Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025118 Camellia sinensis var. sinensis HOM05D002606 ORTHO05D003016 1.2e-35 152.5 71 100.0
CSS0029539 Camellia sinensis var. sinensis HOM05D002606 ORTHO05D003016 1.2e-35 152.5 71 100.0
CSS0044402 Camellia sinensis var. sinensis HOM05D002606 ORTHO05D003016 1.0e-34 149.4 71 98.6
CSS0030829 Camellia sinensis var. sinensis HOM05D002606 ORTHO05D003016 3.8e-34 147.5 71 97.2
CSS0022111 Camellia sinensis var. sinensis HOM05D002606 ORTHO05D003016 8.6e-26 119.8 68 86.8
Dinv24630 Davidia involucrata HOM05D002606 ORTHO05D003016 2.2e-21 105.1 68 73.5
Sabra15G0063300 Salix brachista HOM05D002606 ORTHO05D003016 2.9e-21 104.8 68 73.5
vmacro16425 Vaccinium macrocarpon HOM05D002606 ORTHO05D003016 4.9e-21 104.0 68 75.0
Rhsim12G0139800 Rhododendron simsii HOM05D002606 ORTHO05D003016 8.3e-21 103.2 68 76.5
Sabra15G0055700 Salix brachista HOM05D002606 ORTHO05D003016 1.1e-20 102.8 68 72.1
ECA233G1730 Erigeron canadensis HOM05D002606 ORTHO05D003016 1.4e-20 102.4 68 73.5
Gorai.006G057100 Gossypium raimondii HOM05D002606 ORTHO05D003016 1.4e-20 102.4 68 73.5
GSVIVG01008397001 Vitis vinifera HOM05D002606 ORTHO05D003016 1.4e-20 102.4 68 70.6
Gohir.A09G051500 Gossypium hirsutum HOM05D002606 ORTHO05D003016 2.4e-20 101.7 68 73.5
Gohir.D09G052500 Gossypium hirsutum HOM05D002606 ORTHO05D003016 2.4e-20 101.7 68 73.5
HanXRQChr03g0087021 Helianthus annuus HOM05D002606 ORTHO05D003016 2.4e-20 101.7 68 73.5
Atru.chr9.1768 Acer truncatum HOM05D002606 ORTHO05D003016 2.7e-19 98.2 69 66.7
Cc04_g06600 Coffea canephora HOM05D002606 ORTHO05D003016 2.7e-19 98.2 68 69.1
COL.COLO4_22314 Corchorus olitorius HOM05D002606 ORTHO05D003016 2.7e-19 98.2 68 69.1
Haze_18795 Corylus avellana HOM05D002606 ORTHO05D003016 4.6e-19 97.4 68 67.6
Peaxi162Scf00683g00215 Petunia axillaris HOM05D002606 ORTHO05D003016 4.6e-19 97.4 68 69.1
QL10p027611 Quercus lobata HOM05D002606 ORTHO05D003016 4.6e-19 97.4 68 70.6
MD14G1234100 Malus domestica HOM05D002606 ORTHO05D003016 6.0e-19 97.1 68 70.6
Thecc.03G047600 Theobroma cacao HOM05D002606 ORTHO05D003016 7.8e-19 96.7 68 70.6
ClCG04G010770 Citrullus lanatus HOM05D002606 ORTHO05D003016 1.3e-18 95.9 68 67.6
Cpa.g.sc3.434 Carica papaya HOM05D002606 ORTHO05D003016 1.7e-18 95.5 68 70.6
CsaV3_1G007030 Cucumis sativus L. HOM05D002606 ORTHO05D003016 1.7e-18 95.5 68 66.2
Eucgr.B00858 Eucalyptus grandis HOM05D002606 ORTHO05D003016 1.7e-18 95.5 68 67.6
DCAR_014772 Daucus carota HOM05D002606 ORTHO05D003016 2.3e-18 95.1 68 69.1
Lsat_1_v5_gn_8_1440 Lactuca sativa HOM05D002606 ORTHO05D003016 2.3e-18 95.1 68 69.1
Prupe.5G230300 Prunus persica HOM05D002606 ORTHO05D003016 2.3e-18 95.1 68 69.1
Duzib205G1612 Durio zibethinus HOM05D002606 ORTHO05D003016 3.0e-18 94.7 68 67.6
Sed0024498 Sechium edule HOM05D002606 ORTHO05D003016 3.9e-18 94.4 68 64.7
Sopen03g037960 Solanum pennellii HOM05D002606 ORTHO05D003016 3.9e-18 94.4 68 66.2
PGSC0003DMG400005737 Solanum tuberosum HOM05D002606 ORTHO05D003016 3.9e-18 94.4 68 66.2
TWI81G0397 Tripterygium wilfordii HOM05D002606 ORTHO05D003016 3.9e-18 94.4 68 67.6
CAN.G1129.26 Capsicum annuum HOM05D002606 ORTHO05D003016 6.6e-18 93.6 68 64.7
PGR083G1787 Punica granatum HOM05D002606 ORTHO05D003016 6.6e-18 93.6 68 67.6
TAR629G1583 Trochodendron aralioides HOM05D002606 ORTHO05D003016 6.6e-18 93.6 68 70.6
CANSAT80G0481 Cannabis sativa HOM05D002606 ORTHO05D003016 8.6e-18 93.2 69 68.1
CiPaw.16G091200 Carya illinoinensis HOM05D002606 ORTHO05D003016 8.6e-18 93.2 68 66.2
Nitab4.5_0001158g0110 Nicotiana tabacum HOM05D002606 ORTHO05D003016 8.6e-18 93.2 68 64.7
Oeu005547.1 Olea europaea HOM05D002606 ORTHO05D003016 8.6e-18 93.2 68 66.2
Cfa019693 Carpinus fangiana HOM05D002606 ORTHO05D003016 1.1e-17 92.8 68 66.2
Nitab4.5_0001644g0030 Nicotiana tabacum HOM05D002606 ORTHO05D003016 1.1e-17 92.8 68 64.7
Solyc03g119070.2 Solanum lycopersicum HOM05D002606 ORTHO05D003016 1.1e-17 92.8 68 66.2
MELO3C002121.2 Cucumis melo HOM05D002606 ORTHO05D003016 1.5e-17 92.4 67 65.7
Migut.I00455 Erythranthe guttata HOM05D002606 ORTHO05D003016 1.5e-17 92.4 69 63.8
FAN08G0509 Fragaria x ananassa HOM05D002606 ORTHO05D003016 1.5e-17 92.4 68 64.7
RcHm_v2.0_Chr7g0178771 Rosa chinensis HOM05D002606 ORTHO05D003016 1.5e-17 92.4 68 64.7
Ciclev10007863m.g Citrus clementina HOM05D002606 ORTHO05D003016 2.5e-17 91.7 68 64.7
Manes.14G169100 Manihot esculenta HOM05D002606 ORTHO05D003016 2.5e-17 91.7 68 66.2
FAN04G2084 Fragaria x ananassa HOM05D002606 ORTHO05D003016 3.3e-17 91.3 68 61.8
Atru.chr9.958 Acer truncatum HOM05D002606 ORTHO05D003016 4.3e-17 90.9 68 64.7
Phvul.004G151700 Phaseolus vulgaris HOM05D002606 ORTHO05D003016 7.3e-17 90.1 68 64.7
FvH4_5g17080 Fragaria vesca HOM05D002606 ORTHO05D003016 1.2e-16 89.4 68 60.3
Hund02332 Selenicereus undatus HOM05D002606 ORTHO05D003016 1.2e-16 89.4 68 66.2
Nn3g18593 Nelumbo nucifera HOM05D002606 ORTHO05D003016 3.6e-16 87.8 68 61.8
THA.LOC104813917 Tarenaya hassleriana HOM05D002606 ORTHO05D003016 4.7e-16 87.4 68 60.3
Aa31LG7G2980 Aethionema arabicum HOM05D002606 ORTHO05D003016 8.1e-16 86.7 68 55.9
AUR62029960 Chenopodium quinoa HOM05D002606 ORTHO05D003016 1.1e-15 86.3 68 60.3
AUR62033741 Chenopodium quinoa HOM05D002606 ORTHO05D003016 1.1e-15 86.3 68 60.3
ATR0686G055 Amborella trichopoda HOM05D002606 ORTHO05D003016 1.4e-15 85.9 68 63.2
C08p18420 Brassica napus HOM05D002606 ORTHO05D003016 1.4e-15 85.9 68 54.4
BolC8t49472H Brassica oleracea HOM05D002606 ORTHO05D003016 1.4e-15 85.9 68 54.4
EL10Ac5g11524 Beta vulgaris HOM05D002606 ORTHO05D003016 1.8e-15 85.5 63 63.5
Lalb_Chr24g0398041 Lupinus albus HOM05D002606 ORTHO05D003016 2.3e-15 85.1 68 63.2
AL1G30470 Arabidopsis lyrata HOM05D002606 ORTHO05D003016 3.1e-15 84.7 68 52.9
A08p30550 Brassica napus HOM05D002606 ORTHO05D003016 4.0e-15 84.3 68 52.9
BraA08t34987Z Brassica rapa HOM05D002606 ORTHO05D003016 4.0e-15 84.3 68 52.9
Lj2g0015801 Lotus japonicus HOM05D002606 ORTHO05D003016 4.0e-15 84.3 68 61.8
Medtr0110s0050 Medicago truncatula HOM05D002606 ORTHO05D003016 4.0e-15 84.3 68 60.3
Sp1g16110 Schrenkiella parvula HOM05D002606 ORTHO05D003016 4.0e-15 84.3 68 52.9
Aqoxy3G04014 Aquilegia oxysepala HOM05D002606 ORTHO05D003016 5.2e-15 84.0 78 57.7
AT1G18090 Arabidopsis thaliana HOM05D002606 ORTHO05D003016 8.9e-15 83.2 67 53.7
Thhalv10007197m.g Eutrema salsugineum HOM05D002606 ORTHO05D003016 8.9e-15 83.2 68 52.9
Glyma.07G100600 Glycine max HOM05D002606 ORTHO05D003016 8.9e-15 83.2 68 60.3
VMungo0464G0918 Vigna mungo HOM05D002606 ORTHO05D003016 8.9e-15 83.2 68 61.8
arahy.Tifrunner.gnm1.ann1.CMXS5I Arachis hypogaea HOM05D002606 ORTHO05D003016 2.0e-14 82.0 68 61.8
arahy.Tifrunner.gnm1.ann1.NX7DWE Arachis hypogaea HOM05D002606 ORTHO05D003016 2.0e-14 82.0 68 61.8
Carub.0001s1776 Capsella rubella HOM05D002606 ORTHO05D003016 2.6e-14 81.6 68 51.5
Psat1g032440 Pisum sativum HOM05D002606 ORTHO05D003016 4.4e-14 80.9 68 57.4
Sc10g0009290 Simmondsia chinensis HOM05D002606 ORTHO05D003016 7.5e-14 80.1 69 62.3
CARHR018680 Cardamine hirsuta HOM05D002606 ORTHO05D003016 9.9e-14 79.7 68 50.0
TPR.G1475 Trifolium pratense HOM05D002606 ORTHO05D003016 9.9e-14 79.7 68 57.4
Lj5C154T18 Lonicera japonica HOM05D002606 ORTHO05D003016 2.2e-13 78.6 63 61.9
AagrBONN_evm.TU.Sc2ySwM_362.488 Anthoceros agrestis HOM05D002606 ORTHO05D003016 2.4e-12 75.1 77 51.9
Mapoly0058s0059 Marchantia polymorpha HOM05D002606 ORTHO05D003016 9.5e-09 63.2 71 43.7
Actinidia37421 Actinidia chinensis HOM05D002606 ORTHO05D003016 1.2e-06 56.2 43 62.8
Atru.chr9.1770 Acer truncatum HOM05D002606 ORTHO05D003016 2.0e-06 55.5 48 54.2
AUR62027619 Chenopodium quinoa HOM05D002606 ORTHO05D003016 2.0e-06 55.5 72 34.7
AUR62035823 Chenopodium quinoa HOM05D002606 ORTHO05D003016 4.4e-06 54.3 72 34.7


User provided reference genes

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