-55 218.0 174 66.7
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 8.0e-55 217.6 174 69.0
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 8.0e-55 217.6 175 69.1
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.4e-54 216.9 174 66.1
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 1.4e-54 216.9 175 64.0
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 1.4e-54 216.9 181 67.4
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 1.8e-54 216.5 181 64.6
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 6.8e-54 214.5 184 64.1
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 1.2e-53 213.8 177 63.3
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 1.5e-53 213.4 174 67.2
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 1.5e-53 213.4 187 63.6
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 2.0e-53 213.0 184 64.1
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 2.0e-53 213.0 174 63.8
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 4.4e-53 211.8 181 62.4
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 4.4e-53 211.8 174 62.1
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 5.7e-53 211.5 175 64.6
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 5.7e-53 211.5 174 67.8
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 7.5e-53 211.1 174 64.4
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 9.8e-53 210.7 174 63.8
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 1.3e-52 210.3 174 64.9
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 2.2e-52 209.5 158 68.4
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 2.8e-52 209.1 174 67.2
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 3.7e-52 208.8 182 61.5
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 3.7e-52 208.8 168 64.3
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 4.8e-52 208.4 174 66.7
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 4.8e-52 208.4 174 66.7
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 6.3e-52 208.0 182 61.5
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 6.3e-52 208.0 174 66.7
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 1.4e-51 206.8 174 66.7
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 1.8e-51 206.5 174 66.1
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 2.4e-51 206.1 174 66.1
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 2.4e-51 206.1 181 64.1
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 2.4e-51 206.1 174 66.1
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 5.4e-51 204.9 174 65.5
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 9.1e-51 204.1 168 62.5
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 1.2e-50 203.8 174 65.5
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 1.2e-50 203.8 174 65.5
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 1.2e-50 203.8 174 65.5
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.7e-50 202.6 175 60.6
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 2.7e-50 202.6 184 58.2
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 7.7e-50 201.1 181 60.8
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 1.3e-49 200.3 181 63.5
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 1.7e-49 199.9 180 62.2
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 3.8e-49 198.7 175 60.0
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 8.5e-49 197.6 175 60.6
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 3.2e-48 195.7 179 57.5
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 9.4e-48 194.1 168 64.9
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.6e-47 193.4 181 58.0
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 1.6e-47 193.4 175 58.9
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 8.8e-46 187.6 175 57.7
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 1.3e-44 183.7 177 59.3
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 2.4e-43 179.5 178 59.0
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 2.8e-31 139.4 178 47.2
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 3.4e-29 132.5 166 44.0
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.3e-28 130.6 181 47.5
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 7.0e-27 124.8 167 45.5
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 6.4e-20 101.7 66 72.7
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 1.5e-16 90.5 174 35.6
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 4.0e-14 82.4 73 60.3
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 2.3e-09 66.6 56 58.9
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 1.9e-08 63.5 184 29.3
BcaNung06672 Brassica carinata HOM05D001849 ORTHO05D004689 6.2e-07 58.5 35 74.3


User provided reference genes

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