Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 6.9e-156 553.9 276 100.0
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 6.3e-133 477.6 282 86.5
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 1.2e-70 270.8 284 55.6
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 7.9e-51 204.9 296 45.9
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 1.4e-42 177.6 259 42.9
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 5.0e-37 159.1 134 59.7
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 3.1e-31 139.8 80 87.5
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 3.5e-30 136.3 87 74.7
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 7.2e-28 128.6 80 76.2
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 7.2e-28 128.6 80 78.8
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 9.4e-28 128.3 80 78.8
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 1.2e-27 127.9 80 77.5
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 1.6e-27 127.5 80 78.8
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 1.6e-27 127.5 83 75.9
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 1.6e-27 127.5 83 75.9
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 2.1e-27 127.1 80 75.0
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 2.1e-27 127.1 80 80.0
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 3.6e-27 126.3 80 77.5
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 3.6e-27 126.3 80 77.5
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 3.6e-27 126.3 80 76.2
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 6.1e-27 125.6 80 76.2
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 8.0e-27 125.2 80 76.2
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 8.0e-27 125.2 80 75.0
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 1.0e-26 124.8 80 73.8
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 1.0e-26 124.8 80 76.2
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 1.4e-26 124.4 80 75.0
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 1.4e-26 124.4 80 75.0
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 1.4e-26 124.4 80 75.0
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 1.4e-26 124.4 80 75.0
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 1.4e-26 124.4 80 77.5
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 1.4e-26 124.4 80 73.8
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 1.4e-26 124.4 80 78.8
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 1.8e-26 124.0 80 76.2
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 1.8e-26 124.0 80 75.0
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 1.8e-26 124.0 80 75.0
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 1.8e-26 124.0 80 75.0
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 2.3e-26 123.6 80 77.5
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 2.3e-26 123.6 80 77.5
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 2.3e-26 123.6 80 76.2
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 2.3e-26 123.6 80 76.2
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 2.3e-26 123.6 80 75.0
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 3.0e-26 123.2 80 77.5
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 3.9e-26 122.9 80 76.2
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 3.9e-26 122.9 80 77.5
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 3.9e-26 122.9 80 75.0
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 3.9e-26 122.9 80 75.0
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 3.9e-26 122.9 80 73.8
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 5.2e-26 122.5 80 75.0
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 5.2e-26 122.5 80 75.0
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 5.2e-26 122.5 80 75.0
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 5.2e-26 122.5 80 75.0
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 5.2e-26 122.5 80 76.2
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 6.7e-26 122.1 80 75.0
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 6.7e-26 122.1 80 73.8
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 6.7e-26 122.1 80 76.2
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 6.7e-26 122.1 94 63.8
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 8.8e-26 121.7 80 73.8
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 8.8e-26 121.7 112 58.0
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 1.1e-25 121.3 112 58.0
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 1.1e-25 121.3 112 58.0
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 1.1e-25 121.3 80 71.2
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 1.1e-25 121.3 80 75.0
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 1.1e-25 121.3 80 75.0
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 1.1e-25 121.3 80 75.0
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 1.1e-25 121.3 80 72.5
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 1.5e-25 120.9 80 73.8
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 1.5e-25 120.9 80 75.0
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 1.5e-25 120.9 80 76.2
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.5e-25 120.9 80 71.2
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 1.5e-25 120.9 80 73.8
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 1.5e-25 120.9 80 72.5
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 1.5e-25 120.9 80 75.0
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 2.0e-25 120.6 80 73.8
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 2.0e-25 120.6 80 71.2
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 2.6e-25 120.2 80 75.0
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 3.3e-25 119.8 80 73.8
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 3.3e-25 119.8 80 72.5
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.3e-25 119.8 80 73.8
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 3.3e-25 119.8 80 73.8
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 3.3e-25 119.8 80 72.5
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 4.4e-25 119.4 80 73.8
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 4.4e-25 119.4 80 72.5
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 4.4e-25 119.4 80 72.5
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 4.4e-25 119.4 80 72.5
AUR62014934 Chenopodium quinoa HOM05D008055 ORTHO05D009927 5.7e-25 119.0 121 57.9
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 7.4e-25 118.6 80 70.0
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 7.4e-25 118.6 80 70.0
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 7.4e-25 118.6 80 70.0
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 7.4e-25 118.6 80 71.2
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 9.7e-25 118.2 81 71.6
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 1.7e-24 117.5 80 71.2
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 1.7e-24 117.5 80 70.0
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 1.7e-24 117.5 80 71.2
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 2.8e-24 116.7 80 70.0
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 2.8e-24 116.7 83 67.5
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 3.7e-24 116.3 80 71.2
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 3.7e-24 116.3 80 71.2
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 6.3e-24 115.5 80 70.0
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 6.3e-24 115.5 80 68.8
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 1.4e-23 114.4 80 68.8
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.4e-23 114.4 58 87.9
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 2.4e-23 113.6 80 70.0
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 1.2e-22 111.3 59 89.8
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 5.9e-22 109.0 83 60.2
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 6.5e-21 105.5 83 55.4
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 1.5e-20 104.4 80 65.0
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 2.3e-18 97.1 80 57.5
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 1.2e-17 94.7 80 58.8
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 5.7e-17 92.4 80 58.8
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 3.8e-13 79.7 170 31.8
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 1.1e-12 78.2 80 48.8
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 1.2e-11 74.7 176 31.2


User provided reference genes

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