Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040259 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 2.8e-100 368.6 184 100.0
CSS0008348 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 6.1e-100 367.5 184 99.5
Dinv32030 Davidia involucrata HOM05D005545 ORTHO05D006917 2.5e-61 239.2 173 69.9
Actinidia10163 Actinidia chinensis HOM05D005545 ORTHO05D006917 1.7e-54 216.5 171 67.3
Actinidia10168 Actinidia chinensis HOM05D005545 ORTHO05D006917 6.2e-52 208.0 169 65.7
Hma1.2p1_2114F.1_g314270 Hydrangea macrophylla HOM05D005545 ORTHO05D006917 2.4e-51 206.1 178 66.9
TAR636G1823 Trochodendron aralioides HOM05D005545 ORTHO05D006917 8.1e-44 181.0 179 53.6
Lj9C655T12 Lonicera japonica HOM05D005545 ORTHO05D006917 2.4e-43 179.5 187 55.6
Cfa010879 Carpinus fangiana HOM05D005545 ORTHO05D006917 6.9e-43 177.9 177 55.9
Haze_03077 Corylus avellana HOM05D005545 ORTHO05D006917 5.8e-42 174.9 174 55.2
Nn2g14866 Nelumbo nucifera HOM05D005545 ORTHO05D006917 1.3e-41 173.7 179 52.0
Nn7g36650 Nelumbo nucifera HOM05D005545 ORTHO05D006917 1.7e-41 173.3 182 51.1
vmacro13750 Vaccinium macrocarpon HOM05D005545 ORTHO05D006917 2.9e-41 172.6 175 57.1
GSVIVG01013494001 Vitis vinifera HOM05D005545 ORTHO05D006917 1.9e-40 169.9 174 54.6
Lsat_1_v5_gn_1_115460 Lactuca sativa HOM05D005545 ORTHO05D006917 2.5e-40 169.5 185 54.6
Solyc11g005250.3 Solanum lycopersicum HOM05D005545 ORTHO05D006917 6.0e-39 164.9 176 52.3
Sopen11g001260 Solanum pennellii HOM05D005545 ORTHO05D006917 6.0e-39 164.9 176 52.3
Nitab4.5_0003414g0020 Nicotiana tabacum HOM05D005545 ORTHO05D006917 1.3e-38 163.7 181 51.9
Nitab4.5_0000320g0210 Nicotiana tabacum HOM05D005545 ORTHO05D006917 3.0e-38 162.5 181 52.5
Ciclev10004162m.g Citrus clementina HOM05D005545 ORTHO05D006917 9.6e-37 157.5 174 51.1
Prupe.2G034500 Prunus persica HOM05D005545 ORTHO05D006917 9.6e-37 157.5 181 53.0
MD07G1038300 Malus domestica HOM05D005545 ORTHO05D006917 1.3e-36 157.1 183 51.9
QL04p018188 Quercus lobata HOM05D005545 ORTHO05D006917 1.3e-36 157.1 184 51.1
QL04p014793 Quercus lobata HOM05D005545 ORTHO05D006917 1.6e-36 156.8 184 50.5
CiPaw.13G013000 Carya illinoinensis HOM05D005545 ORTHO05D006917 2.1e-36 156.4 174 51.7
DCAR_003247 Daucus carota HOM05D005545 ORTHO05D006917 3.7e-36 155.6 174 51.1
Cc00_g05310 Coffea canephora HOM05D005545 ORTHO05D006917 4.8e-36 155.2 168 54.2
ClCG05G026770 Citrullus lanatus HOM05D005545 ORTHO05D006917 6.2e-36 154.8 201 45.8
Carub.0005s2108 Capsella rubella HOM05D005545 ORTHO05D006917 1.1e-35 154.1 204 44.6
COL.COLO4_21694 Corchorus olitorius HOM05D005545 ORTHO05D006917 1.4e-35 153.7 174 49.4
Lalb_Chr04g0264091 Lupinus albus HOM05D005545 ORTHO05D006917 1.8e-35 153.3 183 45.9
TWI63G0062 Tripterygium wilfordii HOM05D005545 ORTHO05D006917 1.8e-35 153.3 178 50.6
Atru.chr12.1348 Acer truncatum HOM05D005545 ORTHO05D006917 3.1e-35 152.5 184 48.4
Sed0011144 Sechium edule HOM05D005545 ORTHO05D006917 4.1e-35 152.1 194 49.0
AT3G54460 Arabidopsis thaliana HOM05D005545 ORTHO05D006917 1.5e-34 150.2 203 45.3
Thhalv10010067m.g Eutrema salsugineum HOM05D005545 ORTHO05D006917 4.5e-34 148.7 212 42.5
Thecc.10G162000 Theobroma cacao HOM05D005545 ORTHO05D006917 7.6e-34 147.9 168 47.6
MD02G1288500 Malus domestica HOM05D005545 ORTHO05D006917 1.7e-33 146.7 182 47.8
SalBow5G5421 Salvia bowleyana HOM05D005545 ORTHO05D006917 1.7e-33 146.7 175 46.9
Manes.04G160000 Manihot esculenta HOM05D005545 ORTHO05D006917 2.2e-33 146.4 167 49.1
AL5G35510 Arabidopsis lyrata HOM05D005545 ORTHO05D006917 2.9e-33 146.0 198 43.4
PGR044G1070 Punica granatum HOM05D005545 ORTHO05D006917 2.9e-33 146.0 220 41.4
MSTRG.20517 Avicennia marina HOM05D005545 ORTHO05D006917 5.0e-33 145.2 178 46.6
HanXRQChr11g0341811 Helianthus annuus HOM05D005545 ORTHO05D006917 5.0e-33 145.2 182 48.9
Ca_19084_v3 Cicer arietinum L. HOM05D005545 ORTHO05D006917 1.1e-32 144.1 176 48.9
Rhsim07G0066900 Rhododendron simsii HOM05D005545 ORTHO05D006917 1.1e-32 144.1 192 50.0
MELO3C012467.2 Cucumis melo HOM05D005545 ORTHO05D006917 1.9e-32 143.3 198 43.9
CsaV3_5G036710 Cucumis sativus L. HOM05D005545 ORTHO05D006917 1.9e-32 143.3 198 44.9
Oeu040901.1 Olea europaea HOM05D005545 ORTHO05D006917 7.2e-32 141.4 181 43.6
Sp5g07960 Schrenkiella parvula HOM05D005545 ORTHO05D006917 1.6e-31 140.2 213 40.8
Aa31sc35G110 Aethionema arabicum HOM05D005545 ORTHO05D006917 2.1e-31 139.8 211 40.3
THA.LOC104824192 Tarenaya hassleriana HOM05D005545 ORTHO05D006917 4.6e-31 138.7 201 40.8
arahy.Tifrunner.gnm1.ann1.3MZP5F Arachis hypogaea HOM05D005545 ORTHO05D006917 6.1e-31 138.3 177 44.6
Sabra03G0147100 Salix brachista HOM05D005545 ORTHO05D006917 7.9e-31 137.9 192 44.3
Glyma.11G154800 Glycine max HOM05D005545 ORTHO05D006917 1.0e-30 137.5 176 44.3
Gohir.D04G014900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 1.0e-30 137.5 167 47.9
Gorai.012G017400 Gossypium raimondii HOM05D005545 ORTHO05D006917 1.0e-30 137.5 167 47.9
Phvul.005G027400 Phaseolus vulgaris HOM05D005545 ORTHO05D006917 1.0e-30 137.5 175 47.4
arahy.Tifrunner.gnm1.ann1.598UNF Arachis hypogaea HOM05D005545 ORTHO05D006917 1.3e-30 137.1 178 43.8
Duzib114G0439 Durio zibethinus HOM05D005545 ORTHO05D006917 1.3e-30 137.1 166 46.4
SGA_v2.0_scaffold319G48544 Striga asiatica HOM05D005545 ORTHO05D006917 1.8e-30 136.7 175 44.0
Aqoxy2G00348 Aquilegia oxysepala HOM05D005545 ORTHO05D006917 3.0e-30 136.0 176 43.2
BraA04t16237Z Brassica rapa HOM05D005545 ORTHO05D006917 3.9e-30 135.6 180 43.3
Hund15735 Selenicereus undatus HOM05D005545 ORTHO05D006917 5.1e-30 135.2 177 46.9
arahy.Tifrunner.gnm1.ann1.HR7PRR Arachis hypogaea HOM05D005545 ORTHO05D006917 6.7e-30 134.8 176 43.8
CDE12G0276 Ceratophyllum demersum HOM05D005545 ORTHO05D006917 6.7e-30 134.8 179 44.1
FAN03G2070 Fragaria x ananassa HOM05D005545 ORTHO05D006917 6.7e-30 134.8 182 48.9
Glyma.04G138300 Glycine max HOM05D005545 ORTHO05D006917 6.7e-30 134.8 176 43.2
VMungo1080G1303 Vigna mungo HOM05D005545 ORTHO05D006917 8.7e-30 134.4 177 45.8
CAN.G1074.9 Capsicum annuum HOM05D005545 ORTHO05D006917 1.5e-29 133.7 184 48.4
SGA_v2.0_scaffold124G33619 Striga asiatica HOM05D005545 ORTHO05D006917 1.5e-29 133.7 170 42.9
A04p05370 Brassica napus HOM05D005545 ORTHO05D006917 2.5e-29 132.9 180 42.8
BolC4t25380H Brassica oleracea HOM05D005545 ORTHO05D006917 5.7e-29 131.7 193 42.5
Psat5g217720 Pisum sativum HOM05D005545 ORTHO05D006917 9.7e-29 131.0 173 45.7
Potri.T125006 Populus trichocarpa HOM05D005545 ORTHO05D006917 1.6e-28 130.2 193 44.6
RcHm_v2.0_Chr1g0323901 Rosa chinensis HOM05D005545 ORTHO05D006917 2.2e-28 129.8 177 48.0
Potri.003G197701 Populus trichocarpa HOM05D005545 ORTHO05D006917 2.8e-28 129.4 193 44.0
TPR.G17827 Trifolium pratense HOM05D005545 ORTHO05D006917 2.8e-28 129.4 174 44.3
BcaC02g09068 Brassica carinata HOM05D005545 ORTHO05D006917 3.7e-28 129.0 193 42.5
C04p38060 Brassica napus HOM05D005545 ORTHO05D006917 3.7e-28 129.0 193 42.5
FAN06G4324 Fragaria x ananassa HOM05D005545 ORTHO05D006917 6.3e-28 128.3 179 46.9
PSO384G2575 Papaver somniferum HOM05D005545 ORTHO05D006917 2.4e-27 126.3 177 42.4
Medtr3g017390 Medicago truncatula HOM05D005545 ORTHO05D006917 3.1e-27 125.9 172 42.4
CANSAT56G1029 Cannabis sativa HOM05D005545 ORTHO05D006917 1.2e-26 124.0 190 42.1
Migut.B01225 Erythranthe guttata HOM05D005545 ORTHO05D006917 1.2e-26 124.0 172 40.7
HPP92_001016 Vanilla planifolia HOM05D005545 ORTHO05D006917 1.5e-26 123.6 172 41.9
Ah.12g062880 Amaranthus hybridus HOM05D005545 ORTHO05D006917 1.7e-25 120.2 179 39.7
Sc10g0004410 Simmondsia chinensis HOM05D005545 ORTHO05D006917 2.2e-25 119.8 169 43.2
CAN.G694.97 Capsicum annuum HOM05D001043 ORTHO05D001555 2.9e-25 119.4 208 43.3
ATR0745G085 Amborella trichopoda HOM05D005545 ORTHO05D006917 5.5e-24 115.2 172 37.2
SHI03991 Sapria himalayana HOM05D005545 ORTHO05D006917 6.1e-23 111.7 165 44.8
EL10Ac2g02815 Beta vulgaris HOM05D005545 ORTHO05D006917 7.9e-23 111.3 179 44.1
Peaxi162Scf00025g01520 Petunia axillaris HOM05D005545 ORTHO05D006917 1.5e-21 107.1 79 68.4
Lj3g0017403 Lotus japonicus HOM05D005545 ORTHO05D006917 1.1e-19 100.9 176 39.2
AUR62037185 Chenopodium quinoa HOM05D005545 ORTHO05D006917 1.4e-19 100.5 180 37.2
CARHR164360 Cardamine hirsuta HOM05D005545 ORTHO05D006917 6.9e-19 98.2 73 63.0
unitig_749.g13482 Utricularia gibba HOM05D005545 ORTHO05D006917 4.4e-13 79.0 82 48.8
Os01g0952200 Oryza sativa ssp. japonica HOM05D005545 ORTHO05D006917 7.0e-11 71.6 87 48.3
Zm00001eb140820 Zea mays HOM05D005545 ORTHO05D006917 1.3e-09 67.4 75 45.3
Zm00001eb140840 Zea mays HOM05D005545 ORTHO05D006917 3.8e-09 65.9 78 43.6
AUR62026877 Chenopodium quinoa HOM05D005545 ORTHO05D006917 5.5e-08 62.0 60 55.0
Eucgr.J01185 Eucalyptus grandis HOM05D005545 ORTHO05D006917 7.2e-08 61.6 185 30.8


User provided reference genes

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