Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037923 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 1.1e-52 209.5 98 100.0
CSS0018701 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 4.3e-44 181.0 100 90.0
CSS0004825 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 1.2e-30 136.3 109 69.7
CSS0024449 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 3.9e-29 131.3 96 75.0
CSS0030659 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 8.8e-21 103.6 73 74.0
Hma1.2p1_0534F.1_g173690 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 3.7e-19 98.2 72 68.1
Hma1.2p1_1265F.1_g271353 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 3.7e-19 98.2 72 68.1
Dinv38803 Davidia involucrata HOM05D004522 ORTHO05D005887 8.2e-19 97.1 71 69.0
Hma1.2p1_0495F.1_g165690 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 8.2e-19 97.1 72 66.7
Dinv37488 Davidia involucrata HOM05D004522 ORTHO05D005887 5.3e-18 94.4 70 68.6
Gohir.D06G110400 Gossypium hirsutum HOM05D004522 ORTHO05D005887 1.2e-17 93.2 73 63.0
Gohir.A06G108300 Gossypium hirsutum HOM05D004522 ORTHO05D005887 1.6e-17 92.8 71 64.8
Gorai.010G125500 Gossypium raimondii HOM05D004522 ORTHO05D005887 1.6e-17 92.8 71 64.8
CiPaw.07G210600 Carya illinoinensis HOM05D004522 ORTHO05D005887 2.0e-17 92.4 71 67.6
Lj8C583T4 Lonicera japonica HOM05D004522 ORTHO05D005887 2.6e-17 92.0 72 65.3
Nn4g23566 Nelumbo nucifera HOM05D004522 ORTHO05D005887 2.6e-17 92.0 72 63.9
Sc10g0004210 Simmondsia chinensis HOM05D004522 ORTHO05D005887 2.6e-17 92.0 90 53.3
QL12p025652 Quercus lobata HOM05D004522 ORTHO05D005887 3.5e-17 91.7 71 66.2
Cfa013296 Carpinus fangiana HOM05D004522 ORTHO05D005887 5.9e-17 90.9 71 69.0
CANSAT25G3238 Cannabis sativa HOM05D004522 ORTHO05D005887 1.0e-16 90.1 72 65.3
Oeu005158.2 Olea europaea HOM05D004522 ORTHO05D005887 1.0e-16 90.1 73 65.8
Ciclev10007345m.g Citrus clementina HOM05D004522 ORTHO05D005887 1.7e-16 89.4 71 64.8
ECA234G1339 Erigeron canadensis HOM05D004522 ORTHO05D005887 1.7e-16 89.4 72 61.1
Haze_21779 Corylus avellana HOM05D004522 ORTHO05D005887 2.2e-16 89.0 71 67.6
Thecc.09G000400 Theobroma cacao HOM05D004522 ORTHO05D005887 3.8e-16 88.2 71 60.6
vmacro18846 Vaccinium macrocarpon HOM05D004522 ORTHO05D005887 5.0e-16 87.8 72 61.1
EL10Ac2g03676 Beta vulgaris HOM05D004522 ORTHO05D005887 6.5e-16 87.4 72 58.3
AUR62044451 Chenopodium quinoa HOM05D004522 ORTHO05D005887 8.5e-16 87.0 85 54.1
Sed0013871 Sechium edule HOM05D004522 ORTHO05D005887 8.5e-16 87.0 72 62.5
AUR62020658 Chenopodium quinoa HOM05D004522 ORTHO05D005887 1.1e-15 86.7 72 59.7
Eucgr.C02139 Eucalyptus grandis HOM05D004522 ORTHO05D005887 1.5e-15 86.3 74 58.1
Potri.006G279700 Populus trichocarpa HOM05D004522 ORTHO05D005887 1.5e-15 86.3 71 62.0
AUR62028071 Chenopodium quinoa HOM05D004522 ORTHO05D005887 2.5e-15 85.5 71 59.2
AUR62043895 Chenopodium quinoa HOM05D004522 ORTHO05D005887 2.5e-15 85.5 71 59.2
Ah.14g088390 Amaranthus hybridus HOM05D004522 ORTHO05D005887 3.2e-15 85.1 72 58.3
Migut.C00355 Erythranthe guttata HOM05D004522 ORTHO05D005887 3.2e-15 85.1 73 60.3
ClCG05G026380 Citrullus lanatus HOM05D004522 ORTHO05D005887 4.2e-15 84.7 71 62.0
Rhsim08G0228200 Rhododendron simsii HOM05D004522 ORTHO05D005887 4.2e-15 84.7 72 61.1
Sabra06G0216700 Salix brachista HOM05D004522 ORTHO05D005887 1.2e-14 83.2 73 60.3
GSVIVG01035576001 Vitis vinifera HOM05D004522 ORTHO05D005887 1.2e-14 83.2 71 64.8
Phvul.002G181900 Phaseolus vulgaris HOM05D004522 ORTHO05D005887 2.1e-14 82.4 73 61.6
Cpa.g.sc246.4 Carica papaya HOM05D004522 ORTHO05D005887 2.7e-14 82.0 71 60.6
CAN.G809.41 Capsicum annuum HOM05D004522 ORTHO05D005887 3.6e-14 81.6 73 54.8
HanXRQChr16g0521121 Helianthus annuus HOM05D004522 ORTHO05D005887 3.6e-14 81.6 73 58.9
Peaxi162Scf00036g01311 Petunia axillaris HOM05D004522 ORTHO05D005887 3.6e-14 81.6 73 56.2
Nitab4.5_0000844g0320 Nicotiana tabacum HOM05D004522 ORTHO05D005887 4.7e-14 81.3 73 54.8
Nitab4.5_0011308g0040 Nicotiana tabacum HOM05D004522 ORTHO05D005887 4.7e-14 81.3 73 54.8
arahy.Tifrunner.gnm1.ann1.696W46 Arachis hypogaea HOM05D004522 ORTHO05D005887 8.0e-14 80.5 72 58.3
Actinidia21721 Actinidia chinensis HOM05D004522 ORTHO05D005887 1.0e-13 80.1 71 57.7
Manes.03G000450 Manihot esculenta HOM05D004522 ORTHO05D005887 1.0e-13 80.1 72 59.7
RhsimUnG0118700 Rhododendron simsii HOM05D004522 ORTHO05D005887 1.0e-13 80.1 72 59.7
VMungo0251G2701 Vigna mungo HOM05D004522 ORTHO05D005887 1.0e-13 80.1 73 58.9
Psat6g033360 Pisum sativum HOM05D004522 ORTHO05D005887 1.4e-13 79.7 70 58.6
Solyc02g081910.2 Solanum lycopersicum HOM05D004522 ORTHO05D005887 1.4e-13 79.7 73 53.4
Sopen02g026540 Solanum pennellii HOM05D004522 ORTHO05D005887 1.4e-13 79.7 73 53.4
arahy.Tifrunner.gnm1.ann1.IIX4FM Arachis hypogaea HOM05D004522 ORTHO05D005887 2.3e-13 79.0 72 56.9
Prupe.1G457500 Prunus persica HOM05D004522 ORTHO05D005887 2.3e-13 79.0 71 57.7
TAR629G0385 Trochodendron aralioides HOM05D004522 ORTHO05D005887 2.3e-13 79.0 80 47.5
Lalb_Chr22g0361201 Lupinus albus HOM05D004522 ORTHO05D005887 4.0e-13 78.2 71 53.5
unitig_60.g25825 Utricularia gibba HOM05D004522 ORTHO05D005887 6.8e-13 77.4 72 55.6
CANSAT54G0998 Cannabis sativa HOM05D004522 ORTHO05D005887 1.5e-12 76.3 72 58.3
Lj5g0011494 Lotus japonicus HOM05D004522 ORTHO05D005887 1.5e-12 76.3 72 55.6
SGA_v2.0_scaffold62G21366 Striga asiatica HOM05D004522 ORTHO05D005887 1.5e-12 76.3 72 55.6
THA.LOC104819919 Tarenaya hassleriana HOM05D004522 ORTHO05D005887 1.5e-12 76.3 71 53.5
Atru.chr7.2700 Acer truncatum HOM05D004522 ORTHO05D005887 2.0e-12 75.9 71 53.5
Aa31LG2G19110 Aethionema arabicum HOM05D004522 ORTHO05D005887 2.0e-12 75.9 71 56.3
Ca_01520_v3 Cicer arietinum L. HOM05D004522 ORTHO05D005887 2.0e-12 75.9 70 57.1
Glyma.14G137100 Glycine max HOM05D004522 ORTHO05D005887 2.0e-12 75.9 73 54.8
PSO063G2748 Papaver somniferum HOM05D004522 ORTHO05D005887 2.0e-12 75.9 72 58.3
PSO782G1701 Papaver somniferum HOM05D004522 ORTHO05D005887 2.0e-12 75.9 72 58.3
Glyma.17G196400 Glycine max HOM05D004522 ORTHO05D005887 2.6e-12 75.5 71 56.3
Sed0008341 Sechium edule HOM05D004522 ORTHO05D005887 2.6e-12 75.5 70 54.3
Hund03258 Selenicereus undatus HOM05D004522 ORTHO05D005887 2.6e-12 75.5 70 48.6
Aa31LG2G19120 Aethionema arabicum HOM05D004522 ORTHO05D005887 3.4e-12 75.1 72 56.9
Thhalv10024242m.g Eutrema salsugineum HOM05D004522 ORTHO05D005887 5.7e-12 74.3 71 50.7
FvH4_2g36580 Fragaria vesca HOM05D004522 ORTHO05D005887 7.5e-12 73.9 71 53.5
RcHm_v2.0_Chr6g0305241 Rosa chinensis HOM05D004522 ORTHO05D005887 9.8e-12 73.6 71 52.1
CARHR239110 Cardamine hirsuta HOM05D004522 ORTHO05D005887 1.3e-11 73.2 71 49.3
TWI63G0055 Tripterygium wilfordii HOM05D004522 ORTHO05D005887 1.7e-11 72.8 75 56.0
MELO3C003609.2 Cucumis melo HOM05D004522 ORTHO05D005887 2.2e-11 72.4 72 52.8
Carub.0007s0933 Capsella rubella HOM05D004522 ORTHO05D005887 2.8e-11 72.0 72 54.2
AT4G31210 Arabidopsis thaliana HOM05D004522 ORTHO05D005887 3.7e-11 71.6 71 49.3
Cc09_g04950 Coffea canephora HOM05D004522 ORTHO05D005887 3.7e-11 71.6 74 52.7
FAN20G0828 Fragaria x ananassa HOM05D004522 ORTHO05D005887 3.7e-11 71.6 72 54.2
Sp7g29090 Schrenkiella parvula HOM05D004522 ORTHO05D005887 3.7e-11 71.6 71 50.7
AL7G20870 Arabidopsis lyrata HOM05D004522 ORTHO05D005887 1.1e-10 70.1 71 47.9
BcaNung01535 Brassica carinata HOM05D004522 ORTHO05D005887 1.1e-10 70.1 71 49.3
A03p60590 Brassica napus HOM05D004522 ORTHO05D005887 1.1e-10 70.1 71 49.3
C07p58490 Brassica napus HOM05D004522 ORTHO05D005887 1.1e-10 70.1 71 49.3
BolC7t46304H Brassica oleracea HOM05D004522 ORTHO05D005887 1.1e-10 70.1 71 49.3
BraA03t15100Z Brassica rapa HOM05D004522 ORTHO05D005887 1.1e-10 70.1 71 49.3
DCAR_006332 Daucus carota HOM05D004522 ORTHO05D005887 1.1e-10 70.1 75 56.0
vmacro20064 Vaccinium macrocarpon HOM05D004522 ORTHO05D005887 1.4e-10 69.7 72 56.9
FAN27G1482 Fragaria x ananassa HOM05D004522 ORTHO05D005887 1.8e-10 69.3 71 49.3
MBI16_g42310_MAGBIO Magnolia biondii HOM05D004522 ORTHO05D005887 1.8e-10 69.3 92 44.6
BcaC09g51903 Brassica carinata HOM05D004522 ORTHO05D005887 2.4e-10 68.9 72 51.4
A01p07030 Brassica napus HOM05D004522 ORTHO05D005887 2.4e-10 68.9 72 51.4
C01p07770 Brassica napus HOM05D004522 ORTHO05D005887 2.4e-10 68.9 72 51.4
BraA01t00655Z Brassica rapa HOM05D004522 ORTHO05D005887 2.4e-10 68.9 72 51.4
BolC1t00764H Brassica oleracea HOM05D004522 ORTHO05D005887 3.1e-10 68.6 72 51.4
MD08G1125900 Malus domestica HOM05D004522 ORTHO05D005887 3.1e-10 68.6 72 52.8
Psat6g033400 Pisum sativum HOM05D004522 ORTHO05D005887 3.1e-10 68.6 70 51.4
CsaV3_3G047220 Cucumis sativus L. HOM05D004522 ORTHO05D005887 5.4e-10 67.8 73 50.7
Migut.E00600 Erythranthe guttata HOM05D004522 ORTHO05D005887 9.1e-10 67.0 72 47.2
Medtr0229s0020 Medicago truncatula HOM05D004522 ORTHO05D005887 1.2e-09 66.6 72 55.6
Medtr0245s0010 Medicago truncatula HOM05D004522 ORTHO05D005887 1.2e-09 66.6 72 55.6
Medtr1g009315 Medicago truncatula HOM05D004522 ORTHO05D005887 1.2e-09 66.6 72 55.6
SalBow1G6309 Salvia bowleyana HOM05D004522 ORTHO05D005887 1.2e-09 66.6 74 54.1
TPR.G39482 Trifolium pratense HOM05D004522 ORTHO05D005887 5.9e-09 64.3 75 50.7
MD15G1105700 Malus domestica HOM05D004522 ORTHO05D005887 1.0e-08 63.5 75 49.3
TPR.G12110 Trifolium pratense HOM05D004522 ORTHO05D005887 1.0e-08 63.5 72 52.8
ATR0691G178 Amborella trichopoda HOM05D004522 ORTHO05D005887 2.9e-08 62.0 74 44.6
COL.COLO4_18648 Corchorus olitorius HOM05D004522 ORTHO05D005887 3.8e-08 61.6 71 50.7
Aqoxy3G03771 Aquilegia oxysepala HOM05D004522 ORTHO05D005887 5.0e-08 61.2 74 45.9
PGSC0003DMG400012781 Solanum tuberosum HOM05D004522 ORTHO05D005887 1.9e-07 59.3 62 46.8
Actinidia32105 Actinidia chinensis HOM05D004522 ORTHO05D005887 3.2e-07 58.5 67 49.3
Medtr1g009570 Medicago truncatula HOM05D004522 ORTHO05D005887 3.2e-07 58.5 66 50.0
AUR62038716 Chenopodium quinoa HOM05D004522 ORTHO05D005887 1.2e-06 56.6 29 86.2
SEGI_38297 Sequoiadendron giganteum HOM05D004522 ORTHO05D005887 3.6e-06 55.1 80 37.5


User provided reference genes

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