Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0038361 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D017712 4.0e-53 211.1 100 100.0
Dinv40935 Davidia involucrata HOM05D000399 ORTHO05D000304 1.7e-40 169.1 94 85.1
Actinidia16900 Actinidia chinensis HOM05D000399 ORTHO05D000304 8.6e-40 166.8 93 84.9
Rhsim08G0003600 Rhododendron simsii HOM05D000399 ORTHO05D000304 9.5e-39 163.3 91 83.5
Hma1.2p1_1509F.1_g287800 Hydrangea macrophylla HOM05D000399 ORTHO05D017712 3.6e-38 161.4 94 79.8
vmacro18656 Vaccinium macrocarpon HOM05D000399 ORTHO05D000304 1.8e-37 159.1 91 81.3
Hma1.2p1_0664F.1_g198960 Hydrangea macrophylla HOM05D000399 ORTHO05D017712 3.8e-35 151.4 109 68.8
Sc06g0000120 Simmondsia chinensis HOM05D000399 ORTHO05D000304 3.5e-33 144.8 93 71.0
Lj7C209T3 Lonicera japonica HOM05D000399 ORTHO05D000304 6.0e-33 144.1 93 75.3
TAR624G0949 Trochodendron aralioides HOM05D000399 ORTHO05D000304 2.3e-32 142.1 94 71.3
AUR62013883 Chenopodium quinoa HOM05D000399 ORTHO05D000304 3.0e-32 141.7 92 70.7
GSVIVG01035494001 Vitis vinifera HOM05D000399 ORTHO05D000304 3.9e-32 141.4 94 71.3
CiPaw.14G040900 Carya illinoinensis HOM05D000399 ORTHO05D000304 6.6e-32 140.6 93 71.0
ECA236G2155 Erigeron canadensis HOM05D000399 ORTHO05D000304 6.6e-32 140.6 93 72.0
Ciclev10007239m.g Citrus clementina HOM05D000399 ORTHO05D000304 8.7e-32 140.2 94 68.1
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 1.1e-31 139.8 93 68.8
Lsat_1_v5_gn_8_70401 Lactuca sativa HOM05D000399 ORTHO05D000304 1.5e-31 139.4 94 69.1
Lsat_1_v5_gn_8_70500 Lactuca sativa HOM05D000399 ORTHO05D000304 3.3e-31 138.3 94 67.0
Nitab4.5_0000508g0010 Nicotiana tabacum HOM05D000399 ORTHO05D000304 3.3e-31 138.3 94 69.1
Nitab4.5_0017941g0010 Nicotiana tabacum HOM05D000399 ORTHO05D017712 3.3e-31 138.3 94 69.1
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 5.6e-31 137.5 92 68.5
QL09p054073 Quercus lobata HOM05D000399 ORTHO05D000304 5.6e-31 137.5 93 69.9
Atru.chr7.1826 Acer truncatum HOM05D000399 ORTHO05D000304 7.3e-31 137.1 94 67.0
PSO135G0437 Papaver somniferum HOM05D000399 ORTHO05D000304 1.3e-30 136.3 94 70.2
PSO724G0698 Papaver somniferum HOM05D000399 ORTHO05D000304 1.3e-30 136.3 94 69.1
Cc08_g06770 Coffea canephora HOM05D000399 ORTHO05D017712 2.1e-30 135.6 91 71.4
TWI63G1283 Tripterygium wilfordii HOM05D000399 ORTHO05D000304 3.6e-30 134.8 94 62.8
Aqoxy7G04095 Aquilegia oxysepala HOM05D000399 ORTHO05D000304 6.2e-30 134.0 93 66.7
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 8.1e-30 133.7 93 64.5
Sabra06G0168700 Salix brachista HOM05D000399 ORTHO05D000304 1.1e-29 133.3 94 66.0
CsaV3_6G031860 Cucumis sativus L. HOM05D000399 ORTHO05D000304 1.4e-29 132.9 94 63.8
Potri.018G047500 Populus trichocarpa HOM05D000399 ORTHO05D000304 3.1e-29 131.7 93 64.5
Solyc08g067210.3 Solanum lycopersicum HOM05D000399 ORTHO05D000304 3.1e-29 131.7 94 64.9
Sopen08g021150 Solanum pennellii HOM05D000399 ORTHO05D000304 3.1e-29 131.7 94 64.9
Thecc.09G065600 Theobroma cacao HOM05D000399 ORTHO05D000304 4.0e-29 131.3 93 66.7
Duzib150G0526 Durio zibethinus HOM05D000399 ORTHO05D000304 5.3e-29 131.0 93 63.4
Peaxi162Scf00922g00316 Petunia axillaris HOM05D000399 ORTHO05D000304 5.3e-29 131.0 94 64.9
Sed0007965 Sechium edule HOM05D000399 ORTHO05D000304 9.0e-29 130.2 94 63.8
ClCG08G009740 Citrullus lanatus HOM05D000399 ORTHO05D000304 1.5e-28 129.4 94 62.8
Manes.03G056500 Manihot esculenta HOM05D000399 ORTHO05D000304 1.5e-28 129.4 94 63.8
Migut.E01470 Erythranthe guttata HOM05D000399 ORTHO05D000304 2.0e-28 129.0 94 67.0
DCAR_001243 Daucus carota HOM05D000399 ORTHO05D000304 5.8e-28 127.5 93 65.6
PGR044G1905 Punica granatum HOM05D000399 ORTHO05D000304 7.6e-28 127.1 94 61.7
Nn8g38601 Nelumbo nucifera HOM05D000399 ORTHO05D000304 1.7e-27 125.9 94 62.8
RcHm_v2.0_Chr6g0284721 Rosa chinensis HOM05D000399 ORTHO05D000304 2.9e-27 125.2 93 64.5
DCAR_004371 Daucus carota HOM05D000399 ORTHO05D000304 1.9e-26 122.5 91 59.3
Gohir.A06G080450 Gossypium hirsutum HOM05D000399 ORTHO05D000304 2.4e-26 122.1 93 60.2
Gohir.D06G080000 Gossypium hirsutum HOM05D000399 ORTHO05D000304 2.4e-26 122.1 93 60.2
Gorai.010G093100 Gossypium raimondii HOM05D000399 ORTHO05D000304 2.4e-26 122.1 93 60.2
arahy.Tifrunner.gnm1.ann1.79WVX3 Arachis hypogaea HOM05D000399 ORTHO05D000304 3.2e-26 121.7 94 62.8
Eucgr.C03173 Eucalyptus grandis HOM05D000399 ORTHO05D000304 3.2e-26 121.7 94 57.4
Glyma.04G057400 Glycine max HOM05D000399 ORTHO05D000304 4.2e-26 121.3 94 61.7
Gohir.D13G195300 Gossypium hirsutum HOM05D000399 ORTHO05D000304 4.2e-26 121.3 92 57.6
arahy.Tifrunner.gnm1.ann1.ZWX69H Arachis hypogaea HOM05D000399 ORTHO05D000304 5.4e-26 120.9 94 61.7
Oeu030209.1 Olea europaea HOM05D000399 ORTHO05D000304 5.4e-26 120.9 94 63.8
Lalb_Chr23g0268041 Lupinus albus HOM05D000399 ORTHO05D000304 7.1e-26 120.6 94 61.7
HanXRQChr05g0136441 Helianthus annuus HOM05D000399 ORTHO05D000304 9.3e-26 120.2 93 60.2
Phvul.009G083800 Phaseolus vulgaris HOM05D000399 ORTHO05D000304 9.3e-26 120.2 94 60.6
Prupe.1G401900 Prunus persica HOM05D000399 ORTHO05D000304 1.2e-25 119.8 94 63.8
FvH4_2g18930 Fragaria vesca HOM05D000399 ORTHO05D000304 1.6e-25 119.4 93 60.2
FAN24G1392 Fragaria x ananassa HOM05D000399 ORTHO05D000304 1.6e-25 119.4 93 60.2
HanXRQChr13g0398971 Helianthus annuus HOM05D000399 ORTHO05D000304 1.6e-25 119.4 89 61.8
Psat5g034960 Pisum sativum HOM05D000399 ORTHO05D000304 1.6e-25 119.4 94 60.6
Prupe.8G202000 Prunus persica HOM05D000399 ORTHO05D000304 1.6e-25 119.4 93 60.2
BcaB02g10763 Brassica carinata HOM05D000399 ORTHO05D000304 2.1e-25 119.0 91 59.3
BcaC01g02230 Brassica carinata HOM05D000399 ORTHO05D000304 2.1e-25 119.0 91 59.3
A06p26820 Brassica napus HOM05D000399 ORTHO05D000304 2.1e-25 119.0 91 59.3
C03p67620 Brassica napus HOM05D000399 ORTHO05D000304 2.1e-25 119.0 91 59.3
BolSC21t60260H Brassica oleracea HOM05D000399 ORTHO05D000304 2.1e-25 119.0 91 59.3
Gorai.013G221400 Gossypium raimondii HOM05D000399 ORTHO05D000304 2.1e-25 119.0 92 57.6
SalBow8G2542 Salvia bowleyana HOM05D000399 ORTHO05D000304 2.1e-25 119.0 94 61.7
Carub.0005s0970 Capsella rubella HOM05D000399 ORTHO05D000304 2.7e-25 118.6 91 58.2
SGA_v2.0_scaffold169G38611 Striga asiatica HOM05D000399 ORTHO05D000304 2.7e-25 118.6 96 61.5
AT3G43920 Arabidopsis thaliana HOM05D000399 ORTHO05D000304 3.5e-25 118.2 91 58.2
Aqoxy2G01226 Aquilegia oxysepala HOM05D000399 ORTHO05D000304 4.6e-25 117.9 93 59.1
ECA236G0176 Erigeron canadensis HOM05D000399 ORTHO05D000304 4.6e-25 117.9 92 62.0
SalBow8G4851 Salvia bowleyana HOM05D000399 ORTHO05D000304 4.6e-25 117.9 94 61.7
AL5G21950 Arabidopsis lyrata HOM05D000399 ORTHO05D000304 7.8e-25 117.1 90 57.8
MBI16_g41119_MAGBIO Magnolia biondii HOM05D000399 ORTHO05D000304 1.0e-24 116.7 94 61.7
Carub.0005s0966 Capsella rubella HOM05D000399 ORTHO05D000304 1.3e-24 116.3 91 57.1
Ca_15808_v3 Cicer arietinum L. HOM05D000399 ORTHO05D000304 1.3e-24 116.3 93 61.3
ECA236G2027 Erigeron canadensis HOM05D000399 ORTHO05D017712 1.3e-24 116.3 94 58.5
Ah.11g040220 Amaranthus hybridus HOM05D000399 ORTHO05D000304 1.7e-24 115.9 93 55.9
SalBow8G0161 Salvia bowleyana HOM05D000399 ORTHO05D000304 1.7e-24 115.9 94 60.6
Sp5g17310 Schrenkiella parvula HOM05D000399 ORTHO05D000304 1.7e-24 115.9 91 57.1
BraA06t25613Z Brassica rapa HOM05D000399 ORTHO05D000304 2.3e-24 115.5 91 58.2
TPR.G3571 Trifolium pratense HOM05D000399 ORTHO05D000304 3.9e-24 114.8 92 58.7
MD15G1047500 Malus domestica HOM05D000399 ORTHO05D000304 5.1e-24 114.4 94 57.4
unitig_37.g12915 Utricularia gibba HOM05D000399 ORTHO05D000304 5.1e-24 114.4 92 62.0
Thhalv10010061m.g Eutrema salsugineum HOM05D000399 ORTHO05D000304 6.6e-24 114.0 91 56.0
VMungo1309G2494 Vigna mungo HOM05D000399 ORTHO05D000304 6.6e-24 114.0 93 57.0
Aa31LG4G13570 Aethionema arabicum HOM05D000399 ORTHO05D000304 1.9e-23 112.5 91 56.0
Medtr3g105390 Medicago truncatula HOM05D000399 ORTHO05D000304 2.5e-23 112.1 93 57.0
Lj1g0021094 Lotus japonicus HOM05D000399 ORTHO05D000304 7.3e-23 110.5 94 54.3
CARHR049880 Cardamine hirsuta HOM05D000399 ORTHO05D000304 9.6e-23 110.2 91 52.7
COL.COLO4_21161 Corchorus olitorius HOM05D000399 ORTHO05D000304 9.6e-23 110.2 95 60.0
THA.LOC104815087 Tarenaya hassleriana HOM05D000399 ORTHO05D000304 2.8e-22 108.6 91 53.8
MD08G1046300 Malus domestica HOM05D000399 ORTHO05D000304 1.1e-21 106.7 94 56.4
FAN15G1291 Fragaria x ananassa HOM05D000399 ORTHO05D000304 2.4e-21 105.5 80 61.2
RcHm_v2.0_Chr6g0312121 Rosa chinensis HOM05D000399 ORTHO05D000304 3.1e-21 105.1 94 58.5
Potri.006G218850 Populus trichocarpa HOM05D000399 ORTHO05D017712 1.5e-20 102.8 68 67.6
Zm00001eb143950 Zea mays HOM05D000399 ORTHO05D000304 2.6e-20 102.1 93 58.1
Os10g0485600 Oryza sativa ssp. japonica HOM05D000399 ORTHO05D000304 3.4e-20 101.7 90 55.6
Haze_03339 Corylus avellana HOM05D000399 ORTHO05D000304 4.5e-20 101.3 94 57.4
FvH4_2g30780 Fragaria vesca HOM05D000399 ORTHO05D000304 2.9e-19 98.6 94 55.3
FAN24G1462 Fragaria x ananassa HOM05D000399 ORTHO05D000304 2.9e-19 98.6 94 55.3
FAN27G0604 Fragaria x ananassa HOM05D000399 ORTHO05D000304 2.9e-19 98.6 94 55.3
Os01g0909200 Oryza sativa ssp. japonica HOM05D000399 ORTHO05D000304 3.8e-19 98.2 96 57.3
HPP92_000547 Vanilla planifolia HOM05D000399 ORTHO05D000304 3.8e-19 98.2 94 50.0
FAN15G0102 Fragaria x ananassa HOM05D000399 ORTHO05D000304 1.4e-18 96.3 94 54.3
CDE02G0393 Ceratophyllum demersum HOM05D000399 ORTHO05D000304 2.4e-18 95.5 94 46.8
FvH4_2g07790 Fragaria vesca HOM05D000399 ORTHO05D000304 3.2e-18 95.1 94 52.1
FAN20G1611 Fragaria x ananassa HOM05D000399 ORTHO05D000304 3.2e-18 95.1 94 54.3
FAN24G2100 Fragaria x ananassa HOM05D000399 ORTHO05D000304 3.2e-18 95.1 94 51.1
FAN15G0842 Fragaria x ananassa HOM05D000399 ORTHO05D000304 7.1e-18 94.0 94 52.1
FAN27G2851 Fragaria x ananassa HOM05D000399 ORTHO05D000304 1.8e-16 89.4 91 52.7
FAN20G0677 Fragaria x ananassa HOM05D000399 ORTHO05D000304 5.1e-16 87.8 94 50.0
ATR0767G233 Amborella trichopoda HOM05D000399 ORTHO05D000304 1.5e-12 76.3 91 45.1
SEGI_32807 Sequoiadendron giganteum HOM05D000399 ORTHO05D017712 6.0e-09 64.3 93 35.5
Cfa010390 Carpinus fangiana HOM05D000399 ORTHO05D000304 7.9e-09 63.9 32 84.4
FAN06G4395 Fragaria x ananassa HOM05D000399 ORTHO05D017712 3.9e-08 61.6 60 50.0
MD10G1163700 Malus domestica HOM05D000399 ORTHO05D000304 3.7e-06 55.1 31 67.7


User provided reference genes

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