Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.2e-59 231.1 113 100.0
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.5e-52 207.2 103 97.1
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.9e-51 205.7 100 97.0
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 9.7e-48 193.4 100 93.0
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.2e-45 186.4 93 94.6
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 8.0e-42 173.7 100 80.0
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 3.0e-41 171.8 100 79.0
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 8.8e-41 170.2 101 80.2
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 1.7e-39 166.0 104 76.9
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 3.7e-39 164.9 100 76.0
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 2.4e-38 162.2 103 80.6
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.4e-38 162.2 102 74.5
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.4e-38 162.2 102 74.5
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 3.1e-38 161.8 100 78.0
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 1.0e-36 156.8 106 72.6
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 3.2e-35 151.8 104 68.3
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 4.2e-35 151.4 100 73.0
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 1.6e-34 149.4 102 69.6
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 3.6e-34 148.3 104 62.5
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 8.0e-34 147.1 106 67.9
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 1.0e-33 146.7 104 65.4
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 2.3e-33 145.6 103 64.1
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 4.0e-33 144.8 104 66.3
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 5.2e-33 144.4 104 62.5
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 6.8e-33 144.1 104 67.3
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 6.8e-33 144.1 102 69.6
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 8.8e-33 143.7 93 76.3
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 8.8e-33 143.7 104 66.3
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 8.8e-33 143.7 104 66.3
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 1.2e-32 143.3 105 66.7
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 1.2e-32 143.3 104 65.4
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 1.5e-32 142.9 102 62.7
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.5e-32 142.9 104 66.3
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.5e-32 142.9 104 66.3
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 2.0e-32 142.5 105 66.7
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 2.0e-32 142.5 104 64.4
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 2.0e-32 142.5 106 65.1
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 3.4e-32 141.7 104 64.4
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 4.4e-32 141.4 99 64.6
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 4.4e-32 141.4 104 61.5
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 5.7e-32 141.0 104 65.4
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 5.7e-32 141.0 104 67.3
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 5.7e-32 141.0 104 65.4
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 9.8e-32 140.2 104 61.5
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 1.3e-31 139.8 102 61.8
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 1.7e-31 139.4 104 64.4
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 2.2e-31 139.0 104 63.5
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 3.7e-31 138.3 104 59.6
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 3.7e-31 138.3 105 64.8
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 4.9e-31 137.9 104 61.5
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 6.3e-31 137.5 106 64.2
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.1e-30 136.7 104 61.5
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 1.1e-30 136.7 100 67.0
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 1.1e-30 136.7 104 63.5
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 1.1e-30 136.7 104 64.4
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 1.4e-30 136.3 104 63.5
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.4e-30 136.3 100 64.0
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 1.8e-30 136.0 100 65.0
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 2.4e-30 135.6 100 62.0
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 2.4e-30 135.6 102 62.7
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 2.4e-30 135.6 104 63.5
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 5.4e-30 134.4 104 63.5
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 5.4e-30 134.4 105 60.0
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 9.2e-30 133.7 98 66.3
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 2.0e-29 132.5 104 63.5
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 5.9e-29 131.0 104 63.5
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 1.0e-28 130.2 104 58.7
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 1.0e-28 130.2 104 63.5
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 1.3e-28 129.8 104 61.5
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 1.3e-28 129.8 104 61.5
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 1.7e-28 129.4 104 61.5
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 3.8e-28 128.3 104 60.6
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 6.6e-28 127.5 100 60.0
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 1.1e-27 126.7 104 60.6
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 1.9e-27 125.9 102 58.8
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 1.9e-27 125.9 102 58.8
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 2.5e-27 125.6 104 61.5
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 3.3e-27 125.2 104 58.7
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 5.6e-27 124.4 104 59.6
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 7.3e-27 124.0 102 58.8
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 9.5e-27 123.6 102 52.0
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 1.2e-26 123.2 100 58.0
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 2.8e-26 122.1 104 58.7
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 3.6e-26 121.7 102 57.8
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 8.0e-26 120.6 100 60.0
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 8.0e-26 120.6 100 60.0
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 1.0e-25 120.2 105 58.1
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.0e-25 120.2 102 56.9
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.0e-25 120.2 102 56.9
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 1.4e-25 119.8 100 59.0
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 1.4e-25 119.8 104 56.7
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 1.8e-25 119.4 100 59.0
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 2.3e-25 119.0 106 59.4
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 3.0e-25 118.6 104 53.8
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.2e-25 117.9 102 54.9
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 6.8e-25 117.5 100 61.0
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 1.2e-24 116.7 93 63.4
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.5e-24 116.3 102 54.9
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 2.0e-24 115.9 100 58.0
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 5.7e-24 114.4 104 58.7
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 1.8e-22 109.4 106 54.7
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 2.4e-22 109.0 92 54.3
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 4.1e-22 108.2 104 54.8
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 1.3e-20 103.2 73 69.9
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 6.6e-20 100.9 93 55.9
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 5.2e-17 91.3 93 47.3
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 4.4e-16 88.2 89 52.8
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 3.5e-13 78.6 104 40.4
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 6.0e-13 77.8 104 41.3
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 7.8e-13 77.4 49 69.4
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 7.8e-13 77.4 102 37.3
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 3.9e-12 75.1 79 53.2
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.1e-11 73.6 47 68.1
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 3.1e-09 65.5 105 37.1


User provided reference genes

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