Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 5.8e-75 284.3 156 100.0
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.5e-67 259.6 166 83.1
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.5e-59 231.5 166 74.7
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 8.4e-50 200.7 191 62.8
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.3e-45 186.8 136 74.3
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 1.8e-44 183.0 186 58.6
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.8e-37 158.3 119 81.5
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.8e-37 158.3 119 81.5
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 1.4e-33 146.7 223 44.4
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 2.1e-32 142.9 187 50.3
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 1.4e-31 140.2 228 43.0
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 2.5e-30 136.0 189 48.7
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 8.5e-26 120.9 173 46.8
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 4.2e-25 118.6 186 43.5
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 2.7e-24 115.9 183 42.1
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 6.1e-24 114.8 183 42.1
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 1.1e-22 110.5 193 43.0
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 1.5e-22 110.2 165 49.7
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 4.4e-22 108.6 188 41.5
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 2.2e-21 106.3 194 39.7
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 2.2e-21 106.3 194 39.7
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 2.8e-21 105.9 189 38.6
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.7e-21 105.5 189 38.6
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 8.2e-21 104.4 189 41.3
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 8.2e-21 104.4 194 39.2
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.4e-20 103.6 189 38.1
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.4e-20 103.6 189 38.1
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 3.1e-20 102.4 195 40.5
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 4.5e-19 98.6 189 39.2
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 4.5e-19 98.6 189 37.6
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 1.0e-18 97.4 191 39.8
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 1.3e-18 97.1 178 37.1
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 1.9e-17 93.2 189 37.0
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 4.2e-17 92.0 184 39.1
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 4.2e-17 92.0 186 36.0
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 7.2e-17 91.3 189 37.0
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 9.4e-17 90.9 191 39.3
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 1.2e-16 90.5 191 38.2
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 2.7e-16 89.4 194 37.1
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.0e-15 87.4 187 35.3
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 1.4e-15 87.0 189 37.6
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 5.2e-15 85.1 188 38.3
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 6.7e-15 84.7 191 36.1
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 6.7e-15 84.7 188 34.6
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 8.8e-15 84.3 188 34.6
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 8.8e-15 84.3 188 36.2
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 5.7e-14 81.6 153 36.6
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 5.7e-14 81.6 187 37.4
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 1.3e-13 80.5 189 33.9
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 2.2e-13 79.7 190 36.3
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 1.4e-12 77.0 188 31.4
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 1.4e-12 77.0 188 35.6
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 1.8e-12 76.6 179 34.6
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 2.4e-12 76.3 193 35.8
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 3.1e-12 75.9 190 33.7
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 3.1e-12 75.9 188 32.4
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 1.2e-11 73.9 191 35.1
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 1.2e-11 73.9 189 35.4
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 1.6e-11 73.6 191 34.0
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.6e-11 73.6 180 36.1
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 2.0e-11 73.2 188 35.6
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 2.0e-11 73.2 162 36.4
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 3.5e-11 72.4 190 33.2
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 4.5e-11 72.0 205 32.7
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 5.9e-11 71.6 186 31.2
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 1.0e-10 70.9 181 34.8
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 1.3e-10 70.5 189 34.4
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.7e-10 70.1 183 36.1
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 2.9e-10 69.3 191 35.1
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 6.5e-10 68.2 189 34.4
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 6.5e-10 68.2 189 34.4
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 6.5e-10 68.2 81 50.6
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 8.5e-10 67.8 188 33.0
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 2.5e-09 66.2 187 32.1
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 7.2e-09 64.7 181 35.4
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 7.2e-09 64.7 181 35.4
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.6e-08 63.5 181 34.8
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 2.7e-08 62.8 92 45.7
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 3.6e-08 62.4 78 52.6
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 4.7e-08 62.0 182 34.1
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 6.1e-08 61.6 193 33.2
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 8.0e-08 61.2 167 32.9
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 8.0e-08 61.2 193 32.1
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 1.8e-07 60.1 182 33.5
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 4.0e-07 58.9 183 33.3
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 4.0e-07 58.9 183 33.3
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 5.2e-07 58.5 190 31.6
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 8.8e-07 57.8 177 32.2
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 2.6e-06 56.2 186 33.9
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 3.3e-06 55.8 183 32.2
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 7.5e-06 54.7 184 32.1


User provided reference genes

Program Settings