Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037969 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.5e-74 282.7 139 100.0
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 2.4e-48 195.7 108 87.0
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 4.0e-43 178.3 108 77.8
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 4.0e-43 178.3 108 78.7
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 4.0e-43 178.3 108 78.7
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 4.0e-43 178.3 108 76.9
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 1.5e-42 176.4 108 77.8
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 3.4e-42 175.3 108 72.2
Lj9A448G32 Lonicera japonica HOM05D001734 ORTHO05D003483 3.4e-42 175.3 106 77.4
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 3.7e-41 171.8 106 78.3
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 4.9e-41 171.4 106 75.5
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 4.9e-41 171.4 108 76.9
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 6.4e-41 171.0 108 74.1
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.1e-40 170.2 108 74.1
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.1e-40 170.2 108 74.1
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 1.1e-40 170.2 108 74.1
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 1.1e-40 170.2 108 75.0
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 2.4e-40 169.1 107 75.7
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 2.4e-40 169.1 107 77.6
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 7.0e-40 167.5 106 75.5
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 7.0e-40 167.5 107 72.9
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 1.2e-39 166.8 108 70.4
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.6e-39 166.4 108 72.2
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 2.0e-39 166.0 107 73.8
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 2.7e-39 165.6 108 71.3
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 1.0e-38 163.7 106 72.6
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 2.3e-38 162.5 108 71.3
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 5.0e-38 161.4 108 70.4
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 6.6e-38 161.0 106 71.7
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 1.1e-37 160.2 108 71.3
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 1.9e-37 159.5 108 70.4
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 7.3e-37 157.5 108 70.4
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 7.3e-37 157.5 108 69.4
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 1.2e-36 156.8 106 68.9
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 2.1e-36 156.0 108 68.5
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 2.8e-36 155.6 108 64.8
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 2.8e-36 155.6 108 69.4
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 6.2e-36 154.5 108 67.6
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 6.2e-36 154.5 108 64.8
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 1.1e-35 153.7 108 69.4
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 1.4e-35 153.3 108 69.4
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 1.4e-35 153.3 108 68.5
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 2.3e-35 152.5 106 68.9
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 3.1e-35 152.1 106 70.8
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 3.1e-35 152.1 108 69.4
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 5.2e-35 151.4 106 68.9
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 8.9e-35 150.6 106 66.0
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 1.2e-34 150.2 108 68.5
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 2.6e-34 149.1 108 66.7
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 4.4e-34 148.3 108 67.6
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 5.8e-34 147.9 108 63.0
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 9.8e-34 147.1 108 68.5
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 9.8e-34 147.1 107 63.6
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 9.8e-34 147.1 108 64.8
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 9.8e-34 147.1 108 63.0
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 1.3e-33 146.7 106 64.2
TPR.G6035 Trifolium pratense HOM05D001734 ORTHO05D003483 1.7e-33 146.4 108 64.8
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 2.9e-33 145.6 108 64.8
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 2.9e-33 145.6 108 62.0
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 2.9e-33 145.6 108 66.7
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 6.4e-33 144.4 108 61.1
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 6.4e-33 144.4 106 67.0
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 8.3e-33 144.1 108 61.1
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 1.1e-32 143.7 108 64.8
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 1.4e-32 143.3 108 63.0
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 2.4e-32 142.5 106 66.0
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 7.1e-32 141.0 106 65.1
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 7.1e-32 141.0 108 63.9
VMungo1309G1151 Vigna mungo HOM05D001734 ORTHO05D003483 9.2e-32 140.6 108 62.0
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 1.7e-30 136.3 108 58.3
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 3.0e-30 135.6 107 59.8
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.9e-30 135.2 108 63.9
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.9e-30 135.2 108 63.9
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 1.5e-29 133.3 108 60.2
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 1.5e-29 133.3 108 60.2
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 1.9e-29 132.9 108 58.3
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 3.3e-29 132.1 108 58.3
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 7.3e-29 131.0 108 58.3
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 1.2e-28 130.2 135 51.1
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 1.2e-28 130.2 135 51.1
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 2.1e-28 129.4 108 58.3
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 2.1e-28 129.4 108 58.3
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 3.6e-28 128.6 108 57.4
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 8.1e-28 127.5 108 57.4
SEGI_29837 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 1.5e-26 123.2 120 48.3
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 5.8e-26 121.3 108 59.3
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 3.7e-25 118.6 107 51.4
ATR0730G231 Amborella trichopoda HOM05D001734 ORTHO05D003483 1.6e-23 113.2 105 49.5
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 3.0e-22 109.0 117 44.4
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 2.5e-21 105.9 108 49.1
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 1.1e-19 100.5 107 47.7
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 5.2e-19 98.2 106 42.5
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 1.2e-18 97.1 65 64.6
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 2.6e-18 95.9 106 52.8
CBR_g290 Chara braunii HOM05D001734 ORTHO05D003483 3.4e-18 95.5 126 38.1
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 5.8e-18 94.7 122 38.5
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 5.8e-10 68.2 42 76.2
SHI17002 Sapria himalayana HOM05D001734 ORTHO05D003483 4.9e-09 65.1 80 48.8
SHI17001 Sapria himalayana HOM05D001734 ORTHO05D003483 2.4e-08 62.8 42 57.1


User provided reference genes

Program Settings