Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0046430 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D001131 1.7e-60 235.7 113 100.0
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 1.8e-30 136.0 136 57.4
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 7.0e-30 134.0 116 64.7
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.2e-29 133.3 130 57.7
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.7e-29 132.1 145 53.8
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 1.3e-28 129.8 160 50.0
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.7e-28 129.4 142 54.2
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 2.3e-28 129.0 160 49.4
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 5.6e-27 124.4 142 53.5
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 1.6e-26 122.9 159 47.8
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 6.1e-26 120.9 160 46.9
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 1.2e-24 116.7 77 79.2
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 1.2e-24 116.7 77 79.2
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 1.2e-24 116.7 77 79.2
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 1.2e-24 116.7 77 79.2
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 1.2e-24 116.7 77 79.2
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 1.2e-24 116.7 77 79.2
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 1.2e-24 116.7 77 79.2
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 2.6e-24 115.5 165 44.8
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 4.4e-24 114.8 77 76.6
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 5.7e-24 114.4 77 77.9
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 5.7e-24 114.4 77 77.9
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 5.7e-24 114.4 77 77.9
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 7.5e-24 114.0 77 77.9
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 7.5e-24 114.0 77 77.9
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 7.5e-24 114.0 77 77.9
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 9.8e-24 113.6 77 76.6
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 9.8e-24 113.6 77 76.6
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.3e-23 113.2 116 56.9
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 1.7e-23 112.8 109 58.7
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 1.7e-23 112.8 77 76.6
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 1.7e-23 112.8 77 76.6
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 1.7e-23 112.8 77 76.6
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 1.7e-23 112.8 77 76.6
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 3.7e-23 111.7 77 75.3
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 3.7e-23 111.7 77 75.3
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 3.7e-23 111.7 77 75.3
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 3.7e-23 111.7 125 55.2
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 4.9e-23 111.3 77 74.0
C04p22650 Brassica napus HOM05D000216 ORTHO05D001131 4.9e-23 111.3 77 74.0
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 4.9e-23 111.3 77 74.0
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 4.9e-23 111.3 77 74.0
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 4.9e-23 111.3 77 74.0
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 4.9e-23 111.3 77 74.0
BolSC37t60764H Brassica oleracea HOM05D000216 ORTHO05D001131 6.4e-23 110.9 77 72.7
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 6.4e-23 110.9 77 72.7
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 6.4e-23 110.9 77 72.7
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 2.4e-22 109.0 77 74.0
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 2.4e-22 109.0 77 74.0
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 3.2e-22 108.6 77 74.0
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27928 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28280 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28555 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.1e-22 108.2 77 72.7
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 7.0e-22 107.5 77 70.1
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.2e-22 107.1 77 71.4
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.0e-21 105.9 77 71.4
BolC7t41731H Brassica oleracea HOM05D000216 ORTHO05D001131 3.5e-21 105.1 77 71.4
BolSC46t60987H Brassica oleracea HOM05D000216 ORTHO05D001131 1.1e-19 100.1 77 68.8
arahy.Tifrunner.gnm1.ann1.Q51NGA Arachis hypogaea HOM05D000216 ORTHO05D001131 3.3e-19 98.6 75 70.7
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 3.3e-19 98.6 93 61.3
Solyc02g067590.2 Solanum lycopersicum HOM05D000216 ORTHO05D001131 4.3e-19 98.2 72 72.2
HanXRQChr00c0165g0572161 Helianthus annuus HOM05D000216 ORTHO05D001131 7.3e-19 97.4 75 68.0
HanXRQChr11g0326591 Helianthus annuus HOM05D000216 ORTHO05D001131 9.5e-19 97.1 76 67.1
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 9.5e-19 97.1 76 67.1
BolSC45t60873H Brassica oleracea HOM05D000216 ORTHO05D001131 1.6e-18 96.3 54 83.3
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 1.6e-18 96.3 76 67.1
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 1.6e-18 96.3 76 67.1
Psat0s5655g0160 Pisum sativum HOM05D000216 ORTHO05D001131 3.6e-18 95.1 74 67.6
Eucgr.E02520 Eucalyptus grandis HOM05D000216 ORTHO05D001131 4.7e-18 94.7 65 72.3
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 6.2e-18 94.4 63 76.2
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 1.1e-17 93.6 64 75.0
VMungo0647G1325 Vigna mungo HOM05D000216 ORTHO05D001131 2.3e-17 92.4 64 75.0
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 2.3e-17 92.4 64 75.0
Psat4g147960 Pisum sativum HOM05D000216 ORTHO05D001131 6.8e-17 90.9 64 73.4
Psat0s6638g0160 Pisum sativum HOM05D000216 ORTHO05D001131 8.9e-17 90.5 54 81.5
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 1.2e-16 90.1 64 73.4
Gohir.D12G085301 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.5e-16 89.7 119 46.2
BraSC25t45880Z Brassica rapa HOM05D000216 ORTHO05D001131 4.4e-16 88.2 71 64.8
Gorai.007G168000 Gossypium raimondii HOM05D000216 ORTHO05D001131 4.4e-16 88.2 54 83.3
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 5.8e-16 87.8 144 41.0
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 1.3e-15 86.7 64 73.4
Gorai.008G095600 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.7e-15 86.3 65 69.2
Medtr5g005060 Medicago truncatula HOM05D000216 ORTHO05D001131 1.1e-14 83.6 56 76.8
ClCG07G004170 Citrullus lanatus HOM05D000216 ORTHO05D001131 2.4e-14 82.4 93 55.9
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 7.0e-14 80.9 138 39.9
Gorai.005G047300 Gossypium raimondii HOM05D000216 ORTHO05D001131 5.0e-12 74.7 61 62.3
CAN.G1243.1 Capsicum annuum HOM05D000216 ORTHO05D001131 5.2e-09 64.7 37 86.5
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.4e-08 62.0 45 71.1
Solyc12g035950.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 4.4e-08 61.6 41 70.7
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 5.8e-08 61.2 45 71.1
Eucgr.B02475 Eucalyptus grandis HOM05D000216 ORTHO05D001131 1.3e-07 60.1 53 64.2
Mapoly0019s0087 Marchantia polymorpha HOM05D000216 ORTHO05D001131 2.9e-07 58.9 44 56.8
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 4.9e-07 58.2 42 69.0
Nitab4.5_0001715g0110 Nicotiana tabacum HOM05D000216 ORTHO05D001131 5.4e-06 54.7 74 51.4


User provided reference genes

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