Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039124 Camellia sinensis var. sinensis HOM05D005043 ORTHO05D006182 1.8e-81 305.8 147 100.0
vmacro11941 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 5.2e-25 118.2 70 80.0
vmacro23385 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 5.2e-25 118.2 70 80.0
vmacro23467 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 5.2e-25 118.2 70 80.0
Oeu031030.1 Olea europaea HOM05D005043 ORTHO05D006182 4.4e-24 115.2 70 77.1
A05p34520 Brassica napus HOM05D005043 ORTHO05D006182 5.7e-24 114.8 68 79.4
BolC5t33915H Brassica oleracea HOM05D005043 ORTHO05D006182 5.7e-24 114.8 68 79.4
BraA05t22272Z Brassica rapa HOM05D005043 ORTHO05D006182 5.7e-24 114.8 68 79.4
Atru.chr2.2132 Acer truncatum HOM05D005043 ORTHO05D006182 9.8e-24 114.0 70 77.1
Cpa.g.sc77.9 Carica papaya HOM05D005043 ORTHO05D006182 1.3e-23 113.6 115 53.9
Potri.001G390500 Populus trichocarpa HOM05D005043 ORTHO05D006182 1.3e-23 113.6 70 75.7
Hma1.2p1_0290F.1_g114850 Hydrangea macrophylla HOM05D005043 ORTHO05D006182 1.7e-23 113.2 70 74.3
BcaB06g25330 Brassica carinata HOM05D005043 ORTHO05D006182 2.2e-23 112.8 68 77.9
Glyma.12G157700 Glycine max HOM05D005043 ORTHO05D006182 2.8e-23 112.5 69 78.3
Dinv18365 Davidia involucrata HOM05D005043 ORTHO05D006182 3.7e-23 112.1 65 80.0
Duzib213G0837 Durio zibethinus HOM05D005043 ORTHO05D006182 4.8e-23 111.7 70 72.9
Glyma.06G229100 Glycine max HOM05D005043 ORTHO05D006182 4.8e-23 111.7 71 74.6
Gohir.A01G054300 Gossypium hirsutum HOM05D005043 ORTHO05D006182 4.8e-23 111.7 70 74.3
Gohir.D01G042722 Gossypium hirsutum HOM05D005043 ORTHO05D006182 4.8e-23 111.7 70 72.9
Gorai.002G054600 Gossypium raimondii HOM05D005043 ORTHO05D006182 4.8e-23 111.7 70 72.9
GSVIVG01014196001 Vitis vinifera HOM05D005043 ORTHO05D006182 4.8e-23 111.7 70 74.3
Ciclev10023741m.g Citrus clementina HOM05D005043 ORTHO05D006182 6.3e-23 111.3 70 75.7
FAN25G1853 Fragaria x ananassa HOM05D005043 ORTHO05D006182 6.3e-23 111.3 71 76.1
Prupe.4G164600 Prunus persica HOM05D005043 ORTHO05D006182 6.3e-23 111.3 62 82.3
Thecc.07G117100 Theobroma cacao HOM05D005043 ORTHO05D006182 6.3e-23 111.3 70 74.3
BcaB06g29516 Brassica carinata HOM05D005043 ORTHO05D006182 8.3e-23 110.9 68 76.5
BcaNung07105 Brassica carinata HOM05D005043 ORTHO05D006182 8.3e-23 110.9 67 79.1
C05p52260 Brassica napus HOM05D005043 ORTHO05D006182 8.3e-23 110.9 68 76.5
BolC3t17001H Brassica oleracea HOM05D005043 ORTHO05D006182 8.3e-23 110.9 67 79.1
FAN21G3659 Fragaria x ananassa HOM05D005043 ORTHO05D006182 8.3e-23 110.9 64 78.1
VMungo1127G0129 Vigna mungo HOM05D005043 ORTHO05D006182 8.3e-23 110.9 70 75.7
MBI06_g29324_MAGBIO Magnolia biondii HOM05D005043 ORTHO05D006182 1.1e-22 110.5 70 75.7
Phvul.011G162300 Phaseolus vulgaris HOM05D005043 ORTHO05D006182 1.1e-22 110.5 70 75.7
TPR.G12585 Trifolium pratense HOM05D005043 ORTHO05D006182 1.1e-22 110.5 70 77.1
Lj3g0009561 Lotus japonicus HOM05D005043 ORTHO05D006182 1.4e-22 110.2 70 75.7
Ca_26224_v3 Cicer arietinum L. HOM05D005043 ORTHO05D006182 1.8e-22 109.8 69 73.9
Rhsim06G0208200 Rhododendron simsii HOM05D005043 ORTHO05D006182 2.4e-22 109.4 70 74.3
A03p39040 Brassica napus HOM05D005043 ORTHO05D006182 3.1e-22 109.0 67 77.6
BraA03t13053Z Brassica rapa HOM05D005043 ORTHO05D006182 3.1e-22 109.0 67 77.6
FvH4_3g18270 Fragaria vesca HOM05D005043 ORTHO05D006182 3.1e-22 109.0 64 76.6
TAR636G1993 Trochodendron aralioides HOM05D005043 ORTHO05D006182 3.1e-22 109.0 70 75.7
Medtr6g466500 Medicago truncatula HOM05D005043 ORTHO05D006182 4.1e-22 108.6 70 74.3
Nn7g37328 Nelumbo nucifera HOM05D005043 ORTHO05D006182 4.1e-22 108.6 62 82.3
FAN11G3478 Fragaria x ananassa HOM05D005043 ORTHO05D006182 5.4e-22 108.2 64 75.0
FAN16G3394 Fragaria x ananassa HOM05D005043 ORTHO05D006182 5.4e-22 108.2 64 75.0
MD11G1263900 Malus domestica HOM05D005043 ORTHO05D006182 5.4e-22 108.2 62 80.6
C03p47310 Brassica napus HOM05D005043 ORTHO05D006182 7.0e-22 107.8 67 77.6
COL.COLO4_17542 Corchorus olitorius HOM05D005043 ORTHO05D006182 7.0e-22 107.8 70 74.3
Manes.15G094900 Manihot esculenta HOM05D005043 ORTHO05D006182 7.0e-22 107.8 64 78.1
Thhalv10020510m.g Eutrema salsugineum HOM05D005043 ORTHO05D006182 9.1e-22 107.5 67 76.1
RcHm_v2.0_Chr5g0030901 Rosa chinensis HOM05D005043 ORTHO05D006182 1.2e-21 107.1 64 75.0
AL3G27210 Arabidopsis lyrata HOM05D005043 ORTHO05D006182 1.6e-21 106.7 67 76.1
Lalb_Chr19g0133801 Lupinus albus HOM05D005043 ORTHO05D006182 1.6e-21 106.7 59 81.4
Sp3g13100 Schrenkiella parvula HOM05D005043 ORTHO05D006182 1.6e-21 106.7 67 77.6
THA.LOC104822566 Tarenaya hassleriana HOM05D005043 ORTHO05D006182 2.0e-21 106.3 65 75.4
Aa31LG8G2100 Aethionema arabicum HOM05D005043 ORTHO05D006182 3.5e-21 105.5 69 73.9
AT3G14890 Arabidopsis thaliana HOM05D005043 ORTHO05D006182 3.5e-21 105.5 67 74.6
Eucgr.F01242 Eucalyptus grandis HOM05D005043 ORTHO05D006182 3.5e-21 105.5 70 70.0
TWI38G0078 Tripterygium wilfordii HOM05D005043 ORTHO05D006182 3.5e-21 105.5 67 73.1
CDE09G1444 Ceratophyllum demersum HOM05D005043 ORTHO05D006182 4.5e-21 105.1 56 85.7
SalBow1G3547 Salvia bowleyana HOM05D005043 ORTHO05D006182 4.5e-21 105.1 58 84.5
SalBow8G1024 Salvia bowleyana HOM05D005043 ORTHO05D006182 4.5e-21 105.1 58 84.5
Carub.0003s1455 Capsella rubella HOM05D005043 ORTHO05D006182 5.9e-21 104.8 60 80.0
PGR083G1657 Punica granatum HOM05D005043 ORTHO05D006182 5.9e-21 104.8 70 71.4
QL08p026221 Quercus lobata HOM05D005043 ORTHO05D006182 7.7e-21 104.4 69 72.5
Sabra16G0255900 Salix brachista HOM05D005043 ORTHO05D006182 7.7e-21 104.4 70 68.6
Lj1C829T6 Lonicera japonica HOM05D005043 ORTHO05D006182 1.0e-20 104.0 70 70.0
EL10Ac4g08345 Beta vulgaris HOM05D005043 ORTHO05D006182 2.9e-20 102.4 65 72.3
CANSAT35G1445 Cannabis sativa HOM05D005043 ORTHO05D006182 2.9e-20 102.4 59 76.3
Haze_09322 Corylus avellana HOM05D005043 ORTHO05D006182 3.8e-20 102.1 71 67.6
Lalb_Chr03g0031161 Lupinus albus HOM05D005043 ORTHO05D006182 3.8e-20 102.1 65 73.8
Sopen07g030670 Solanum pennellii HOM05D005043 ORTHO05D006182 3.8e-20 102.1 70 67.1
arahy.Tifrunner.gnm1.ann1.5E18AM Arachis hypogaea HOM05D005043 ORTHO05D006182 8.6e-20 100.9 62 72.6
arahy.Tifrunner.gnm1.ann1.NUK3H0 Arachis hypogaea HOM05D005043 ORTHO05D006182 8.6e-20 100.9 62 72.6
SGA_v2.0_scaffold70G23376 Striga asiatica HOM05D005043 ORTHO05D006182 8.6e-20 100.9 72 69.4
ECA240G3232 Erigeron canadensis HOM05D005043 ORTHO05D006182 1.9e-19 99.8 67 68.7
Migut.M00727 Erythranthe guttata HOM05D005043 ORTHO05D006182 1.9e-19 99.8 55 83.6
HanXRQChr13g0390281 Helianthus annuus HOM05D005043 ORTHO05D006182 1.9e-19 99.8 67 65.7
MSTRG.12865 Avicennia marina HOM05D005043 ORTHO05D006182 2.5e-19 99.4 64 70.3
ClCG11G017440 Citrullus lanatus HOM05D005043 ORTHO05D006182 3.3e-19 99.0 70 67.1
CsaV3_4G033100 Cucumis sativus L. HOM05D005043 ORTHO05D006182 3.3e-19 99.0 69 69.6
HanXRQChr12g0362951 Helianthus annuus HOM05D005043 ORTHO05D006182 3.3e-19 99.0 57 75.4
PSO782G2110 Papaver somniferum HOM05D005043 ORTHO05D006182 3.3e-19 99.0 68 67.6
PGSC0003DMG400007070 Solanum tuberosum HOM05D005043 ORTHO05D006182 3.3e-19 99.0 70 64.3
unitig_749.g13541 Utricularia gibba HOM05D005043 ORTHO05D006182 3.3e-19 99.0 81 56.8
PSO478G3490 Papaver somniferum HOM05D005043 ORTHO05D006182 4.2e-19 98.6 68 67.6
CAN.G375.16 Capsicum annuum HOM05D005043 ORTHO05D006182 7.2e-19 97.8 70 65.7
ATR1131G028 Amborella trichopoda HOM05D005043 ORTHO05D006182 1.2e-18 97.1 62 69.4
MELO3C025641.2 Cucumis melo HOM05D005043 ORTHO05D006182 1.2e-18 97.1 69 68.1
Sed0006465 Sechium edule HOM05D005043 ORTHO05D006182 1.6e-18 96.7 71 67.6
Peaxi162Scf00111g01457 Petunia axillaris HOM05D005043 ORTHO05D006182 2.1e-18 96.3 70 62.9
AUR62019576 Chenopodium quinoa HOM05D005043 ORTHO05D006182 4.7e-18 95.1 65 66.2
DCAR_017172 Daucus carota HOM05D005043 ORTHO05D006182 4.7e-18 95.1 70 62.9
Solyc07g062430.3 Solanum lycopersicum HOM05D005043 ORTHO05D006182 6.1e-18 94.7 70 62.9
Cc05_g11070 Coffea canephora HOM05D005043 ORTHO05D006182 8.0e-18 94.4 102 48.0
PSO384G1010 Papaver somniferum HOM05D005043 ORTHO05D006182 1.0e-17 94.0 64 68.8
CARHR089830 Cardamine hirsuta HOM05D005043 ORTHO05D006182 1.4e-17 93.6 94 55.3
Lsat_1_v5_gn_9_99860 Lactuca sativa HOM05D005043 ORTHO05D006182 2.3e-17 92.8 58 70.7
CiPaw.11G160200 Carya illinoinensis HOM05D005043 ORTHO05D006182 5.2e-17 91.7 70 62.9
Sc16g0007590 Simmondsia chinensis HOM05D005043 ORTHO05D006182 8.9e-17 90.9 131 43.5
Actinidia09808 Actinidia chinensis HOM05D005043 ORTHO05D006182 1.2e-16 90.5 108 49.1
AUR62042782 Chenopodium quinoa HOM05D005043 ORTHO05D006182 2.0e-16 89.7 64 64.1
arahy.Tifrunner.gnm1.ann1.3VV2Z3 Arachis hypogaea HOM05D005043 ORTHO05D006182 2.6e-16 89.4 57 70.2
Aqoxy7G03872 Aquilegia oxysepala HOM05D005043 ORTHO05D006182 9.8e-16 87.4 58 67.2
Os01g0737300 Oryza sativa ssp. japonica HOM05D005043 ORTHO05D006182 9.8e-16 87.4 61 67.2
Nitab4.5_0006953g0040 Nicotiana tabacum HOM05D005043 ORTHO05D006182 1.3e-15 87.0 68 61.8
SEGI_01303 Sequoiadendron giganteum HOM05D005043 ORTHO05D006182 2.8e-15 85.9 56 73.2
Medtr6g052005 Medicago truncatula HOM05D005043 ORTHO05D006182 2.4e-14 82.8 44 84.1
AagrBONN_evm.TU.Sc2ySwM_228.1872 Anthoceros agrestis HOM05D005043 ORTHO05D006182 5.2e-09 65.1 57 59.6
Pp3c6_17140 Physcomitrium patens HOM05D005043 ORTHO05D006182 8.9e-09 64.3 56 58.9
CBR_g66772 Chara braunii HOM05D005043 ORTHO05D006182 3.4e-08 62.4 83 44.6
Mapoly0056s0069 Marchantia polymorpha HOM05D005043 ORTHO05D006182 3.7e-07 58.9 85 41.2
SMO137G0206 Selaginella moellendorffii HOM05D005043 ORTHO05D006182 1.4e-06 57.0 45 57.8


User provided reference genes

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