Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038991 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 6.8e-142 507.3 254 100.0
CSS0002209 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 2.6e-133 478.8 253 94.9
Rhsim13G0198600 Rhododendron simsii HOM05D005380 ORTHO05D006601 7.6e-125 450.7 254 87.4
Dinv01434 Davidia involucrata HOM05D005380 ORTHO05D006601 2.2e-124 449.1 252 88.5
GSVIVG01013627001 Vitis vinifera HOM05D005380 ORTHO05D006601 3.3e-120 435.3 253 85.8
MD10G1238900 Malus domestica HOM05D005380 ORTHO05D006601 7.4e-120 434.1 253 83.8
vmacro04057 Vaccinium macrocarpon HOM05D005380 ORTHO05D006601 1.4e-118 429.9 290 76.2
RcHm_v2.0_Chr5g0019211 Rosa chinensis HOM05D005380 ORTHO05D006601 3.1e-118 428.7 254 82.7
MBI10_g16336_MAGBIO Magnolia biondii HOM05D005380 ORTHO05D006601 4.0e-118 428.3 254 83.1
Hma1.2p1_1380F.1_g279310 Hydrangea macrophylla HOM05D005380 ORTHO05D006601 6.9e-118 427.6 252 83.3
Prupe.4G105500 Prunus persica HOM05D005380 ORTHO05D006601 6.9e-118 427.6 253 81.8
Manes.11G052180 Manihot esculenta HOM05D005380 ORTHO05D006601 1.5e-117 426.4 253 83.8
Manes.16G057200 Manihot esculenta HOM05D005380 ORTHO05D006601 2.9e-116 422.2 253 83.0
Atru.chr10.626 Acer truncatum HOM05D005380 ORTHO05D006601 1.1e-115 420.2 253 81.8
Atru.chr10.630_Atru.chr10.631 Acer truncatum HOM05D005380 ORTHO05D006601 1.1e-115 420.2 253 81.8
TWI09G1549 Tripterygium wilfordii HOM05D005380 ORTHO05D006601 1.1e-115 420.2 253 82.2
TAR365G0677 Trochodendron aralioides HOM05D005380 ORTHO05D006601 1.1e-115 420.2 253 83.0
FvH4_3g11790 Fragaria vesca HOM05D005380 ORTHO05D006601 3.2e-115 418.7 252 81.3
COL.COLO4_30926 Corchorus olitorius HOM05D005380 ORTHO05D006601 4.2e-115 418.3 253 82.6
Thecc.06G135400 Theobroma cacao HOM05D005380 ORTHO05D006601 4.2e-115 418.3 253 83.0
Potri.001G081900 Populus trichocarpa HOM05D005380 ORTHO05D006601 5.5e-115 417.9 253 80.6
QL11p017903 Quercus lobata HOM05D005380 ORTHO05D006601 1.2e-114 416.8 254 79.5
Gorai.011G051400 Gossypium raimondii HOM05D005380 ORTHO05D006601 2.1e-114 416.0 252 82.1
Cfa000719 Carpinus fangiana HOM05D005380 ORTHO05D006601 4.6e-114 414.8 253 81.0
Duzib192G0856 Durio zibethinus HOM05D005380 ORTHO05D006601 4.6e-114 414.8 253 82.6
Potri.003G148700 Populus trichocarpa HOM05D005380 ORTHO05D006601 4.6e-114 414.8 253 80.2
Ciclev10014143m.g Citrus clementina HOM05D005380 ORTHO05D006601 1.0e-113 413.7 253 81.4
FAN21G3255 Fragaria x ananassa HOM05D005380 ORTHO05D006601 1.0e-113 413.7 252 80.2
Nn1g01426 Nelumbo nucifera HOM05D005380 ORTHO05D006601 1.0e-113 413.7 251 80.9
Gohir.D10G048301 Gossypium hirsutum HOM05D005380 ORTHO05D006601 1.3e-113 413.3 252 81.3
FAN16G1170 Fragaria x ananassa HOM05D005380 ORTHO05D006601 2.3e-113 412.5 252 80.2
HanXRQChr14g0457361 Helianthus annuus HOM05D005380 ORTHO05D006601 3.0e-113 412.1 253 80.2
Lsat_1_v5_gn_4_38401 Lactuca sativa HOM05D005380 ORTHO05D006601 3.0e-113 412.1 254 80.7
Sabra03G0108200 Salix brachista HOM05D005380 ORTHO05D006601 1.1e-112 410.2 253 79.4
FAN25G3771 Fragaria x ananassa HOM05D005380 ORTHO05D006601 1.5e-112 409.8 255 79.2
Oeu000486.1 Olea europaea HOM05D005380 ORTHO05D006601 1.9e-112 409.5 250 80.0
CSS0007558 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 7.4e-112 407.5 253 83.4
ECA234G0325 Erigeron canadensis HOM05D005380 ORTHO05D006601 1.6e-111 406.4 254 79.5
Sopen05g010460 Solanum pennellii HOM05D005380 ORTHO05D006601 4.8e-111 404.8 252 79.8
Eucgr.E02010 Eucalyptus grandis HOM05D005380 ORTHO05D006601 8.2e-111 404.1 252 79.4
CAN.G890.49 Capsicum annuum HOM05D005380 ORTHO05D006601 1.8e-110 402.9 252 79.4
Cc09_g06540 Coffea canephora HOM05D005380 ORTHO05D006601 1.8e-110 402.9 243 82.3
Solyc05g015210.4 Solanum lycopersicum HOM05D005380 ORTHO05D006601 1.8e-110 402.9 251 79.7
Aqoxy5G03588 Aquilegia oxysepala HOM05D005380 ORTHO05D006601 2.4e-110 402.5 252 78.6
ECA247G3537 Erigeron canadensis HOM05D005380 ORTHO05D006601 5.3e-110 401.4 253 79.1
Lj3g0005152 Lotus japonicus HOM05D005380 ORTHO05D006601 5.3e-110 401.4 253 77.9
DCAR_003768 Daucus carota HOM05D005380 ORTHO05D006601 6.9e-110 401.0 254 77.2
Ca_23214_v3 Cicer arietinum L. HOM05D005380 ORTHO05D006601 9.0e-110 400.6 253 77.5
MD05G1259300 Malus domestica HOM05D005380 ORTHO05D006601 2.0e-109 399.4 306 67.3
Glyma.07G119900 Glycine max HOM05D005380 ORTHO05D006601 3.4e-109 398.7 254 77.2
Lalb_Chr07g0194321 Lupinus albus HOM05D005380 ORTHO05D006601 4.5e-109 398.3 252 77.8
SalBow8G2602 Salvia bowleyana HOM05D005380 ORTHO05D006601 4.5e-109 398.3 252 77.8
SalBow8G4959 Salvia bowleyana HOM05D005380 ORTHO05D006601 4.5e-109 398.3 252 77.8
VMungo0331G1684 Vigna mungo HOM05D005380 ORTHO05D006601 4.5e-109 398.3 253 77.5
Duzib235G1486 Durio zibethinus HOM05D005380 ORTHO05D006601 5.9e-109 397.9 249 79.1
Glyma.03G103900 Glycine max HOM05D005380 ORTHO05D006601 5.9e-109 397.9 254 76.8
Haze_06032 Corylus avellana HOM05D005380 ORTHO05D006601 1.0e-108 397.1 274 73.4
Medtr8g012560 Medicago truncatula HOM05D005380 ORTHO05D006601 1.0e-108 397.1 253 78.3
PGR083G1975 Punica granatum HOM05D005380 ORTHO05D006601 1.0e-108 397.1 252 77.8
TPR.G31565 Trifolium pratense HOM05D005380 ORTHO05D006601 1.0e-108 397.1 253 78.3
CANSAT80G1059 Cannabis sativa HOM05D005380 ORTHO05D006601 1.3e-108 396.7 252 77.0
CiPaw.10G065000 Carya illinoinensis HOM05D005380 ORTHO05D006601 2.2e-108 396.0 253 77.1
PSO170G0871 Papaver somniferum HOM05D005380 ORTHO05D006601 3.8e-108 395.2 254 74.4
PSO357G0674 Papaver somniferum HOM05D005380 ORTHO05D006601 3.8e-108 395.2 254 74.4
Peaxi162Scf00128g01143 Petunia axillaris HOM05D005380 ORTHO05D006601 3.8e-108 395.2 260 75.4
Phvul.010G053600 Phaseolus vulgaris HOM05D005380 ORTHO05D006601 3.8e-108 395.2 253 76.7
arahy.Tifrunner.gnm1.ann1.GT0B0E Arachis hypogaea HOM05D005380 ORTHO05D006601 1.1e-107 393.7 252 77.0
arahy.Tifrunner.gnm1.ann1.UEF6CF Arachis hypogaea HOM05D005380 ORTHO05D006601 1.1e-107 393.7 252 77.0
MSTRG.12176 Avicennia marina HOM05D005380 ORTHO05D006601 2.5e-107 392.5 245 78.4
EL10Ac8g19470 Beta vulgaris HOM05D005380 ORTHO05D006601 2.5e-107 392.5 254 76.4
Nitab4.5_0002174g0030 Nicotiana tabacum HOM05D005380 ORTHO05D006601 2.5e-107 392.5 257 77.0
Nitab4.5_0005179g0030 Nicotiana tabacum HOM05D005380 ORTHO05D006601 7.2e-107 391.0 257 77.0
Hund06739 Selenicereus undatus HOM05D005380 ORTHO05D006601 2.1e-106 389.4 252 74.6
Migut.M01950 Erythranthe guttata HOM05D005380 ORTHO05D006601 6.1e-106 387.9 247 77.7
HPP92_023728 Vanilla planifolia HOM05D005380 ORTHO05D006601 3.0e-105 385.6 251 74.1
Thhalv10006692m.g Eutrema salsugineum HOM05D005380 ORTHO05D006601 3.9e-105 385.2 252 74.2
BcaB07g32281 Brassica carinata HOM05D005380 ORTHO05D006601 5.1e-105 384.8 252 75.4
Aa31LG7G6850 Aethionema arabicum HOM05D005380 ORTHO05D006601 1.9e-104 382.9 252 74.6
ATR0743G092 Amborella trichopoda HOM05D005380 ORTHO05D006601 1.9e-104 382.9 253 75.9
MELO3C021785.2 Cucumis melo HOM05D005380 ORTHO05D006601 1.9e-104 382.9 252 73.8
BolC5t30892H Brassica oleracea HOM05D003679 ORTHO05D004265 2.5e-104 382.5 252 75.0
BcaC05g26192 Brassica carinata HOM05D005380 ORTHO05D006601 7.4e-104 380.9 252 74.6
CsaV3_1G046710 Cucumis sativus L. HOM05D005380 ORTHO05D006601 9.7e-104 380.6 247 74.5
Sc10g0009350 Simmondsia chinensis HOM05D005380 ORTHO05D006601 9.7e-104 380.6 252 74.6
BraA09t39678Z Brassica rapa HOM05D005380 ORTHO05D006601 1.3e-103 380.2 252 74.6
SGA_v2.0_scaffold223G42899 Striga asiatica HOM05D005380 ORTHO05D006601 1.6e-103 379.8 253 72.7
A09p41900 Brassica napus HOM05D005380 ORTHO05D006601 2.2e-103 379.4 252 74.6
THA.LOC104810347 Tarenaya hassleriana HOM05D005380 ORTHO05D006601 3.7e-103 378.6 252 73.8
Sp1g20340 Schrenkiella parvula HOM05D005380 ORTHO05D006601 4.8e-103 378.3 249 74.3
C05p21950 Brassica napus HOM05D005380 ORTHO05D006601 6.3e-103 377.9 252 74.2
AUR62042012 Chenopodium quinoa HOM05D005380 ORTHO05D006601 6.3e-103 377.9 252 73.4
AL1G36400 Arabidopsis lyrata HOM05D005380 ORTHO05D006601 1.4e-102 376.7 253 72.7
Carub.0001s2236 Capsella rubella HOM05D005380 ORTHO05D006601 2.4e-102 375.9 252 72.2
Psat4g204440 Pisum sativum HOM05D005380 ORTHO05D006601 4.1e-102 375.2 266 72.9
CARHR023210 Cardamine hirsuta HOM05D005380 ORTHO05D006601 2.0e-101 372.9 252 71.8
AT1G22860 Arabidopsis thaliana HOM05D005380 ORTHO05D006601 1.3e-100 370.2 252 71.4
CDE02G1822 Ceratophyllum demersum HOM05D005380 ORTHO05D006601 2.2e-100 369.4 250 72.8
Os05g0104100 Oryza sativa ssp. japonica HOM05D005380 ORTHO05D006601 2.2e-100 369.4 252 71.0
Zm00001eb267510 Zea mays HOM05D005380 ORTHO05D006601 5.0e-100 368.2 252 70.6
Ah.14g085840 Amaranthus hybridus HOM05D005380 ORTHO05D006601 2.5e-99 365.9 281 66.2
Sed0014613 Sechium edule HOM05D005380 ORTHO05D006601 2.1e-98 362.8 252 69.8
QL05p013204 Quercus lobata HOM05D005380 ORTHO05D006601 1.7e-87 326.6 230 71.3
AUR62043348 Chenopodium quinoa HOM05D005380 ORTHO05D006601 9.4e-83 310.8 252 61.9
ClCG01G008980 Citrullus lanatus HOM05D005380 ORTHO05D006601 4.4e-80 302.0 252 61.1
SEGI_33229 Sequoiadendron giganteum HOM05D005380 ORTHO05D006601 1.4e-73 280.4 248 58.5
Lj1A1141T72 Lonicera japonica HOM05D005380 ORTHO05D006601 5.2e-73 278.5 158 85.4
unitig_747.g21990 Utricularia gibba HOM05D005380 ORTHO05D006601 3.1e-70 269.2 257 59.5
CDE04G2683 Ceratophyllum demersum HOM05D005380 ORTHO05D006601 1.8e-65 253.4 250 56.4
Mapoly0029s0138 Marchantia polymorpha HOM05D005380 ORTHO05D006601 4.1e-54 215.7 251 44.6
Pp3c6_25240 Physcomitrium patens HOM05D005380 ORTHO05D006601 3.0e-52 209.5 252 41.7
BcaNung06594 Brassica carinata HOM05D005380 ORTHO05D006601 3.9e-52 209.1 252 52.4
AagrBONN_evm.TU.Sc2ySwM_362.853 Anthoceros agrestis HOM05D005380 ORTHO05D006601 4.0e-41 172.6 258 38.8
SMO146G0159 Selaginella moellendorffii HOM05D005380 ORTHO05D006601 5.2e-33 145.6 208 35.6
CBR_g10913 Chara braunii HOM05D005380 ORTHO05D006601 1.3e-31 141.0 249 36.5
Cpa.g.sc21.92 Carica papaya HOM05D005380 ORTHO05D006601 1.4e-30 137.5 72 84.7
QL10p043084 Quercus lobata HOM05D005380 ORTHO05D006601 8.6e-28 128.3 77 80.5
Actinidia22434 Actinidia chinensis HOM05D002462 ORTHO05D002893 1.9e-27 127.1 78 83.3
Actinidia22453 Actinidia chinensis HOM05D005380 ORTHO05D006601 1.9e-27 127.1 106 66.0
QL10p044954 Quercus lobata HOM05D004535 ORTHO05D005341 2.0e-24 117.1 69 82.6
QL09p040316 Quercus lobata HOM05D005380 ORTHO05D006601 3.2e-22 109.8 67 79.1
Actinidia22440 Actinidia chinensis HOM05D005380 ORTHO05D006601 3.6e-18 96.3 59 83.1
Actinidia12893 Actinidia chinensis HOM05D005380 ORTHO05D006601 9.0e-17 91.7 49 87.8
Cpa.g.sc21.91 Carica papaya HOM05D005380 ORTHO05D006601 5.8e-16 89.0 53 81.1
QL05p013201 Quercus lobata HOM05D005380 ORTHO05D006601 2.9e-15 86.7 51 78.4
Cre17.g709400 Chlamydomonas reinhardtii HOM05D005380 ORTHO05D006601 4.2e-06 56.2 118 28.0


User provided reference genes

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