Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 3.6e-211 738.8 661 100.0
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 1.2e-126 458.0 683 76.9
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 3.0e-112 410.2 681 74.2
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 3.3e-111 406.8 675 74.5
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 4.7e-110 402.9 729 50.2
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 4.4e-108 396.4 680 72.6
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 7.6e-108 395.6 664 75.3
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 9.9e-108 395.2 679 73.6
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 1.3e-107 394.8 679 73.2
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 3.8e-107 393.3 663 74.1
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 1.2e-105 388.3 692 71.4
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 1.2e-105 388.3 685 71.7
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 4.6e-105 386.3 675 72.4
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 7.8e-105 385.6 723 56.4
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 5.1e-104 382.9 663 72.5
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 5.6e-103 379.4 556 83.8
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 2.1e-102 377.5 671 74.5
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 6.2e-102 375.9 673 74.1
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 2.4e-101 374.0 671 73.3
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 8.9e-101 372.1 667 73.5
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 8.9e-101 372.1 604 78.3
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 3.4e-100 370.2 674 72.6
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 1.3e-99 368.2 664 71.7
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 1.9e-98 364.4 641 73.8
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 4.2e-98 363.2 658 73.1
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.2e-97 361.7 667 71.4
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 7.8e-97 359.0 669 71.2
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 7.8e-97 359.0 651 73.7
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.0e-96 358.6 659 73.1
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 3.9e-96 356.7 662 72.5
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.9e-96 356.7 666 71.3
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 8.7e-96 355.5 688 70.2
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 8.7e-96 355.5 650 73.7
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 1.9e-95 354.4 659 73.1
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 5.6e-95 352.8 662 72.2
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 5.6e-95 352.8 667 71.5
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 4.8e-94 349.7 668 71.3
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 8.1e-94 349.0 664 71.1
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 4.0e-93 346.7 665 71.0
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 5.3e-93 346.3 578 78.4
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 4.9e-91 339.7 651 71.6
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 8.4e-91 339.0 576 76.7
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 1.1e-90 338.6 587 67.1
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 1.4e-90 338.2 665 71.4
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 3.2e-90 337.0 658 71.3
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 4.2e-90 336.7 670 72.1
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 9.3e-90 335.5 672 70.7
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 3.5e-89 333.6 656 69.8
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 4.6e-89 333.2 651 70.0
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 7.9e-89 332.4 568 75.5
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 3.0e-88 330.5 648 71.0
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 3.0e-88 330.5 633 73.0
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 3.9e-88 330.1 654 69.7
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 5.1e-88 329.7 651 71.1
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 5.1e-88 329.7 643 69.4
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 7.4e-87 325.9 674 68.8
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 1.6e-86 324.7 623 72.4
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 2.1e-86 324.3 623 72.2
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 2.8e-86 323.9 636 71.7
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 3.6e-86 323.6 633 71.7
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 4.8e-86 323.2 659 69.3
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 1.4e-85 321.6 623 71.4
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 1.4e-85 321.6 623 71.4
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 2.4e-85 320.9 620 73.9
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 3.1e-85 320.5 623 72.1
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 4.0e-85 320.1 562 76.9
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 5.3e-85 319.7 633 71.6
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 1.2e-84 318.5 637 71.1
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 1.5e-84 318.2 633 70.5
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 2.0e-84 317.8 632 71.0
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 3.4e-84 317.0 703 66.9
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 5.8e-84 316.2 710 66.2
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 2.2e-83 314.3 528 82.2
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 2.9e-83 313.9 638 70.2
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 6.4e-83 312.8 534 78.5
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 3.2e-82 310.5 639 70.1
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 4.2e-82 310.1 651 69.3
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 9.3e-82 308.9 639 70.7
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 2.1e-81 307.8 531 78.3
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 2.3e-80 304.3 642 70.2
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 3.0e-80 303.9 639 69.3
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 7.4e-79 299.3 506 82.2
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 9.6e-79 298.9 641 69.0
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 2.8e-78 297.4 506 82.0
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 2.4e-77 294.3 553 76.9
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 6.5e-75 286.2 599 72.1
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 4.6e-73 280.0 672 66.1
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 4.6e-73 280.0 662 62.4
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 2.3e-72 277.7 529 77.7
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 5.7e-71 273.1 531 40.9
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 5.3e-69 266.5 584 58.6
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 2.9e-67 260.8 502 75.1
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 4.6e-65 253.4 275 56.0
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 7.4e-63 246.1 647 63.2
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 2.4e-61 241.1 749 56.5
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 1.5e-60 238.4 266 51.5
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 1.5e-60 238.4 273 53.5
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 1.4e-48 198.7 144 66.0
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 2.2e-46 191.4 548 67.2
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 4.8e-38 163.7 169 54.4
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 2.4e-37 161.4 196 61.2
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 3.1e-37 161.0 117 62.4
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 9.1e-37 159.5 199 50.3
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 4.0e-32 144.1 110 62.7
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 5.2e-32 143.7 80 90.0
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 5.2e-32 143.7 110 59.1
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 5.7e-31 140.2 80 87.5
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 1.6e-28 132.1 110 59.1
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 4.5e-28 130.6 114 52.6
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 4.7e-25 120.6 89 67.4
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 1.2e-23 115.9 193 45.6
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 6.3e-22 110.2 197 43.1
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 1.4e-21 109.0 128 48.4
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 3.6e-17 94.4 127 40.2
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 2.3e-16 91.7 117 44.4
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 2.2e-14 85.1 74 94.6
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 5.4e-13 80.5 112 38.4


User provided reference genes

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