Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031726 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 3.6e-158 561.6 296 100.0
CSS0008072 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 3.2e-106 389.0 287 69.0
GSVIVG01024470001 Vitis vinifera HOM05D005564 ORTHO05D006872 6.4e-99 364.8 251 70.9
vmacro19959 Vaccinium macrocarpon HOM05D005564 ORTHO05D006872 9.2e-98 360.9 265 66.8
Cfa013601 Carpinus fangiana HOM05D005564 ORTHO05D006872 1.6e-97 360.1 254 71.3
Potri.015G111628 Populus trichocarpa HOM05D005564 ORTHO05D006872 1.9e-95 353.2 293 62.5
CiPaw.07G183300 Carya illinoinensis HOM05D005564 ORTHO05D006872 4.7e-94 348.6 232 72.8
Manes.06G130000 Manihot esculenta HOM05D005564 ORTHO05D006872 4.7e-94 348.6 254 66.9
Sabra15G0133100 Salix brachista HOM05D005564 ORTHO05D006872 6.2e-94 348.2 291 60.8
Lj8A49G34 Lonicera japonica HOM05D005564 ORTHO05D006872 8.1e-94 347.8 257 67.3
Duzib084G1177 Durio zibethinus HOM05D005564 ORTHO05D006872 1.1e-93 347.4 285 63.5
QL09p027441 Quercus lobata HOM05D005564 ORTHO05D006872 1.4e-93 347.1 247 70.0
TWI39G1038 Tripterygium wilfordii HOM05D005564 ORTHO05D006872 2.4e-93 346.3 254 67.3
Dinv34536 Davidia involucrata HOM05D005564 ORTHO05D006872 3.1e-93 345.9 243 70.4
Thecc.03G145600 Theobroma cacao HOM05D005564 ORTHO05D006872 6.9e-93 344.7 255 67.5
Atru.chr6.1979 Acer truncatum HOM05D005564 ORTHO05D006872 1.2e-92 344.0 247 69.6
Atru.chr6.2007 Acer truncatum HOM05D005564 ORTHO05D006872 1.2e-92 344.0 247 69.6
Hma1.2p1_1014F.1_g247960 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 1.2e-92 344.0 259 65.6
Hma1.2p1_1305F.1_g274526 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 1.2e-92 344.0 259 65.6
Haze_22223 Corylus avellana HOM05D005564 ORTHO05D006872 1.5e-92 343.6 253 69.6
Gohir.D07G048900 Gossypium hirsutum HOM05D005564 ORTHO05D006872 2.0e-92 343.2 286 62.2
Gorai.001G052100 Gossypium raimondii HOM05D005564 ORTHO05D006872 2.6e-92 342.8 286 61.9
Gorai.007G289400 Gossypium raimondii HOM05D005564 ORTHO05D006872 4.4e-92 342.0 255 66.3
Gohir.A13G032000 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.3e-91 340.5 286 62.2
TAR629G2772 Trochodendron aralioides HOM05D005564 ORTHO05D006872 1.3e-91 340.5 254 66.9
FvH4_7g26720 Fragaria vesca HOM05D005564 ORTHO05D006872 2.9e-91 339.3 258 65.1
Cpa.g.sc13.231 Carica papaya HOM05D005564 ORTHO05D006872 8.4e-91 337.8 260 66.5
MD07G1241800 Malus domestica HOM05D005564 ORTHO05D006872 8.4e-91 337.8 285 66.0
Oeu030874.1 Olea europaea HOM05D005564 ORTHO05D006872 1.9e-90 336.7 254 63.8
Prupe.2G270700 Prunus persica HOM05D005564 ORTHO05D006872 1.9e-90 336.7 253 66.4
MD07G1243700 Malus domestica HOM05D005564 ORTHO05D006872 3.2e-90 335.9 286 65.4
TPR.G39148 Trifolium pratense HOM05D005564 ORTHO05D006872 4.6e-89 332.0 258 64.0
Medtr0053s0020 Medicago truncatula HOM05D005564 ORTHO05D006872 6.0e-89 331.6 250 64.8
Gorai.005G129900 Gossypium raimondii HOM05D005564 ORTHO05D006872 7.8e-89 331.3 255 65.1
HanXRQChr08g0221891 Helianthus annuus HOM05D005564 ORTHO05D006872 1.0e-88 330.9 248 66.9
Ciclev10032148m.g Citrus clementina HOM05D005564 ORTHO05D006872 2.3e-88 329.7 233 67.4
HanXRQChr08g0223121 Helianthus annuus HOM05D005564 ORTHO05D006872 5.1e-88 328.6 248 66.5
CANSAT56G0249 Cannabis sativa HOM05D005564 ORTHO05D006872 8.7e-88 327.8 241 66.8
Nn6g33765 Nelumbo nucifera HOM05D005564 ORTHO05D006872 1.1e-87 327.4 244 66.4
Migut.F00541 Erythranthe guttata HOM05D005564 ORTHO05D006872 1.9e-87 326.6 289 59.9
Hund18321 Selenicereus undatus HOM05D005564 ORTHO05D006872 2.5e-87 326.2 236 66.5
Cc00_g13030 Coffea canephora HOM05D005564 ORTHO05D006872 4.3e-87 325.5 244 64.3
Lj1g0017373 Lotus japonicus HOM05D005564 ORTHO05D006872 4.3e-87 325.5 288 57.3
Lalb_Chr19g0127411 Lupinus albus HOM05D005564 ORTHO05D006872 4.3e-87 325.5 250 64.0
THA.LOC104825050 Tarenaya hassleriana HOM05D005564 ORTHO05D006872 1.6e-86 323.6 256 63.3
Glyma.01G079300 Glycine max HOM05D005564 ORTHO05D006872 2.8e-86 322.8 250 63.6
VMungo1383G3643 Vigna mungo HOM05D005564 ORTHO05D006872 2.8e-86 322.8 252 64.7
CAN.G309.23 Capsicum annuum HOM05D005564 ORTHO05D006872 8.1e-86 321.2 248 63.7
Nitab4.5_0003973g0040 Nicotiana tabacum HOM05D005564 ORTHO05D006872 1.1e-85 320.9 254 62.2
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 2.4e-85 319.7 274 62.0
COL.COLO4_37310 Corchorus olitorius HOM05D005564 ORTHO05D006872 5.3e-85 318.5 257 65.4
Eucgr.A02932 Eucalyptus grandis HOM05D005564 ORTHO05D006872 9.0e-85 317.8 254 60.6
PGSC0003DMG400008328 Solanum tuberosum HOM05D005564 ORTHO05D006872 1.2e-84 317.4 247 61.9
Phvul.008G143300 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 2.6e-84 316.2 249 61.8
Phvul.005G030000 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 7.6e-84 314.7 251 62.9
Ca_27086_v3 Cicer arietinum L. HOM05D005564 ORTHO05D006872 3.8e-83 312.4 242 64.0
Sed0010204 Sechium edule HOM05D005564 ORTHO05D006872 3.8e-83 312.4 226 68.1
Sopen03g024760 Solanum pennellii HOM05D005564 ORTHO05D006872 3.8e-83 312.4 247 61.9
SGA_v2.0_scaffold60G20845 Striga asiatica HOM05D005564 ORTHO05D006872 3.8e-83 312.4 253 60.5
Ah.08g213710 Amaranthus hybridus HOM05D005564 ORTHO05D006872 4.9e-83 312.0 238 64.3
Sp6g13380 Schrenkiella parvula HOM05D005564 ORTHO05D006872 1.1e-82 310.8 257 61.5
Solyc03g093880.3 Solanum lycopersicum HOM05D005564 ORTHO05D006872 1.1e-82 310.8 247 61.5
MD01G1175500 Malus domestica HOM05D005564 ORTHO05D006872 1.4e-82 310.5 226 65.9
Aa31LG3G7670 Aethionema arabicum HOM05D005564 ORTHO05D006872 5.4e-82 308.5 259 58.7
BraSC35t46004Z Brassica rapa HOM05D005564 ORTHO05D006872 9.3e-82 307.8 293 55.3
ClCG01G004820 Citrullus lanatus HOM05D005564 ORTHO05D006872 9.3e-82 307.8 254 60.2
EL10Ac7g17720 Beta vulgaris HOM05D005564 ORTHO05D006872 1.6e-81 307.0 305 53.4
A10p07960 Brassica napus HOM05D005564 ORTHO05D006872 2.1e-81 306.6 293 54.9
CsaV3_5G005020 Cucumis sativus L. HOM05D005564 ORTHO05D006872 2.1e-81 306.6 254 61.0
arahy.Tifrunner.gnm1.ann1.2T0BFY Arachis hypogaea HOM05D005564 ORTHO05D006872 2.7e-81 306.2 250 60.4
Gohir.A07G044400 Gossypium hirsutum HOM05D005564 ORTHO05D006872 3.5e-81 305.8 258 59.7
Carub.0008s1121 Capsella rubella HOM05D005564 ORTHO05D006872 4.6e-81 305.4 257 60.3
C09p39850 Brassica napus HOM05D005564 ORTHO05D006872 6.0e-81 305.1 293 54.9
Thhalv10014247m.g Eutrema salsugineum HOM05D005564 ORTHO05D006872 7.9e-81 304.7 259 59.5
FAN06G0976 Fragaria x ananassa HOM05D005564 ORTHO05D006872 7.9e-81 304.7 230 65.2
AT5G51170 Arabidopsis thaliana HOM05D005564 ORTHO05D006872 1.3e-80 303.9 288 55.6
BcaC04g20726 Brassica carinata HOM05D005564 ORTHO05D006872 1.3e-80 303.9 293 54.6
BolC9t56884H Brassica oleracea HOM05D005564 ORTHO05D006872 1.3e-80 303.9 293 54.6
FAN03G1301 Fragaria x ananassa HOM05D005564 ORTHO05D006872 1.3e-80 303.9 230 65.2
DCAR_020165 Daucus carota HOM05D005564 ORTHO05D006872 2.3e-80 303.1 260 60.0
CARHR256880 Cardamine hirsuta HOM05D005564 ORTHO05D006872 1.1e-79 300.8 254 60.2
PSO063G5398 Papaver somniferum HOM05D005564 ORTHO05D006872 1.1e-79 300.8 249 57.4
PGR042G2925 Punica granatum HOM05D005564 ORTHO05D006872 1.1e-79 300.8 252 59.5
Gorai.013G121700 Gossypium raimondii HOM05D005564 ORTHO05D006872 1.5e-79 300.4 258 60.9
AL8G25430 Arabidopsis lyrata HOM05D005564 ORTHO05D006872 3.3e-79 299.3 257 59.1
SalBow3G4594 Salvia bowleyana HOM05D005564 ORTHO05D006872 4.3e-79 298.9 254 59.4
ECA233G5472 Erigeron canadensis HOM05D005564 ORTHO05D006872 5.6e-79 298.5 235 63.8
VMungo1080G0069 Vigna mungo HOM05D005564 ORTHO05D006872 5.6e-79 298.5 290 54.1
MSTRG.27230 Avicennia marina HOM05D005564 ORTHO05D006872 2.1e-78 296.6 254 57.9
Peaxi162Scf00073g01727 Petunia axillaris HOM05D005564 ORTHO05D006872 2.1e-78 296.6 254 57.5
BcaB08g35471 Brassica carinata HOM05D005564 ORTHO05D006872 2.8e-78 296.2 294 53.4
PSO017G2767 Papaver somniferum HOM05D005564 ORTHO05D006872 3.1e-77 292.7 228 60.1
MD07G1244900 Malus domestica HOM05D005564 ORTHO05D006872 5.3e-77 292.0 205 69.8
CDE02G1506 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 6.9e-77 291.6 249 57.8
ClCG09G010750 Citrullus lanatus HOM05D005564 ORTHO05D006872 4.9e-75 285.4 239 59.8
Rhsim03G0157100 Rhododendron simsii HOM05D005564 ORTHO05D006872 4.9e-75 285.4 238 62.6
PSO782G4004 Papaver somniferum HOM05D005564 ORTHO05D006872 1.2e-73 280.8 249 55.0
AUR62025416 Chenopodium quinoa HOM05D005564 ORTHO05D006872 2.1e-73 280.0 212 64.2
AUR62008825 Chenopodium quinoa HOM05D005564 ORTHO05D006872 2.7e-73 279.6 207 65.7
SHI14145 Sapria himalayana HOM05D005564 ORTHO05D000001 7.9e-73 278.1 232 58.6
RcHm_v2.0_Chr1g0373311 Rosa chinensis HOM05D005564 ORTHO05D006872 7.4e-71 271.6 192 68.2
FAN01G2799 Fragaria x ananassa HOM05D005564 ORTHO05D006872 1.2e-68 264.2 232 57.8
FAN10G0633 Fragaria x ananassa HOM05D005564 ORTHO05D006872 3.2e-66 256.1 192 65.6
Zm00001eb249040 Zea mays HOM05D005564 ORTHO05D006872 1.6e-65 253.8 250 51.2
ATR0188G007 Amborella trichopoda HOM05D005564 ORTHO05D006872 3.5e-65 252.7 287 49.5
MELO3C005454.2 Cucumis melo HOM05D005564 ORTHO05D006872 6.3e-62 241.9 190 65.8
unitig_21.g20780 Utricularia gibba HOM05D005564 ORTHO05D006872 3.4e-60 236.1 220 55.9
SEGI_35477 Sequoiadendron giganteum HOM05D005564 ORTHO05D006872 9.7e-55 218.0 215 51.2
Hma1.2p1_1014F.1_g247920 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 6.3e-54 215.3 181 58.0
Sc19g0002740 Simmondsia chinensis HOM05D005564 ORTHO05D006872 1.2e-52 211.1 176 59.7
Os02g0651000 Oryza sativa ssp. japonica HOM05D005564 ORTHO05D006872 1.5e-52 210.7 189 54.5
MD07G1243300 Malus domestica HOM05D005564 ORTHO05D006872 1.3e-51 207.6 229 57.6
Gorai.006G046400 Gossypium raimondii HOM05D005564 ORTHO05D006872 5.0e-51 205.7 138 71.7
Nn6g32633 Nelumbo nucifera HOM05D005564 ORTHO05D006872 6.5e-51 205.3 161 63.4
MD07G1245400 Malus domestica HOM05D005564 ORTHO05D006872 1.4e-50 204.1 149 68.5
Nitab4.5_0000103g0380 Nicotiana tabacum HOM05D005564 ORTHO05D006872 1.9e-50 203.8 167 61.1
SMO145G0164 Selaginella moellendorffii HOM05D005564 ORTHO05D006872 1.9e-50 203.8 256 41.0
Medtr0092s0090 Medicago truncatula HOM05D005564 ORTHO05D006872 2.5e-50 203.4 166 62.0
CANSAT78G0945 Cannabis sativa HOM05D005564 ORTHO05D006872 5.5e-50 202.2 217 50.2
Rhsim03G0158000 Rhododendron simsii HOM05D005564 ORTHO05D006872 3.0e-48 196.4 250 48.0
AagrBONN_evm.TU.Sc2ySwM_228.2399 Anthoceros agrestis HOM05D005564 ORTHO05D006872 9.7e-47 191.4 217 42.4
Dinv34539 Davidia involucrata HOM05D005564 ORTHO05D006872 2.2e-43 180.3 239 46.4
Aqoxy3G02663 Aquilegia oxysepala HOM05D005564 ORTHO05D006872 6.5e-43 178.7 127 65.4
CAN.G1016.1 Capsicum annuum HOM05D005564 ORTHO05D006872 3.3e-39 166.4 121 65.3
Gohir.D02G135666 Gossypium hirsutum HOM05D005564 ORTHO05D006872 3.3e-39 166.4 109 69.7
arahy.Tifrunner.gnm1.ann1.R6MN5Z Arachis hypogaea HOM05D005564 ORTHO05D006872 2.2e-38 163.7 239 41.0
Pp3c13_1340 Physcomitrium patens HOM05D005564 ORTHO05D006872 2.2e-38 163.7 187 47.1
Lsat_1_v5_gn_8_13861 Lactuca sativa HOM05D000071 ORTHO05D006872 2.8e-38 163.3 119 65.5
Prupe.4G133000 Prunus persica HOM05D005564 ORTHO05D006872 1.2e-36 157.9 170 52.9
CDE11G0070 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 1.7e-35 154.1 118 62.7
Gohir.D02G130966 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.2e-28 131.3 112 58.9
Nn6g32636 Nelumbo nucifera HOM05D005564 ORTHO05D006872 3.5e-28 129.8 85 71.8
CBR_g31024 Chara braunii HOM05D005564 ORTHO05D006872 4.5e-28 129.4 275 33.8
Psat3g166160 Pisum sativum HOM05D005564 ORTHO05D006872 2.6e-23 113.6 167 41.3
Psat3g164240 Pisum sativum HOM05D005564 ORTHO05D006872 1.6e-20 104.4 149 43.0
MCO11G677 Micromonas commoda HOM05D005564 ORTHO05D006872 4.4e-15 86.3 203 30.5
Cre01.g041900 Chlamydomonas reinhardtii HOM05D005564 ORTHO05D006872 5.7e-15 85.9 199 28.6
Mapoly0036s0004 Marchantia polymorpha HOM05D005564 ORTHO05D006872 2.8e-14 83.6 137 37.2


User provided reference genes

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