Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 1.4e-103 379.8 218 100.0
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 1.6e-62 243.4 240 62.1
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 1.1e-55 220.7 221 60.2
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.9e-52 209.9 212 57.5
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 3.8e-48 195.7 143 72.7
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 9.3e-47 191.0 211 55.5
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 9.3e-47 191.0 194 57.2
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 1.6e-46 190.3 206 62.6
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 2.1e-46 189.9 212 61.3
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 1.8e-45 186.8 219 52.1
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 6.7e-45 184.9 210 53.3
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 3.7e-43 179.1 213 52.1
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 8.2e-43 177.9 214 51.4
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 5.3e-42 175.3 233 56.7
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 9.0e-42 174.5 251 46.6
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 3.4e-41 172.6 219 46.1
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 3.4e-41 172.6 212 50.9
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 5.9e-41 171.8 211 48.8
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 7.6e-41 171.4 211 47.9
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 1.0e-40 171.0 264 49.6
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 2.9e-40 169.5 209 52.2
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 3.8e-40 169.1 209 51.2
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 5.0e-40 168.7 220 45.9
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 1.1e-39 167.5 222 45.0
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 1.4e-39 167.2 214 50.0
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.5e-39 166.4 245 47.3
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 3.2e-39 166.0 218 48.6
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 5.5e-39 165.2 213 47.4
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 5.5e-39 165.2 222 51.8
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 7.2e-39 164.9 238 52.5
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 1.2e-38 164.1 196 50.0
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 1.2e-38 164.1 196 50.0
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 1.2e-38 164.1 240 46.2
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 1.2e-38 164.1 192 53.1
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 2.1e-38 163.3 216 46.3
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 2.7e-38 162.9 212 50.0
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 6.1e-38 161.8 210 49.0
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 1.0e-37 161.0 224 44.6
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 2.3e-37 159.8 225 44.4
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 3.0e-37 159.5 214 46.3
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 3.0e-37 159.5 236 41.9
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 5.7e-36 155.2 244 44.3
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 5.7e-36 155.2 252 47.6
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 9.7e-36 154.5 234 46.2
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 1.3e-35 154.1 227 48.9
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 2.8e-35 152.9 250 43.6
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 2.8e-35 152.9 242 47.1
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 3.7e-35 152.5 216 48.6
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 4.8e-35 152.1 229 44.5
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 6.3e-35 151.8 238 44.5
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 1.8e-34 150.2 209 51.2
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.4e-34 149.8 229 45.9
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 4.1e-34 149.1 217 47.5
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 4.1e-34 149.1 231 48.1
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 4.1e-34 149.1 216 46.3
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 4.1e-34 149.1 216 45.8
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 2.6e-33 146.4 230 50.9
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 3.4e-33 146.0 218 46.8
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 4.5e-33 145.6 209 43.5
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 4.5e-33 145.6 195 50.3
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 5.9e-33 145.2 209 44.5
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 1.7e-32 143.7 229 44.1
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 2.2e-32 143.3 216 44.9
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 2.9e-32 142.9 209 42.6
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 3.8e-32 142.5 262 40.1
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 8.5e-32 141.4 253 42.7
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 1.9e-31 140.2 215 46.0
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 2.5e-31 139.8 242 41.3
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 7.2e-31 138.3 229 43.2
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 1.6e-30 137.1 226 43.4
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 1.8e-29 133.7 201 53.7
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 6.7e-29 131.7 215 46.5
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 3.3e-28 129.4 238 42.4
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 4.4e-28 129.0 213 44.1
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 4.4e-28 129.0 192 45.8
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 7.4e-28 128.3 238 41.6
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 1.3e-27 127.5 191 44.0
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 2.4e-26 123.2 235 39.1
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 5.3e-26 122.1 211 41.2
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 6.9e-26 121.7 226 38.9
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 9.1e-26 121.3 125 52.8
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 9.1e-26 121.3 225 39.6
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 1.2e-25 120.9 208 41.8
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 2.6e-25 119.8 228 42.5
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 1.7e-24 117.1 230 39.6
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 5.0e-24 115.5 129 51.9
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 5.0e-24 115.5 129 51.9
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 1.1e-23 114.4 126 51.6
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 2.5e-23 113.2 207 40.1
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 1.6e-22 110.5 130 51.5
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 2.7e-22 109.8 212 39.2
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 3.0e-21 106.3 219 38.8
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 5.2e-21 105.5 210 38.1
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 2.6e-20 103.2 111 52.3
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 3.7e-19 99.4 223 35.0
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 1.1e-18 97.8 216 37.5
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 3.1e-18 96.3 88 55.7
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 4.1e-18 95.9 70 72.9
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.9e-15 87.0 64 68.8
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 5.3e-10 68.9 157 33.8
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 1.2e-09 67.8 164 35.4
Cfa006566 Carpinus fangiana HOM05D003924 ORTHO05D043563 5.0e-08 62.4 59 61.0
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 1.5e-07 60.8 172 32.0
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 2.1e-06 57.0 153 35.3


User provided reference genes

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