Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031841 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 3.7e-100 368.2 188 100.0
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 7.0e-75 284.3 174 82.2
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 1.9e-72 276.2 174 82.2
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 9.1e-67 257.3 184 73.9
vmacro13722 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 4.5e-66 255.0 193 69.4
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.5e-64 250.0 185 69.2
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 1.0e-62 243.8 169 71.6
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 6.8e-62 241.1 174 71.3
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 1.2e-61 240.4 174 69.5
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 2.0e-61 239.6 174 69.5
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 4.4e-61 238.4 165 73.3
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 6.3e-60 234.6 184 64.7
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 8.3e-60 234.2 197 64.0
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 8.3e-60 234.2 184 66.3
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 8.3e-60 234.2 174 69.0
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 1.8e-59 233.0 184 63.6
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 1.8e-59 233.0 184 64.1
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 4.1e-59 231.9 174 69.5
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 1.2e-58 230.3 180 66.1
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 3.5e-58 228.8 174 66.1
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 4.5e-58 228.4 174 68.4
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 5.9e-58 228.0 179 65.4
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 1.0e-57 227.3 208 59.1
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 1.3e-57 226.9 174 66.7
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 1.7e-57 226.5 183 61.7
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 1.7e-57 226.5 178 65.7
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 2.3e-57 226.1 174 67.2
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 2.3e-57 226.1 174 66.7
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 5.0e-57 224.9 174 64.9
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 5.0e-57 224.9 174 66.1
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 1.1e-56 223.8 173 65.9
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 1.1e-56 223.8 174 64.9
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 1.5e-56 223.4 174 64.9
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 4.3e-56 221.9 174 63.2
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 7.3e-56 221.1 178 62.4
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 9.5e-56 220.7 186 61.3
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.1e-55 219.5 174 65.5
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 3.6e-55 218.8 202 59.4
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 3.6e-55 218.8 175 65.7
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 6.1e-55 218.0 174 64.4
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 6.1e-55 218.0 180 64.4
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 8.0e-55 217.6 176 59.7
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 8.0e-55 217.6 183 60.7
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 8.0e-55 217.6 178 63.5
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 1.0e-54 217.2 169 66.9
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 1.0e-54 217.2 176 61.9
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 8.9e-54 214.2 174 62.6
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 1.2e-53 213.8 174 61.5
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 2.0e-53 213.0 173 61.3
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 2.0e-53 213.0 180 62.8
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 2.6e-53 212.6 174 60.9
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 4.4e-53 211.8 179 59.8
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 7.5e-53 211.1 172 65.1
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 7.5e-53 211.1 176 62.5
FAN10G4268 Fragaria x ananassa HOM05D004944 ORTHO05D005989 7.5e-53 211.1 177 65.0
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 1.3e-52 210.3 176 61.4
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 1.7e-52 209.9 183 61.7
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 1.7e-52 209.9 185 59.5
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 2.2e-52 209.5 174 62.6
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 4.9e-52 208.4 175 61.7
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 6.4e-52 208.0 152 67.8
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 2.4e-51 206.1 172 64.5
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 1.2e-50 203.8 175 60.6
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 4.6e-50 201.8 184 59.2
Peaxi162Scf00309g00015 Petunia axillaris HOM05D004944 ORTHO05D005989 5.9e-50 201.4 184 57.1
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 3.9e-49 198.7 197 56.3
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 5.0e-49 198.4 174 58.0
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 4.3e-48 195.3 197 55.8
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 5.6e-48 194.9 197 55.3
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 3.6e-47 192.2 121 75.2
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 1.8e-46 189.9 182 53.8
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 1.8e-46 189.9 146 63.0
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 3.1e-46 189.1 175 61.1
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 4.0e-46 188.7 175 58.9
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 2.0e-45 186.4 174 52.3
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 3.4e-45 185.7 186 53.8
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.3e-44 183.7 180 54.4
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 4.9e-44 181.8 174 54.6
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 1.9e-43 179.9 164 57.3
Ca_04546_v3 Cicer arietinum L. HOM05D004944 ORTHO05D005989 7.0e-43 177.9 174 55.7
Lj9A645G78 Lonicera japonica HOM05D004944 ORTHO05D005989 1.6e-42 176.8 146 67.1
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 1.9e-40 169.9 174 56.3
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 2.5e-40 169.5 119 68.9
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.2e-39 167.2 174 54.0
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 2.1e-39 166.4 119 68.9
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 2.1e-39 166.4 119 68.9
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 4.7e-39 165.2 118 67.8
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 8.1e-39 164.5 118 67.8
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 8.1e-39 164.5 114 69.3
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 8.1e-39 164.5 116 67.2
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 1.1e-38 164.1 116 68.1
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 1.8e-38 163.3 171 54.4
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 1.8e-38 163.3 119 67.2
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 1.8e-38 163.3 119 67.2
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 1.8e-38 163.3 119 67.2
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 1.8e-38 163.3 116 69.0
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 2.3e-38 162.9 116 68.1
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 3.1e-38 162.5 118 65.3
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 8.9e-38 161.0 121 67.8
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 1.2e-37 160.6 174 49.4
ATR0721G017 Amborella trichopoda HOM05D004944 ORTHO05D005989 2.4e-35 152.9 120 63.3
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 2.4e-35 152.9 116 65.5
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.6e-34 150.2 139 59.0
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 7.8e-34 147.9 116 62.1
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 8.6e-33 144.4 146 52.1
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 8.6e-33 144.4 163 52.1
SHI03969 Sapria himalayana HOM05D004944 ORTHO05D005989 1.4e-30 137.1 106 63.2
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 2.2e-28 129.8 115 60.0
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 3.8e-28 129.0 117 56.4
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 2.4e-27 126.3 107 61.7
Sp5g22360 Schrenkiella parvula HOM05D004944 ORTHO05D005989 3.2e-27 125.9 92 67.4
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 1.5e-24 117.1 165 41.2
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 3.9e-17 92.4 218 33.5
FAN01G1245 Fragaria x ananassa HOM05D004944 ORTHO05D005989 4.8e-15 85.5 48 87.5
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 4.0e-14 82.4 90 51.1
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 1.2e-10 70.9 71 52.1
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 2.7e-10 69.7 120 39.2
SHI03973 Sapria himalayana HOM05D004944 ORTHO05D005989 2.8e-07 59.7 85 40.0


User provided reference genes

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