Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0042972 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 6.1e-76 287.3 138 100.0
CSS0049488 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.7e-70 269.2 138 94.2
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 8.8e-67 256.9 138 90.6
GSVIVG01000874001 Vitis vinifera HOM05D001670 ORTHO05D002980 3.1e-64 248.4 138 88.4
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 1.1e-61 240.0 138 83.3
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 4.2e-61 238.0 138 82.6
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 7.2e-61 237.3 138 81.2
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 9.4e-61 236.9 138 81.9
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 9.4e-61 236.9 138 82.6
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 1.2e-60 236.5 138 85.5
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 1.2e-60 236.5 138 82.6
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 1.6e-60 236.1 138 82.6
Oeu064576.1 Olea europaea HOM05D001670 ORTHO05D002980 1.6e-60 236.1 138 81.2
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 2.1e-60 235.7 138 81.9
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 2.7e-60 235.3 138 81.2
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 2.7e-60 235.3 138 81.9
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 2.7e-60 235.3 138 81.9
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 3.6e-60 235.0 138 80.4
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 3.6e-60 235.0 138 80.4
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 4.7e-60 234.6 138 79.7
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 4.7e-60 234.6 138 81.2
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 6.1e-60 234.2 138 81.9
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 6.1e-60 234.2 138 81.2
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 6.1e-60 234.2 138 81.9
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 6.1e-60 234.2 138 82.6
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 7.9e-60 233.8 138 79.7
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 7.9e-60 233.8 138 79.7
Hma1.2p1_0341F.1_g130260 Hydrangea macrophylla HOM05D001670 ORTHO05D002980 7.9e-60 233.8 138 81.2
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 7.9e-60 233.8 138 81.9
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 7.9e-60 233.8 138 81.9
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 1.0e-59 233.4 138 79.7
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.0e-59 233.4 138 79.7
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.0e-59 233.4 138 79.7
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.0e-59 233.4 138 79.7
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.0e-59 233.4 138 79.7
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 1.0e-59 233.4 138 79.7
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 1.0e-59 233.4 138 81.2
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.4e-59 233.0 138 80.4
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 1.4e-59 233.0 138 80.4
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 1.8e-59 232.6 138 80.4
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 1.8e-59 232.6 138 79.7
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 5.1e-59 231.1 138 79.7
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 5.1e-59 231.1 138 81.2
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 6.7e-59 230.7 138 79.0
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 8.8e-59 230.3 138 79.0
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.1e-58 229.9 138 79.7
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 1.5e-58 229.6 138 81.2
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.5e-58 229.6 138 79.0
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.5e-58 229.6 138 79.0
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 1.5e-58 229.6 138 79.0
Lj7C538T12 Lonicera japonica HOM05D001670 ORTHO05D002980 2.0e-58 229.2 138 79.7
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 2.0e-58 229.2 138 79.0
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 2.6e-58 228.8 138 78.3
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 2.6e-58 228.8 138 78.3
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 2.6e-58 228.8 138 79.0
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 2.6e-58 228.8 138 80.4
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 3.3e-58 228.4 138 79.0
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 4.4e-58 228.0 137 79.6
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 4.4e-58 228.0 137 79.6
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 4.4e-58 228.0 137 79.6
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 4.4e-58 228.0 137 79.6
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 5.7e-58 227.6 138 81.2
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 5.7e-58 227.6 137 78.8
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 5.7e-58 227.6 138 79.0
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 7.4e-58 227.3 138 79.0
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 9.7e-58 226.9 138 77.5
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 1.3e-57 226.5 138 78.3
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 1.3e-57 226.5 137 78.8
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 1.3e-57 226.5 138 79.0
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 1.3e-57 226.5 137 79.6
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 1.7e-57 226.1 138 78.3
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 1.7e-57 226.1 138 79.0
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.7e-57 226.1 138 76.8
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.7e-57 226.1 137 78.1
Cpa.g.sc587.1 Carica papaya HOM05D001670 ORTHO05D002980 2.2e-57 225.7 138 78.3
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 2.8e-57 225.3 137 78.8
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 2.8e-57 225.3 137 78.8
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 2.8e-57 225.3 137 78.8
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 2.8e-57 225.3 137 78.8
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 2.8e-57 225.3 137 78.8
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 2.8e-57 225.3 137 78.8
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 3.7e-57 224.9 137 78.1
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 3.7e-57 224.9 138 77.5
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 3.7e-57 224.9 170 68.2
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 3.7e-57 224.9 138 78.3
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 3.7e-57 224.9 138 77.5
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 4.8e-57 224.6 138 77.5
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 6.3e-57 224.2 151 72.8
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 6.3e-57 224.2 141 79.4
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 6.3e-57 224.2 141 79.4
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 8.2e-57 223.8 140 77.9
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 8.2e-57 223.8 138 77.5
Gohir.D11G082333 Gossypium hirsutum HOM05D001670 ORTHO05D002980 8.2e-57 223.8 138 77.5
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 8.2e-57 223.8 138 77.5
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 8.2e-57 223.8 138 76.8
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 1.1e-56 223.4 147 78.2
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.4e-56 223.0 137 78.1
AUR62013711 Chenopodium quinoa HOM05D001670 ORTHO05D002980 1.8e-56 222.6 138 76.8
Glyma.03G118200 Glycine max HOM05D001670 ORTHO05D002980 1.8e-56 222.6 138 77.5
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 1.8e-56 222.6 138 76.1
Psat4g209440 Pisum sativum HOM05D001670 ORTHO05D002980 1.8e-56 222.6 138 76.1
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 1.8e-56 222.6 138 76.1
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 2.4e-56 222.2 138 76.1
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 3.1e-56 221.9 137 78.8
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 3.1e-56 221.9 137 76.6
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 3.1e-56 221.9 138 75.4
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 7.0e-56 220.7 137 75.9
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 7.0e-56 220.7 137 75.9
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 7.0e-56 220.7 137 75.9
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 7.0e-56 220.7 137 75.9
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 7.0e-56 220.7 137 75.9
A09p69250 Brassica napus HOM05D001670 ORTHO05D002980 9.1e-56 220.3 137 76.6
C08p54070 Brassica napus HOM05D001670 ORTHO05D002980 9.1e-56 220.3 137 76.6
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 9.1e-56 220.3 137 76.6
AUR62004150 Chenopodium quinoa HOM05D001670 ORTHO05D002980 1.2e-55 219.9 138 76.1
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 1.2e-55 219.9 138 75.4
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 3.5e-55 218.4 138 75.4
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 3.5e-55 218.4 138 75.4
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 3.5e-55 218.4 138 76.1
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 3.5e-55 218.4 138 76.8
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 5.9e-55 217.6 137 77.4
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 1.0e-54 216.9 138 75.4
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.3e-54 216.5 137 75.2
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 2.2e-54 215.7 147 75.5
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 6.5e-54 214.2 138 73.2
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 3.2e-53 211.8 130 76.9
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 4.2e-53 211.5 131 77.1
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 4.2e-53 211.5 138 75.4
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 9.4e-53 210.3 138 73.9
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 1.2e-52 209.9 138 75.4
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 1.2e-52 209.9 138 71.7
SHI13576 Sapria himalayana HOM05D001670 ORTHO05D002980 2.7e-52 208.8 151 66.9
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 3.6e-52 208.4 138 72.5
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 1.0e-51 206.8 138 73.2
vmacro06812 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 1.0e-51 206.8 138 71.7
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 5.2e-51 204.5 138 70.3
CSS0024648 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.1e-50 203.4 138 71.0
Os03g0102366 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 1.5e-50 203.0 138 67.4
Actinidia20640 Actinidia chinensis HOM05D001670 ORTHO05D002980 3.3e-50 201.8 123 78.0
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 4.8e-49 198.0 138 68.1
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 3.1e-48 195.3 138 65.9
Thecc.03G154100 Theobroma cacao HOM05D001670 ORTHO05D002980 1.2e-47 193.4 138 70.3
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 2.6e-47 192.2 119 73.9
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 3.6e-44 181.8 139 60.4
BraA09t35680Z Brassica rapa HOM05D001670 ORTHO05D002980 5.2e-43 177.9 137 59.9
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 3.4e-42 175.3 136 61.0
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 1.7e-41 172.9 99 83.8
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 2.8e-41 172.2 99 83.8
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 6.3e-41 171.0 103 73.8
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 8.3e-41 170.6 99 80.8
Haze_02720 Corylus avellana HOM05D001670 ORTHO05D002980 1.4e-40 169.9 99 80.8
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 1.2e-39 166.8 105 75.2
C09p00060 Brassica napus HOM05D001670 ORTHO05D002980 1.6e-39 166.4 137 57.7
Actinidia00132 Actinidia chinensis HOM05D001670 ORTHO05D010670 8.0e-36 154.1 97 74.2
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 2.6e-34 149.1 138 51.4
AagrBONN_evm.TU.Sc2ySwM_362.1757 Anthoceros agrestis HOM05D001670 ORTHO05D002980 1.3e-33 146.7 138 52.9
ECA234G0500 Erigeron canadensis HOM05D001670 ORTHO05D002980 3.7e-33 145.2 137 52.6
vmacro08837 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 8.3e-33 144.1 99 72.7
MD07G1112800 Malus domestica HOM05D001670 ORTHO05D002980 4.1e-32 141.7 84 81.0
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 3.5e-31 138.7 108 65.7
Lj4P515T29 Lonicera japonica HOM05D001670 ORTHO05D010670 6.6e-30 134.4 79 77.2
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 1.0e-27 127.1 133 45.1
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 9.8e-26 120.6 72 81.9
CDE11G1219 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 6.3e-25 117.9 72 80.6
Lsat_1_v5_gn_9_55460 Lactuca sativa HOM05D001670 ORTHO05D016190 2.0e-23 112.8 73 72.6
HanXRQChr16g0519711 Helianthus annuus HOM05D001670 ORTHO05D002980 8.6e-22 107.5 93 51.6
MBI15_g34611_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D010670 3.3e-21 105.5 82 64.6
MBI16_g16201_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D010670 3.3e-21 105.5 54 87.0
Actinidia34078 Actinidia chinensis HOM05D000196 ORTHO05D000279 5.6e-21 104.8 70 70.0
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 9.5e-21 104.0 63 79.4
Actinidia20637 Actinidia chinensis HOM05D001670 ORTHO05D010670 9.8e-18 94.0 138 41.3
Lsat_1_v5_gn_4_47640 Lactuca sativa HOM05D001670 ORTHO05D016190 6.4e-17 91.3 59 74.6
MBI08_g34222_MAGBIO Magnolia biondii HOM05D000942 ORTHO05D010670 2.7e-15 85.9 43 86.0
Actinidia32899 Actinidia chinensis HOM05D005596 ORTHO05D006994 3.0e-14 82.4 85 52.9
Cfa026075 Carpinus fangiana HOM05D001670 ORTHO05D002980 5.6e-13 78.2 139 33.8
Actinidia06366 Actinidia chinensis HOM05D001670 ORTHO05D057084 1.6e-12 76.6 71 59.2
Lsat_1_v5_gn_5_41360 Lactuca sativa HOM05D000207 ORTHO05D016190 9.8e-10 67.4 47 72.3
Lsat_1_v5_gn_5_166380 Lactuca sativa HOM05D001670 ORTHO05D004084 6.0e-07 58.2 49 65.3
Lsat_1_v5_gn_2_15720 Lactuca sativa HOM05D001670 ORTHO05D016190 1.7e-06 56.6 37 73.0


User provided reference genes

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