Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.2e-56 221.5 108 100.0
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.7e-52 208.0 103 97.1
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.3e-49 199.5 100 94.0
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.1e-47 192.2 100 92.0
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.3e-45 184.9 93 93.5
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 1.7e-41 172.6 100 79.0
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 6.5e-41 170.6 100 78.0
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 1.9e-40 169.1 101 79.2
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.6e-39 166.0 108 79.6
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 3.5e-39 164.9 100 76.0
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 6.0e-39 164.1 100 78.0
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 6.7e-38 160.6 100 75.0
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 6.7e-38 160.6 100 75.0
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 8.7e-38 160.2 100 77.0
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 4.8e-36 154.5 104 70.2
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 5.3e-35 151.0 100 70.0
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 9.0e-35 150.2 100 72.0
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 1.2e-34 149.8 100 65.0
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 2.6e-34 148.7 101 69.3
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 2.2e-33 145.6 103 65.0
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 2.9e-33 145.2 100 66.0
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 3.8e-33 144.8 100 65.0
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 3.8e-33 144.8 100 68.0
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 5.0e-33 144.4 101 70.3
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 6.5e-33 144.1 104 68.3
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 6.5e-33 144.1 99 64.6
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 6.5e-33 144.1 100 64.0
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.4e-32 142.9 103 67.0
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 1.4e-32 142.9 102 67.6
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 1.4e-32 142.9 100 64.0
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 3.2e-32 141.7 100 64.0
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 3.2e-32 141.7 100 67.0
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 3.2e-32 141.7 100 67.0
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 3.2e-32 141.7 100 66.0
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 3.2e-32 141.7 100 64.0
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 4.2e-32 141.4 100 67.0
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 4.2e-32 141.4 100 67.0
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 4.2e-32 141.4 104 63.5
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 5.5e-32 141.0 104 64.4
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 7.2e-32 140.6 101 64.4
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 9.3e-32 140.2 93 74.2
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 9.3e-32 140.2 100 65.0
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 9.3e-32 140.2 100 67.0
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 1.2e-31 139.8 100 62.0
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 1.6e-31 139.4 100 64.0
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 1.6e-31 139.4 100 68.0
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 2.1e-31 139.0 100 66.0
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 2.7e-31 138.7 101 63.4
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 4.6e-31 137.9 100 64.0
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 4.6e-31 137.9 100 65.0
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 6.1e-31 137.5 100 64.0
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.0e-30 136.7 100 64.0
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 1.4e-30 136.3 104 62.5
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 3.0e-30 135.2 100 65.0
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 3.0e-30 135.2 100 65.0
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 3.9e-30 134.8 100 64.0
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 5.1e-30 134.4 101 63.4
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 1.1e-29 133.3 100 63.0
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 1.1e-29 133.3 94 68.1
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 1.5e-29 132.9 100 60.0
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 1.9e-29 132.5 100 64.0
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 1.9e-29 132.5 101 64.4
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 3.3e-29 131.7 100 65.0
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 5.7e-29 131.0 100 63.0
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 7.4e-29 130.6 100 62.0
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 9.7e-29 130.2 101 64.4
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 1.7e-28 129.4 100 64.0
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 2.2e-28 129.0 100 60.0
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 1.1e-27 126.7 100 60.0
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 1.4e-27 126.3 100 63.0
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 3.1e-27 125.2 100 62.0
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 5.3e-27 124.4 100 61.0
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 5.3e-27 124.4 100 61.0
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 6.9e-27 124.0 100 61.0
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 6.9e-27 124.0 100 61.0
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 6.9e-27 124.0 104 52.9
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 1.5e-26 122.9 100 60.0
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 4.5e-26 121.3 100 60.0
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 4.5e-26 121.3 104 56.7
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 4.5e-26 121.3 104 56.7
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 5.9e-26 120.9 100 60.0
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 5.9e-26 120.9 100 60.0
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 5.9e-26 120.9 100 62.0
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 5.9e-26 120.9 100 58.0
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 7.7e-26 120.6 100 59.0
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 1.0e-25 120.2 98 63.3
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 1.3e-25 119.8 100 59.0
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 1.3e-25 119.8 100 59.0
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 1.7e-25 119.4 104 56.7
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 1.7e-25 119.4 100 58.0
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.7e-25 119.4 100 58.0
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 2.2e-25 119.0 100 61.0
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 3.8e-25 118.2 100 61.0
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 3.8e-25 118.2 100 56.0
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.0e-25 117.9 100 57.0
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 8.5e-25 117.1 100 56.0
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 1.9e-24 115.9 100 58.0
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.5e-24 115.5 100 56.0
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 3.2e-24 115.2 100 61.0
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 1.2e-23 113.2 100 53.0
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 6.7e-22 107.5 104 52.9
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 2.6e-21 105.5 88 54.5
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 5.7e-21 104.4 100 55.0
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 3.7e-20 101.7 73 68.5
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.8e-19 99.4 93 54.8
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 8.5e-17 90.5 87 49.4
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 3.2e-16 88.6 89 52.8
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 2.0e-13 79.3 100 41.0
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 4.4e-13 78.2 100 42.0
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 1.3e-12 76.6 79 54.4
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 1.7e-12 76.3 102 37.3
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 8.2e-12 73.9 47 70.2
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.2e-10 70.1 47 66.0
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 1.9e-08 62.8 99 37.4


User provided reference genes

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